Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A09
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   4.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 669 FQSKSWNSSCIQP---QRSSSKSQLY 601
           F +K W++ C++P   Q   +K +LY
Sbjct: 316 FNAKPWSNYCVEPPCGQLDPTKEKLY 341


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -1

Query: 669 FQSKSWNSSCIQPQRSSSKSQLYLIVVTLLFISTHLGAVLFHLY 538
           FQS+ +      P RS  +       + +L I T++  +L+ +Y
Sbjct: 20  FQSRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVY 63


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 600 LIVVTLLFISTHLGAVLFHLYPLQYKTSEPSNL 502
           +I++ +LF+ T +G   F     Q +  EP  L
Sbjct: 86  IILMAVLFLGTFIGRAKFLAILKQMRNLEPEFL 118


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 733 VRVIKPRSGKRKGARSFRIQSLPI-EIVEL 647
           +R I    G+R+  R  R +SLP+ +++EL
Sbjct: 578 MRSITESGGRRRQTREKRKKSLPVRKLLEL 607


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,632
Number of Sequences: 336
Number of extensions: 4636
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)