Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A10
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.046
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect(2) = 0.046
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
 Frame = +3

Query: 549 PPPPGXGGXXFXXPPP--PPPKN 611
           PPPP  GG     PP   PPP N
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLN 553



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 22/68 (32%), Positives = 22/68 (32%)
 Frame = +2

Query: 548 PPPPXGXXXXFXXPPPPPPKKXXXXGGXRGXGVPPPXXGGXWXPPPXGGAPXKKXLXXGP 727
           PPPP G        PPP P      GG  G   P P   G       G AP    L   P
Sbjct: 587 PPPPMG--------PPPSPLAGGPLGGPAGSRPPLPNLLGF-----GGAAPPVTILVPYP 633

Query: 728 XXXXAPXP 751
                P P
Sbjct: 634 IIIPLPLP 641



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 525 PPPPPPXXXKKKXXGGAPXXFXGXXGGAXXPXP 427
           PPPPPP         G P    G   G+  P P
Sbjct: 585 PPPPPPMGPPPSPLAGGP---LGGPAGSRPPLP 614



 Score = 22.2 bits (45), Expect(2) = 0.046
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 588 PPPPPPKNXXXXGXXGG 638
           PPPPPP         GG
Sbjct: 585 PPPPPPMGPPPSPLAGG 601


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 525 PPPPPPXXXKKKXXGGAP 472
           PPPPPP        GG P
Sbjct: 783 PPPPPPPPPSSLSPGGVP 800



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 587 PPPPPPKKXXXXGG 628
           PPPPPP      GG
Sbjct: 785 PPPPPPPSSLSPGG 798


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
 Frame = -1

Query: 604 GGG--GGGXXKXXPPXPGGGG 548
           GGG  GGG      P PGGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 699 GAPPXGGGXQXPPXXGGG 646
           GAP  GGG    P  GGG
Sbjct: 210 GAPGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 604 GGGGGGXXKXXPPXPGGGG 548
           GGGGG      P   GGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGG 231


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 15/59 (25%), Positives = 18/59 (30%)
 Frame = +2

Query: 278 PXXXXXXPXXXPPPXGGGXXPPXKKKXXXGGGPPPXKXXKKKPXFXXXGGGXGXXAPPK 454
           P      P   P P GG       +     GG P       +P     GG  G   PP+
Sbjct: 258 PMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPG--GPPQ 314



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
 Frame = +2

Query: 587 PPPPPPKKXXXXGGXRGXGVP----PPXXGGXWXPPPXGGAPXKKXLXXGPXXXXAP 745
           PP P   +     G    G P    PP  GG +  PP    P +  +  G      P
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP 242


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = -2

Query: 681 GGXQXPPXXGGGTPXPRXPPXXXXFLGGGGGGXXKXXXXPXGGG 550
           GG       GGG      P       GGG GG  +      GGG
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGG 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,277
Number of Sequences: 2352
Number of extensions: 15643
Number of successful extensions: 61
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)