Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A13
(972 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 127 4e-28
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 8e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 3e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.006
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.018
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.096
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 37 0.68
UniRef50_Q9HUP6 Cluster: Putative uncharacterized protein; n=6; ... 34 6.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.3
UniRef50_P09785 Cluster: Anthranilate synthase component 1; n=8;... 33 8.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 127 bits (307), Expect = 4e-28
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +3
Query: 561 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRF 728
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRF
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRF 79
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 561 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 674
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +3
Query: 561 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 686
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/84 (48%), Positives = 46/84 (54%)
Frame = +2
Query: 326 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 505
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 506 GTVKRPRCWRFSIGSAPLNEHHKN 577
RPR RFSIGSAPL K+
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKS 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 502 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 389
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/56 (58%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -3
Query: 751 DTYSVSYEKR-HASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 587
DT SVSYEK + +K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 44 DTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 469
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 653 VRSPVPTLPLTGYLSAFLPSGSVAL 727
+RSPVPTLPLTGYLSAFLPSGSVAL
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVAL 25
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 421 HSKAVIRLSTESGDNAGKNM 480
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.006
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 228 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 350
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.018
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 525 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 674
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.096
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 372 ERGSGRAPNTQTASPRALADSLMQ 301
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 37.1 bits (82), Expect = 0.68
Identities = 23/42 (54%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 616 IKIPGVSPWKLPRALSCSDPAAYRIPV-RLSPFGKRGASHSS 738
+KI VS LP ALSCS+PA RIPV S G SHSS
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
>UniRef50_Q9HUP6 Cluster: Putative uncharacterized protein; n=6;
Pseudomonas aeruginosa|Rep: Putative uncharacterized
protein - Pseudomonas aeruginosa
Length = 200
Score = 33.9 bits (74), Expect = 6.3
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 652 RALSCSDPAAYRIPVRLSPFGKRGASHSSRCRYLSRVXRR 771
RAL C++ A +P FGKR RCR+L+R+ RR
Sbjct: 46 RALLCAERVAL-VPSHRHAFGKRMGDFELRCRWLARLARR 84
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 511 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 389
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_P09785 Cluster: Anthranilate synthase component 1; n=8;
Pseudomonas aeruginosa|Rep: Anthranilate synthase
component 1 - Pseudomonas aeruginosa
Length = 530
Score = 33.5 bits (73), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 604 PDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGASHSSRCRY 750
P R+ +P PW+ R L +P+ YR + F GAS S +Y
Sbjct: 269 PSRSFSMPCADPWRAYRQLCLRNPSPYRFFLDAGDFCLFGASPESALKY 317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,920,377
Number of Sequences: 1657284
Number of extensions: 14731120
Number of successful extensions: 42719
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 40497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42691
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 90631794594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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