Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A24
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   4.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   4.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   7.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.6  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 515 VSSSS*NCRTLYTCFLESF 459
           VSSSS NC  L++  ++ F
Sbjct: 232 VSSSSYNCEVLFSFLIDQF 250


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 400 CCRILLLREPLLQQYHC*SP 341
           CCR   LRE  +   HC  P
Sbjct: 83  CCRESFLRERTITLTHCYDP 102


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 467 PRNMYTEFCSFMKRS*HRW 523
           P+ MYT    F++   HRW
Sbjct: 70  PKAMYTVLLEFVQIDPHRW 88


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 663 LSQQIVQKCCSKKA 704
           LS+Q +  CCSKK+
Sbjct: 99  LSKQEIFNCCSKKS 112


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 521 WFPQCQMVGNLNN*SILVHSITMAMMNMQSS 613
           WF QC +VG +   S L     MA+ ++  S
Sbjct: 232 WFMQCDVVGKVA--SQLAEDFQMALKHVGPS 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,620
Number of Sequences: 336
Number of extensions: 4086
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)