Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A22
         (982 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   1.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   6.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 538 PLERYPTPIVKDEPQTVPSAASTPPLSPI 624
           P  +YP PI+  E   V ++  TP + P+
Sbjct: 168 PAGQYPYPILSPEMSQVAASWHTPSMYPL 196


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 538 PLERYPTPIVKDEPQTVPSAASTPPLSPI 624
           P  +YP PI+  E   V ++  TP + P+
Sbjct: 60  PAGQYPYPILSPEMSQVAASWHTPSMYPL 88


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 277 VNVSHPAQHPRLGAF*GFPQG 215
           V+  HP QH   GA    PQG
Sbjct: 19  VSAEHPHQHQHYGAAVQVPQG 39


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 277 VNVSHPAQHPRLGAF*GFPQG 215
           V+  HP QH   GA    PQG
Sbjct: 19  VSAEHPHQHQHYGAAVQVPQG 39


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 601 WPRSAPSGARPSRWEWGIALAACPNRHI 518
           +PR   S   P +W W      C  RHI
Sbjct: 45  YPRQKKS--HPPQWTWQCINQRCERRHI 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -1

Query: 172  CGRNSEPCVCTERFGITELTTRTL*LFPTINTRPPS 65
            CG    P + T R  + +  T      P I+  PPS
Sbjct: 1749 CGEGRHPLLTTIRNVLADAGTGQQETIPPIDEEPPS 1784


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 182 PPSMTSNILSAALWKTLKGP*PWMLGGVGNVHESLHPF 295
           P  +T   + AA  K    P     GG  ++H S++PF
Sbjct: 221 PTDLTPEQIQAAEVKDFPSP-----GGFPSIHNSINPF 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,076
Number of Sequences: 336
Number of extensions: 3718
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27823477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)