Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A16
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1425 + 33463039-33463330,33464370-33464460,33465299-334656...    30   3.1  
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004           29   7.1  
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144...    29   7.1  
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862...    28   9.3  

>04_04_1425 +
           33463039-33463330,33464370-33464460,33465299-33465656,
           33465771-33465944,33466403-33466607,33466717-33466784,
           33467279-33467360,33467513-33467549,33467822-33467913,
           33469219-33469294,33469402-33469585,33469859-33469867
          Length = 555

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 676 LSELIPARRSRTTERQGVSERGSGRAXQYANRLSPRVGRFINAEKTS 536
           ++ L  ARR R+ E  G  E GS        RLSP  G    AE ++
Sbjct: 1   MASLFRARRRRSPEDDGEGEDGSASGRVTRRRLSPEEGALSLAEASA 47


>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
          Length = 681

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -2

Query: 179 YQLTFWFFSSSRSFLQK-------PRPPKKP 108
           +QLT W+F SS SF QK       P PP  P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283


>08_01_0170 -
           1440908-1441072,1441539-1441581,1442155-1442619,
           1442714-1444149
          Length = 702

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -2

Query: 179 YQLTFWFFSSSRSFLQK-------PRPPKKP 108
           +QLT W+F SS SF QK       P PP  P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286


>10_08_0608 +
           19184722-19185224,19185331-19185410,19186048-19186235,
           19187021-19187927,19188015-19188142,19189270-19189356,
           19189422-19189472,19189582-19189668,19189746-19189873,
           19190469-19190608,19190721-19190882,19190964-19192733,
           19192807-19192922,19193077-19193227,19193243-19193371,
           19193598-19194139
          Length = 1722

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 200 YFRSRIRWWCKSKNCSSVDVAFTSRPVRKCYFCSKSCSRG 319
           +FRSR +W C    CS+ + A        CY C+ S  +G
Sbjct: 185 FFRSRAKWTCGWHLCSTCEKAVQ----YMCYTCTYSLCKG 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,866,850
Number of Sequences: 37544
Number of extensions: 429258
Number of successful extensions: 1101
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)