Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A15
(1082 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 39 0.006
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.057
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.30
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 32 0.92
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 32 0.92
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.92
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 31 1.6
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 2.1
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 2.6
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 25 2.6
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 25 2.8
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.8
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 3.7
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 6.5
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 8.6
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP PPPPP PPPPP G
Sbjct: 678 PPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCA 737
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 738 GLPPPPPPPPP 748
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/80 (25%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP PPPPP PPPPP G
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLP 754
Query: 496 XFXPPXGXP-PPXFXXKXRV 440
PP P P F + ++
Sbjct: 755 PPPPPIDVPMKPLFWKRIQL 774
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 790 PPPXPPPP 813
PPP PPPP
Sbjct: 694 PPPPPPPP 701
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 790 PPPXPPPP 813
PPP PPPP
Sbjct: 695 PPPPPPPP 702
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 793 PPXPPPPXXGGGG 831
PP PPPP G G
Sbjct: 712 PPPPPPPPPGCAG 724
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 793 PPXPPPPXXGGGG 831
PP PPPP G G
Sbjct: 740 PPPPPPPPPGCAG 752
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.9 bits (79), Expect = 0.057
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXXGG 498
PPPP G PPPPPP GGG PPPP GG
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPL--------PPPP-----GG 979
Query: 497 XFXPPXXGTPP 465
PP PP
Sbjct: 980 SAPPPPPPPPP 990
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 475 PXXGGXNXPPXXXXXGGGGXXXXKKKKKXXXPPPPPXXXXXGGGGGGPPXXP 630
P GG P G PPPPP GGG PP P
Sbjct: 924 PPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP 975
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 475 PXXGGXNXPPXXXXXGGGGXXXXKKKKKXXXPPPPPXXXXXGGGGGGPPXXP 630
P G N P GG PPPPP GGG P P
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLP 974
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/71 (23%), Positives = 18/71 (25%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP + PPPP PP PP
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAP 982
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 983 PPPPPPPPPPP 993
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 619 GAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
GAP PPP PPPPP G G PP PPP
Sbjct: 288 GAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPP--PPPP 337
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 484 GGXNXPPXXXXXGGGGXXXXKKKKKXXXPPPPPXXXXXGGGGGGPPXXP 630
GG PP G PPPPP G GG PP P
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGGGG 567
PPPP G PPPPPP G GG
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG 329
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXP 630
PPPPP G GG PP P
Sbjct: 316 PPPPPPPPPPGDGGAPPPPPP 336
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 790 PPPXPPPPXXGGGG 831
PPP PPPP G GG
Sbjct: 316 PPPPPPPPPPGDGG 329
Score = 27.5 bits (58), Expect(2) = 0.56
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 789 PPPXPPPPXXGG 824
PPP PPPP GG
Sbjct: 318 PPPPPPPPGDGG 329
Score = 23.8 bits (49), Expect(2) = 0.56
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 313 APPPPPPPP 321
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.9 bits (69), Expect = 0.92
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 4/74 (5%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXX----PPPPPXKX 509
PPPP APPPPP PPPPP +
Sbjct: 320 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRR 379
Query: 508 XGGGXFXPPXGXPP 467
G PP PP
Sbjct: 380 PPSGKINPPPPPPP 393
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPP 598
PPPP GPPPPPP
Sbjct: 195 PPPPHSRHGSAPPPPERSSGPPPPPP 220
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPP 517
PPPP KK + PPPPP G PPPPP
Sbjct: 147 PPPPDRGGQLAKKPSQGSF-PPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPP 198
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -2
Query: 610 PPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXG--GGXFXPPXGXPPP 464
PPPP PPPPP + GG PP G PP
Sbjct: 331 PPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPP 381
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.9 bits (69), Expect = 0.92
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 4/74 (5%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXX----PPPPPXKX 509
PPPP APPPPP PPPPP +
Sbjct: 232 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRR 291
Query: 508 XGGGXFXPPXGXPP 467
G PP PP
Sbjct: 292 PPSGKINPPPPPPP 305
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPP 598
PPPP GPPPPPP
Sbjct: 107 PPPPHSRHGSAPPPPERSSGPPPPPP 132
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPP 517
PPPP KK + PPPPP G PPPPP
Sbjct: 59 PPPPDRGGQLAKKPSQGSF-PPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPP 110
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -2
Query: 610 PPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXG--GGXFXPPXGXPPP 464
PPPP PPPPP + GG PP G PP
Sbjct: 243 PPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPP 293
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.92
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXX--GGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXX 504
PPPP + G GGPP PP GG PPP
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGGPPQLPPNLPPPPGG---------MRGMPPPPMGMYPP 478
Query: 503 GGXFXPPXXGTPPXF 459
F PP G PP F
Sbjct: 479 PRGFPPPPFGPPPPF 493
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -2
Query: 529 PPPPXKXXGGGXFXPPXGXPPPXFXXKXRVFXXKKXGGGGVPXXKKKXP 383
PPPP G + PP G PPP F + G P +++ P
Sbjct: 469 PPPPM-----GMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPPPPRQRMP 512
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP PPPP PPPPP G
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Query: 496 XFXPPXGXPP 467
PP PP
Sbjct: 406 PPPPPTNGPP 415
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 616 APPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
+PPPP PPPPP G PP PPP
Sbjct: 356 SPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPP 406
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPP PPPPP G PP PPP
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXPXXFFXXXXXXXXGG 672
PPPPP G GG PP P F GG
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPPPPFGAPPPPALNGG 229
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 619 GAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXG 476
G PPPPP PPPP GG PP G
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPG 706
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXP 630
PPPPP G GG PP P
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPP 680
Score = 25.0 bits (52), Expect(2) = 9.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 660 PPPPPPPPPGG 670
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 795 PXPPPPXXGG 824
P PPPP GG
Sbjct: 689 PPPPPPIGGG 698
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 25.0 bits (52), Expect(2) = 2.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 381 PPPPPPPPAPG 391
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 377 APPPPPPPP 385
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 25.0 bits (52), Expect(2) = 2.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 285 PPPPPPPPPPG 295
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 279 APPPPPPPP 287
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 25.0 bits (52), Expect(2) = 2.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 84 PPPPPPPPPPG 94
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 78 APPPPPPPP 86
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP PP PPP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP PP PPP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP PP PPP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP PP PPP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPP 597
PPPP + G PPPPP
Sbjct: 281 PPPPPLTGGMLPPPFGGHPAAAPPPPP 307
Score = 21.4 bits (43), Expect(2) = 3.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 614 PPPPPPXXXXXG 579
PPPPPP G
Sbjct: 315 PPPPPPPPMLGG 326
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 532 PPPPPXKXXGGGXFXPPXGXPP 467
PPPPP GGG F PP PP
Sbjct: 653 PPPPP----GGGMFPPPPPPPP 670
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.9 bits (64), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 789 PPPXPPPPXXGGG 827
PPP PPPP GGG
Sbjct: 685 PPPAPPPPPIGGG 697
Score = 29.9 bits (64), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 790 PPPXPPPPXXGGG 828
PPP PPPP GGG
Sbjct: 685 PPPAPPPPPIGGG 697
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = -2
Query: 616 APPPPPXXXXXXXXXXXXXXXXXFXXXX---PPPPPXKXXGGGXFXPPXGXPPP 464
APPPPP PPPPP G PP PPP
Sbjct: 724 APPPPPLGRDSAAVFMLTWTPLTNTSSAANVPPPPPPPAVPGEGARPPPPPPPP 777
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 6.5
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP GAPPPPP PPPPP
Sbjct: 288 PPPPSRGAAPPPPSR----GAPPPPPSRGSAPPPPPARMGTA------PPPPPPSRSSQR 337
Query: 496 XFXPPXGXPPP 464
P G PPP
Sbjct: 338 PPPPSRGAPPP 348
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = -2
Query: 673 PPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGX 494
PPP ++ GAPPPP PPPP G
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEG-- 383
Query: 493 FXPP--XGXPPP 464
PP G PPP
Sbjct: 384 -RPPSSLGNPPP 394
Score = 28.7 bits (61), Expect = 8.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPP 598
PPPP R PPPPPP
Sbjct: 306 PPPPSRGSAPPPPPARMGTAPPPPPP 331
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Frame = +1
Query: 457 KKXGGVPXXG-GXNXPPXXXXXGGGGXXXXKKKKKXXXPPPPPXXXXXG------GGGGG 615
K+ G VP G G PP GGG + PPPP G G GGG
Sbjct: 478 KQMGKVPGGGQGWGQPPPGAGQGGG--PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGG 535
Query: 616 PP 621
PP
Sbjct: 536 PP 537
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 620 GGPPPPPPXXXXXGG 576
GGPPPPPP GG
Sbjct: 149 GGPPPPPPIAPATGG 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,031,041
Number of Sequences: 59808
Number of extensions: 407253
Number of successful extensions: 4061
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2717
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3284497861
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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