Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A15
(1082 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 37 0.020
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 35 0.11
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 32 0.57
At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30... 32 0.76
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 31 1.0
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 31 1.0
At1g61080.1 68414.m06877 proline-rich family protein 31 1.0
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 31 1.3
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 31 1.7
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 31 1.7
At3g50180.1 68416.m05486 hypothetical protein 29 2.1
At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family... 30 3.1
At4g23890.1 68417.m03436 expressed protein hypothetical protein,... 24 3.9
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 29 4.0
At5g66815.1 68418.m08424 expressed protein 29 5.3
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 5.3
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 29 5.3
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 24 6.8
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 7.1
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 7.1
At1g67770.1 68414.m07733 RNA-binding protein, putative similar t... 28 9.3
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 28 9.3
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 37.1 bits (82), Expect = 0.020
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP PPPPP PPPPP
Sbjct: 526 PPPPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSR 585
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 586 SIPPPLAQPPP 596
Score = 35.1 bits (77), Expect = 0.081
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP K++ PPPPP PPPPP G
Sbjct: 623 PPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPPP----------PPPPPTSHSGSI 672
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 673 RVGPPSTPPPP 683
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
P PP + APPPPP PPPPP +
Sbjct: 597 PRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPP-PPPPPTRIPAAK 655
Query: 496 XFXPPXGXPPPXFXXKXRV 440
PP PP RV
Sbjct: 656 CAPPPPPPPPTSHSGSIRV 674
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXXGG 498
PPPP L PPPPPP PPPP
Sbjct: 525 PPPPPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPS 584
Query: 497 XFXPPXXGTPP 465
PP PP
Sbjct: 585 RSIPPPLAQPP 595
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPP 598
PPPP K+ + PPPPPP
Sbjct: 623 PPPPSFGSTGNKRQAQPPPPPPPPPP 648
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 675 PPPPXXXXXXXKKXXRXXXGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPP 517
PPPP + PPPPPP G PPPPP
Sbjct: 599 PPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQA-----QPPPPPPPP 646
Score = 25.4 bits (53), Expect(2) = 0.92
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 723 PPXPXXFXXFXFXXXXXXXXXSPPPXPPPP 812
PP P F PPP PPPP
Sbjct: 619 PPPPPPPPSFGSTGNKRQAQPPPPPPPPPP 648
Score = 25.0 bits (52), Expect(2) = 1.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 619 PPPPPPPPSFG 629
Score = 24.6 bits (51), Expect(2) = 0.92
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 786 SPPPXPPPPXXGGG 827
+PPP PPPP G
Sbjct: 657 APPPPPPPPTSHSG 670
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +3
Query: 723 PPXPXXFXXFXFXXXXXXXXXSPPPXPPPP 812
PP P +PPP PPPP
Sbjct: 550 PPLPSFSNRDPLTTLHQPINKTPPPPPPPP 579
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
P PPP PPPPP GGG PP G PPP
Sbjct: 652 PRPPPRSAGGGKSTNLPSARPPLPGGGPPPPPP-PPGGGPPPPPGGGPPP 700
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGGGG 567
PPPP G PPPPPP G GGG
Sbjct: 679 PPPPPPPPGGGPPPPPGGGPPPPPPPPGALGRGAGGG 715
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXP 630
PPPPP GGGPP P
Sbjct: 682 PPPPPGGGPPPPPGGGPPPPP 702
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.3 bits (70), Expect = 0.57
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP + PP PPP
Sbjct: 440 PPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPP 489
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP PP PPP
Sbjct: 441 PPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPP 490
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPP + PP PPP
Sbjct: 455 PPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPP 504
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/73 (23%), Positives = 18/73 (24%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
P PP P PPP PPPPP
Sbjct: 408 PSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467
Query: 496 XFXPPXGXPPPXF 458
PP PPP +
Sbjct: 468 PPPPPPPPPPPVY 480
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/73 (24%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXP--PPPPXKXXG 503
PPPP +PPPPP P PPP +
Sbjct: 500 PPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYY 559
Query: 502 GGXFXPPXGXPPP 464
PP PPP
Sbjct: 560 YSSPPPPHSSPPP 572
>At3g55460.1 68416.m06159 SC35-like splicing factor, 30 kD (SCL30)
nearly identical to SC35-like splicing factor SCL30, 30
kD [Arabidopsis thaliana] GI:9843657;
Serine/arginine-rich protein/putative splicing factor,
Arabidopdis thaliana, EMBL:AF099940; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 262
Score = 31.9 bits (69), Expect = 0.76
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 641 KKXXGXXGGPPPPPPXXXXXGGGGG 567
++ G G PPPPP GGGGG
Sbjct: 13 RRGYGGRGRSPPPPPPRRGYGGGGG 37
Score = 31.9 bits (69), Expect = 0.76
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 629 GXXGGPPPPPPXXXXXGGGGG 567
G PPPPPP GGGGG
Sbjct: 18 GRGRSPPPPPPRRGYGGGGGG 38
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGG 615
PPPPP GGGGGG
Sbjct: 23 PPPPPPRRGYGGGGGG 38
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGG 615
PPPPP GGGGGG
Sbjct: 24 PPPPPRRGYGGGGGGG 39
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +1
Query: 457 KKXGGVPXXGGXNXPPXXXXXGGGGXXXXKKKKKXXXPPPPPXXXXXGGGGGGP 618
K GGV GG N GGGG PP GGGGGGP
Sbjct: 369 KGGGGVQMNGGPNGGKKGGGGGGGGGGG---PMSGGLPPGFRPMGGGGGGGGGP 419
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPP 597
PPPP + G GPPPPPP
Sbjct: 115 PPPPKGLGNINDSDDEGDMIGPPPPPP 141
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP K PPPPP PPPPP G
Sbjct: 492 PPPPTPPAF----KPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPP--GT 545
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 546 AAAPPPPPPPP 556
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
PPPPP PPPPP G PP PPP
Sbjct: 564 PPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPP--PPPP 611
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 616 APPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXGXPPP 464
APPPPP PPPPP G PP PPP
Sbjct: 522 APPPPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPP---GTQAAPPPPPPPP 569
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 620 GGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXXGGXFXPP 483
GGPPPPPP G PPPP G PP
Sbjct: 588 GGPPPPPPPMPLANGA-----------TPPPPPPPMAMANGAAGPP 622
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXP 630
PPPPP G GPP P
Sbjct: 605 PPPPPPPMAMANGAAGPPPPP 625
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 568 PPPPPXXXXXGGGGGGPPXXP 630
PPPPP G GPP P
Sbjct: 621 PPPPPPRMGMANGAAGPPPPP 641
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/71 (25%), Positives = 18/71 (25%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP PPPPP PP PP
Sbjct: 709 PPPPAPPAPPTPIVHTSSPPPPPPPPPPPAPPTPQSNGISAMKSSPPAPPAPPRLPTHSA 768
Query: 496 XFXPPXGXPPP 464
PP PPP
Sbjct: 769 SPPPPTAPPPP 779
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 569 PPPPPXXXXXGGGGGG 616
PPPPP GGGGGG
Sbjct: 33 PPPPPGNSSTGGGGGG 48
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 612 PPPPPXXXXXGGGGG 568
PPPPP GGGGG
Sbjct: 33 PPPPPGNSSTGGGGG 47
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 611 PPPPPXXXXXGGGGG 567
PPPPP GGGGG
Sbjct: 33 PPPPPGNSSTGGGGG 47
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Frame = -1
Query: 620 GGPPPPP------PXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXXGGXFXPPXXGTPP 465
GGPPPPP P GG PPPP GG PP G PP
Sbjct: 249 GGPPPPPHIGGSAPPPPHMGGSAPPPPHMG--QNYGPPPPNNM--GGPRHPPPYGAPP 302
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPP 597
PPPP L ++ PPPPPP
Sbjct: 8 PPPPPLPPRLELRRQRAPPPQPPPPPP 34
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 789 PPPXPPPPXXG 821
PPP PPPP G
Sbjct: 35 PPPPPPPPRLG 45
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 24 APPPQPPPP 32
>At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 147
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Frame = -1
Query: 614 PPPPPPXXXXXGGGGGXXXFF-----FFFXXXXPPPPXQXXXGGXFXPP---XXGTPP 465
PPPPPP GGGG + PPP GG + PP GTPP
Sbjct: 51 PPPPPPSS---SGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPP 105
>At4g23890.1 68417.m03436 expressed protein hypothetical protein,
Synechocystis sp., PIR:S76577
Length = 250
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 789 PPPXPPPPXXGG 824
PPP PPPP G
Sbjct: 138 PPPPPPPPAKQG 149
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 786 SPPPXPPPP 812
+PPP PPPP
Sbjct: 136 NPPPPPPPP 144
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 677 PPPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGG 573
PPPP G PPPPPP G G
Sbjct: 27 PPPPMRRSAPSPPPMSGRVPPPPPPPPMFDPKGAG 61
>At5g66815.1 68418.m08424 expressed protein
Length = 105
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 786 SPPPXPPPPXXGGG 827
SPPP PPPP GG
Sbjct: 68 SPPPPPPPPSQSGG 81
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = -2
Query: 676 PPPPXXXXXXXKKKXXXXXGAPPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGG 497
PPPP G PPPPP PPP P +
Sbjct: 54 PPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPPRSQPPPKPPQKNLPR 113
Query: 496 XFXPPXGXP 470
PP P
Sbjct: 114 RHPPPPRSP 122
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = -2
Query: 613 PPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGG-GXFXPPXGXPPP 464
PPPPP PPPPP G G PP PPP
Sbjct: 233 PPPPPLPMAVRKGVAAPPLPPPGTAALPPPPPLPMAAGKGVAAPP--PPPP 281
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 792 PPXPPPPXXGGG 827
PP P PP GGG
Sbjct: 66 PPPPSPPSSGGG 77
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 789 PPPXPPPP 812
PPP PPPP
Sbjct: 51 PPPSPPPP 58
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = -2
Query: 616 APPPPPXXXXXXXXXXXXXXXXXFXXXXPPPPPXKXXGGGXFXPPXG--XPPP 464
+PPPPP PPPPP F PP PPP
Sbjct: 532 SPPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPP 584
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 674 PPPXXXXXLXXKKXXGXXGGPPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPP 519
PPP L KK PPPPPP G PPPP
Sbjct: 623 PPP-----LPPKKLLATTNPPPPPPPPLHSNSRMGAPTSSLVLKSPPVPPPP 669
>At1g67770.1 68414.m07733 RNA-binding protein, putative similar to
terminal ear1 gb|AAC39463.1
Length = 527
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 615 PPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPP 517
PPPPPP +F +F PPPPP
Sbjct: 44 PPPPPPPPPPP-------LYFSYFSLPPPPPPP 69
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 614 PPPPPPXXXXXGGGGGXXXFFFFFXXXXPPPPXQXXXGGXFXPPXXG 474
P PP P GGGGG PPP GG PP G
Sbjct: 33 PHPPVPKPPQHGGGGG---------GGSKPPPHHGGKGGGKPPPHGG 70
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,054,158
Number of Sequences: 28952
Number of extensions: 452393
Number of successful extensions: 6295
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4018
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2695625888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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