Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A15
         (1082 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.55 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect(2) = 0.55
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 786 SPPPXPPPP 812
           SPPP PPPP
Sbjct: 782 SPPPPPPPP 790



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 629 GXXGGPPPPPPXXXXXGGGG 570
           G    PPPPPP       GG
Sbjct: 779 GIGSPPPPPPPPPSSLSPGG 798



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 620 GGPPPPPPXXXXXGGGGG 567
           G PPPPPP        GG
Sbjct: 781 GSPPPPPPPPPSSLSPGG 798



 Score = 21.0 bits (42), Expect(2) = 0.55
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 789 PPPXPPPPXXGGG 827
           PPP PPP     G
Sbjct: 785 PPPPPPPSSLSPG 797


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 529 PPPPXKXXGGGXFXPPXGXPPP 464
           PPPP    G     PP   PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 24.2 bits (50), Expect = 6.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 629 GXXGGPPPPPP 597
           G  G PPPPPP
Sbjct: 526 GPLGPPPPPPP 536



 Score = 24.2 bits (50), Expect = 6.8
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
 Frame = -2

Query: 532 PPP--PPXKXXGGGXFXPPXGXPPP 464
           PPP  PP     GG    P G  PP
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -3

Query: 669 PPXXXXXXXKKXXRXXXGPPPPPP 598
           PP       +       GPPPPPP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPP 535



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 789 PPPXPPPPXXGG 824
           PPP PPPP   G
Sbjct: 581 PPPAPPPPPPMG 592



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 790 PPPXPPPPXXGG 825
           PPP PPPP   G
Sbjct: 581 PPPAPPPPPPMG 592


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 15/49 (30%), Positives = 15/49 (30%)
 Frame = +3

Query: 465 GGGXPXGGXKXPPPXXLXGGGGGXXXXXXXXXXXXXXXXXXXXXXGGGG 611
           GGG P GG          GGGGG                      GGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 532 PPPPPXKXXGGGXFXPPXGXPP 467
           PP PP    GG    PP G  P
Sbjct: 297 PPRPPMPMQGGAPGGPPQGMRP 318



 Score = 24.2 bits (50), Expect = 6.8
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 571 PPPPXXXXXGGGGGGPP 621
           PP P     GG  GGPP
Sbjct: 297 PPRPPMPMQGGAPGGPP 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,118
Number of Sequences: 2352
Number of extensions: 14497
Number of successful extensions: 261
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 121274205
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)