Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A17
         (947 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1042 + 8187536-8187616,8187713-8188315                           32   0.58 
02_03_0099 + 15206282-15206917                                         32   0.58 
01_01_1008 - 7987936-7988628,7988923-7989102                           32   0.77 
07_01_1201 - 11419851-11419913,11420090-11420311                       28   9.4  

>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 372 RTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHRGSXPGGNAWY 232
           RTE   A  +  R A   E+G +  G R+ R RR  RGS   G +W+
Sbjct: 63  RTERERA-PLAARPAGEEEEGRRAGGWRRRRRRRQRRGSRSLGGSWW 108


>02_03_0099 + 15206282-15206917
          Length = 211

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 137 LLHFSIGSAPLXEHHKNRRSSQRW 208
           +LH  +G  P  ++H++RRS+ RW
Sbjct: 171 VLHVGVGKGPSLQNHRDRRSTSRW 194


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 342 RKRHASRREKGGQVSGKRQGRNRRAHRGSXPG 247
           R R   RR  GG+V+G+   R+RR  RG+  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEG 270


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 200 QRWRN--PTGL*RYQAFPPGKLPRCALLFRPC--RLPDTCPPFSLREAWRFLIAHAVGIS 367
           Q+WR+  PTG   + +FP G LP  A   +P   R P T P F  R A      + + + 
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSRVAEGLFGLNGIEVG 85

Query: 368 VRCRSFAP 391
           +   +F P
Sbjct: 86  IEGDNFTP 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,966,073
Number of Sequences: 37544
Number of extensions: 452609
Number of successful extensions: 1123
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)