Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A18
(875 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 107 2e-23
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 77 2e-14
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 52 6e-07
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 35 0.075
SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 32 0.70
SB_46930| Best HMM Match : PWWP (HMM E-Value=0.017) 32 0.70
SB_47537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18) 31 1.2
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 31 1.6
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 30 2.8
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_39716| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 29 3.7
SB_10218| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 4.9
SB_7073| Best HMM Match : ResIII (HMM E-Value=0.083) 29 4.9
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 29 6.5
SB_40233| Best HMM Match : Ion_trans_2 (HMM E-Value=1.4e-23) 28 8.6
SB_21078| Best HMM Match : P120R (HMM E-Value=0.44) 28 8.6
SB_19492| Best HMM Match : Ank (HMM E-Value=1.5e-05) 28 8.6
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_42615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_34044| Best HMM Match : PHZA_PHZB (HMM E-Value=5.4) 28 8.6
SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_28765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_15365| Best HMM Match : U79_P34 (HMM E-Value=1.8) 28 8.6
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 130 bits (315), Expect = 1e-30
Identities = 57/117 (48%), Positives = 81/117 (69%)
Frame = +3
Query: 411 LKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRS 590
LK+LGL+YLDLYLIHWP +F++GD+ FPKD + + + D DTW A+E LV++GL ++
Sbjct: 95 LKDLGLDYLDLYLIHWPLSFRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKA 154
Query: 591 IGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQEKLFEFCKSRDIAVRGLSXXGA 761
IGLSNFN +Q++ + +A+IKP Q+E HP LNQ KL + K +I S G+
Sbjct: 155 IGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQTIAYSPLGS 211
Score = 114 bits (274), Expect = 1e-25
Identities = 57/101 (56%), Positives = 67/101 (66%)
Frame = +2
Query: 134 VIFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFE 313
V NNG PV+GLGTWKSKPG+V AVK AI GYRH+DCA+ Y NEKEVGDALR +
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELL 62
Query: 314 EGTIKREDIFITSKLWCTFHRPDLVEEAIKTSXKEPGFGVL 436
++R+D+FITSKLW T H P V S K+ G L
Sbjct: 63 GSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYL 103
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 107 bits (256), Expect = 2e-23
Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +3
Query: 411 LKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYV-DTWGALEALVEKGLTR 587
LKNL L+YLDLYLIH P AFK+G L P + I + V +TW A+E LV KGL +
Sbjct: 136 LKNLQLDYLDLYLIHIPVAFKKGVRL-PHSIAEGIIGYTPEGVQNTWQAMEGLVAKGLCK 194
Query: 588 SIGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQEKLFEFCKSR 725
+IG+SNF+ +++ ++LE A I PA Q+E+HPYL QEKL EFC S+
Sbjct: 195 AIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSK 240
Score = 95.9 bits (228), Expect = 4e-20
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +2
Query: 179 TWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKREDIFITSKL 358
TW+S EV AV+ AI++GYRH+DCA IY NE E+G+AL EG +KRE++F+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 359 WCTFHRPDLVEEAIKTSXK 415
WC H PD V A + + K
Sbjct: 119 WCDSHHPDDVLPACQATLK 137
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 173 LGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 337
L TW S G+V AV+ A ++GYR +DCA I+ NE G+AL +G +KRE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 77.0 bits (181), Expect = 2e-14
Identities = 45/113 (39%), Positives = 65/113 (57%)
Frame = +3
Query: 411 LKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRS 590
L LGL Y+DLYLIH+P +PS V V +W A+ L +GL RS
Sbjct: 153 LTRLGLGYVDLYLIHFP------------------VPSGV--VGSWQAMIDLRSRGLIRS 192
Query: 591 IGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQEKLFEFCKSRDIAVRGLS 749
IG+SNFN + +E + + + PAV QIEVHP+L ++L ++CK +I ++ S
Sbjct: 193 IGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKRHNITIQAFS 245
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = +2
Query: 137 IFNNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEE 316
I N+GR P++GLG QAV A++ GYR +D A Y NE+ VG+A+R
Sbjct: 69 IMNDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRC---- 121
Query: 317 GTIKREDIFITSKLWCTFHRPDLVEEAIKTSXKEPGFG 430
I R +I++ +K++ T H +A S G G
Sbjct: 122 SNIPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLG 159
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 62.1 bits (144), Expect = 6e-10
Identities = 41/132 (31%), Positives = 66/132 (50%)
Frame = +3
Query: 348 RPSYGARSTALISWRKLSRPRLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSA 527
+PS S AL K ++ +K L + Y+DL+LIH P+ P
Sbjct: 94 KPSEEGHSNAL----KYAKESIKKLDIGYVDLFLIHTPR------------------PGN 131
Query: 528 VDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQEKLF 707
+ + + AL L E+GL RS+G+SNF +E + + PA+ QIE++P+ QE++
Sbjct: 132 I--IAAYDALLTLKEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEII 189
Query: 708 EFCKSRDIAVRG 743
++C I V G
Sbjct: 190 KYCNKHGITVEG 201
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 224 AIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKREDIFITSKL 358
A+ GYR +D A IY NEKEVG A+R + +KREDI++T+KL
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR----KSGLKREDIYVTTKL 93
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = +3
Query: 411 LKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRS 590
L+ L +Y+DL+LIH K DD +E + P + ++W A+E L +G RS
Sbjct: 417 LRALSTDYIDLFLIH----SKTCDDFLLTCAEGE--PRGT-WKESWKAMEELHRQGKIRS 469
Query: 591 IGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQEKLFEFCKSRDIAVRGLSXXG 758
+G+SNFN +++ ++ A + + +Q P+ K FC I G S G
Sbjct: 470 LGVSNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCNKHGIRYIGYSTLG 525
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +2
Query: 125 PVPVIFNNGRTCPVIGLGTWKSKPGEVT-QAVKDAIDIGYRHVDCAHIY-LNEKEVGDAL 298
P V+ +G T PV+G GT + GE T VK A++ GYR +D A Y L+E +V A+
Sbjct: 326 PADVLLASGYTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAI 383
Query: 299 RAKFEEGTIKREDIFITSKL 358
+ I R+DIFI +KL
Sbjct: 384 ----ADSGIPRKDIFIITKL 399
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 52.0 bits (119), Expect = 6e-07
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 143 NNGRTCPVIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 322
++G P GLG + QAV A++ GYR +D A Y NEK VG+ALR E
Sbjct: 4 SDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----ESA 59
Query: 323 IKREDIFITSKLWCTFH 373
+ R ++++ +K++ T H
Sbjct: 60 VPRSEVYLVTKVYHTDH 76
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 35.1 bits (77), Expect = 0.075
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -3
Query: 786 GXXXGRXGEPXXXRGPSPRCRDSCRTRTASPGSGRGALRFGGQPA*SWPLPVLSQSGAG 610
G GR P R PSPR R R+R+ SP GG+P S P+ LS S +G
Sbjct: 1367 GENSGRSPSPSRTRSPSPRRRMFGRSRSRSPEKSMDDTDAGGRP--SSPIRQLSPSRSG 1423
>SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2537
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 123 RQSPSYSTTDARVPSSD*ELGSLSRER*LKQSKTRSTSATGTWTAPTSTSMRRRWGTP 296
RQSP Y + D D +L + ER + + K G WT+ ST + G P
Sbjct: 2435 RQSPDYKSRDRTRQHLDDDLRMIELERQMLKRKEDELLQLGVWTSLVSTMLEALLGLP 2492
>SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 789
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 617 PD*ESTGSGQDQAGCPPNRSAPLPEPGEAVR---VLQESRHR 733
PD S G + GCP S P P P AV+ + Q+SR R
Sbjct: 690 PDNTSPARGPNNEGCPSTTSTPAPAPAPAVQSACLQQQSRAR 731
>SB_46930| Best HMM Match : PWWP (HMM E-Value=0.017)
Length = 237
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 462 QAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEV 641
Q ++ GD + K + KF P+ + ++T G+ E L G +++ SN ++ V
Sbjct: 82 QEWRNGDRILAKWQDCKFYPAKILKINTDGSFEVLFYDGFKKTVQRSNIKPDNSKKTFPV 141
Query: 642 AK 647
K
Sbjct: 142 DK 143
>SB_47537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 31.5 bits (68), Expect = 0.92
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 59 RRTDRIEHRAPSSKHQASSMAAPVPVIFNNGRTCPVI 169
R+TD H P KH A S+ A V F+ GR P +
Sbjct: 100 RQTDDERHLFPGLKHMAGSLTADCTVYFSPGRRRPSV 136
>SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18)
Length = 563
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +3
Query: 75 SSTEHRAASIKHQAWPRQSPSYSTTDARVPSSD*ELGSLSRER*LKQSKTRSTSATGTWT 254
+ T RA +P P Y +D +PS + + R L +++T+S S +GT
Sbjct: 353 TGTPLRADVPPFAGYPPALPQYFASDLNMPSFGPGMPGIMANRNLTRTRTKSRSNSGTSC 412
Query: 255 APTSTSMRRRW 287
A T+ W
Sbjct: 413 ANCHTTQTTLW 423
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 102 IKHQAWPRQSPSYSTTDARVPSSD*ELGSLSRER*LKQSKTR 227
+K + ++S YSTTD+ S D E SRER +K+ K +
Sbjct: 740 VKKRKETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKHKKK 781
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 336 ISS*RPSYGARSTALISWRKLSRPRLKNLGLEYLDLYLIHW 458
+S RP + ++S K L+ LG++ +DLYL+HW
Sbjct: 31 LSKVRPENASEMKMMLSCEK----SLERLGIDRIDLYLLHW 67
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 44 ELIGDRR--TDRIEHRAPSSKHQASSMAAPVPVIF 142
E++ D T+ +H PSS H A+S P+P+IF
Sbjct: 3010 EIVSDEEDVTETGQHSRPSSPHLATSTDIPLPLIF 3044
>SB_39716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 47 LIGDRR-TDRIEHRAPSSKHQASSMAAPVPVIFNNGRTCPVIGLGTWKSKPGEVTQAV 217
L+G+R + EH AP S A P NN CP G T KS+ E A+
Sbjct: 33 LLGERGISSTSEHTAPRGLVVNQSQALHFPYSANNSCDCPPAGKETEKSQVSEKPSAM 90
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 534 YVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVA-KIKPAVLQIEVHPYLNQEKLFE 710
Y+D L L +G + I L+NF+ +++ + + KI +Q + EK+ +
Sbjct: 37 YLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHGIKISSNQIQFSLIDRRANEKMVK 96
Query: 711 FCKSRDIAV 737
FC I++
Sbjct: 97 FCLDHGISL 105
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 357 YGARSTALISWRKLSRPRLKNLGLEYLDLY-LIHWPQAFKEGDDLFPKDSEDKFIPSAVD 533
+G I+ +L P+ K +G++ Y + QA D+F +++DK +PS V
Sbjct: 13 FGLVVAGYIAQSRLPPPKPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVA 72
Query: 534 YVD 542
+ D
Sbjct: 73 FTD 75
>SB_10218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F+ V YV ++L +G +RS+GL+
Sbjct: 225 LVYVRYELRPLPEQNGEPGPMFVREGGDAFVNCVVSYV-----ADSLRNRGTSRSLGLTK 279
Query: 606 FNRRQIER 629
+ +ER
Sbjct: 280 TRGKVLER 287
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 176 GTWKSKPGEVTQAVKDAIDIGYRHVDCA 259
G+W + P +VT ++ +D+G RHV CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_7073| Best HMM Match : ResIII (HMM E-Value=0.083)
Length = 1105
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F+ V YV ++L +G +RS+GL+
Sbjct: 203 LVYVRYELRPLPEQNGEPGPMFVREGGDAFVNCVVSYV-----ADSLRNRGTSRSLGLTK 257
Query: 606 FNRRQIER 629
+ +ER
Sbjct: 258 TRGKVLER 265
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F V YV + L +G TRS+GL+
Sbjct: 429 LVYVRYELRPLPEQNGEPGPMFEREGSDAFANCVVSYV-----ADFLRNRGTTRSLGLTK 483
Query: 606 FNRRQIER 629
+ +ER
Sbjct: 484 TRGKILER 491
>SB_40233| Best HMM Match : Ion_trans_2 (HMM E-Value=1.4e-23)
Length = 750
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F V YV + L +G +RS+GL+
Sbjct: 304 LVYVRYELRPLPEQNGEPGPMFEREGSDAFANCVVSYV-----ADFLRNRGTSRSLGLTK 358
Query: 606 FNRRQIERV 632
+ +ER+
Sbjct: 359 TRGKILERI 367
>SB_21078| Best HMM Match : P120R (HMM E-Value=0.44)
Length = 585
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 587 QHRTLQL--QPAPD*ESTGSGQDQAGCPPNRSAPL 685
QH +LQ QPAP+ STG G G P +S L
Sbjct: 131 QHTSLQAGAQPAPNQGSTGQGAAPQGAPLQKSTNL 165
>SB_19492| Best HMM Match : Ank (HMM E-Value=1.5e-05)
Length = 559
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 432 YLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDY 536
Y L+ +H+ F+E D+FP +D F DY
Sbjct: 30 YHKLHYLHYLDMFQESGDVFPLKKDDMFDYLLFDY 64
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 70 SHRAPSTEQQASSIKHGRASPRHIQQRTHVSRHR 171
SHR S+ Q+ +S H +AS H ++R HR
Sbjct: 1077 SHRVASSSQRVASGSHRKASGSHRERRGASGSHR 1110
>SB_42615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E LF ++ D F V YV + L +G +RS+GL+
Sbjct: 216 LVYVRYELRPLPEQNGEPGPLFEREGGDTFANCVVSYV-----ADFLRNRGTSRSLGLTK 270
Query: 606 FNRRQIER 629
R +ER
Sbjct: 271 TRGRILER 278
>SB_34044| Best HMM Match : PHZA_PHZB (HMM E-Value=5.4)
Length = 514
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F V YV + L +G +RS+GL+
Sbjct: 203 LVYVRYELRPLPEQNGEPGPMFKREGSDAFANCVVSYV-----ADFLRNRGTSRSLGLTK 257
Query: 606 FNRRQIER 629
R +ER
Sbjct: 258 TRGRILER 265
>SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2047
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 432 YLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDY 536
Y L+ +H+ F+E D+FP +D F DY
Sbjct: 1478 YHKLHYLHYLDMFQESGDVFPLKKDDMFDYLLFDY 1512
>SB_28765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E LF ++ D F V YV + L +G +RS+GL+
Sbjct: 187 LVYVRYELRPLPEQNGEPGPLFEREGGDTFANCVVSYV-----ADFLRNRGTSRSLGLTK 241
Query: 606 FNRRQIER 629
R +ER
Sbjct: 242 TRGRILER 249
>SB_15365| Best HMM Match : U79_P34 (HMM E-Value=1.8)
Length = 992
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 426 LEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSN 605
L Y+ L P+ E +F ++ D F V YV E L +G +RS+GL+
Sbjct: 225 LVYVRYELRPLPKQSGEPGPMFEREGSDAFANCVVSYV-----AEFLRNRGTSRSLGLTK 279
Query: 606 FNRRQIER 629
+ +ER
Sbjct: 280 TRGKILER 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,514,654
Number of Sequences: 59808
Number of extensions: 446933
Number of successful extensions: 1623
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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