Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A24
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              25   0.69 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.6  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   2.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   2.1  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   4.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   4.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   6.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.5  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 98  SSIKSLQSICSAIAYQRPNLKDS 30
           +S+K L S CS I+ + P+LK S
Sbjct: 95  NSVKQLVSDCSTISEENPHLKAS 117


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 37  LRFGLWYAMAEHIDCSDFMEE 99
           L++  W  ++  I+CSD +EE
Sbjct: 270 LKYNTWEPISNLINCSDILEE 290


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 10  PYRXXYRESLRFGLWYAMAEHIDCSDFME 96
           PY     E+  + L+ AMA H   S+F E
Sbjct: 762 PYGMELTEAEHYALYTAMAPHATASEFDE 790


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 67  PPSRTKDQILRIPYRXIGK 11
           PPSR  D+ LR+P + + K
Sbjct: 237 PPSRPTDKALRLPLQDVYK 255


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 562 INIGSQYNYGNDEHAEFLCVVSRECV 639
           +N   Q+  G++  AEF+C+ + E +
Sbjct: 177 VNDVVQHQSGSEAEAEFVCIATPEAI 202


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 67  PPSRTKDQILRIPYRXIGK 11
           PP+R  D+ LR+P + + K
Sbjct: 180 PPTRPTDKALRLPLQDVYK 198


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 67  PPSRTKDQILRIPYRXIGK 11
           PP+R  D+ LR+P + + K
Sbjct: 237 PPTRPTDKALRLPLQDVYK 255


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/59 (18%), Positives = 25/59 (42%)
 Frame = +1

Query: 442 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 618
           RER       +  YR  +   +E ++         + + + ++ + YNY N+ + +  C
Sbjct: 43  REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/59 (18%), Positives = 25/59 (42%)
 Frame = +1

Query: 442 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 618
           RER       +  YR  +   +E ++         + + + ++ + YNY N+ + +  C
Sbjct: 43  REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/59 (18%), Positives = 25/59 (42%)
 Frame = +1

Query: 442 RERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLC 618
           RER       +  YR  +   +E ++         + + + ++ + YNY N+ + +  C
Sbjct: 43  REREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYC 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,015
Number of Sequences: 438
Number of extensions: 4840
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)