Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A09
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 49 5e-06
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 32 0.63
AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical ... 31 1.5
Z82058-5|CAI46585.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical ... 29 4.4
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 29 4.4
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 29 4.4
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2
Query: 308 IVKFVCNPRYKLVGNKYSICRM-GRWEEQLPVCVKSGCPKLPPITNG-IQMTHH--DGAW 475
+ +F C+ Y+ G + S+C+ G W + P C K C LP + N I++ G
Sbjct: 370 VFRFDCHSGYRREGVESSLCKSDGTWSSKQPNCTKVACTHLPEVANAKIEVPDRFLFGDV 429
Query: 476 LMTFCLPNYRLEGSEVLYCNGYRWNSTAPKCVEMN 580
C + ++G E + C + S+ PKC++++
Sbjct: 430 ARVVCNSGFTIDGPEEIRCLANQTVSSTPKCIDID 464
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Frame = +2
Query: 308 IVKFVCNPRYKLVGNKYSICR-MGRWEEQLPVCVKSGCPKLPPITNG-----IQMTHHDG 469
+ F C+ + L+G + C G W P C CP L P NG + + G
Sbjct: 543 VAHFKCHKGFTLIGEQNLHCTTQGTWSHDFPYCNVVHCPPLLPPANGHFIGEPKEINTKG 602
Query: 470 AWLMTFCLPNYRLEGSEVLYCNG-YRWNSTAPKC 568
++ CLPNY L G + C W+ KC
Sbjct: 603 DIVLLGCLPNYMLTGGDFSVCQADGEWSEIKTKC 636
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +2
Query: 290 LRTKSRIVKFVCNPRYKLVGNKYSICRM-GRWEEQLP----VCVKSGCPKLPPITNGIQM 454
+ TK IV C P Y L G +S+C+ G W E C G P T +
Sbjct: 598 INTKGDIVLLGCLPNYMLTGGDFSVCQADGEWSEIKTKCDGYCRHPGQPDHGATTTIAKD 657
Query: 455 THHDGAWLMTFC-LPNYRLEGSEVLYC-NGYRWNSTAPKCVEMNN 583
+ G ++ +C NY+L VL C + +W+ P C+ N+
Sbjct: 658 YYSIGEKIVFYCPSQNYKLSSDNVLVCISPGQWSRRLPLCLPSNS 702
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Frame = +2
Query: 329 PRYKLVGNKYSIC-RMGRWEEQLPVCVKSGCPKLPPITNGIQMT-----HHDGAWLMTFC 490
P + + G+ S C W P CV + CP + NG +MT + G C
Sbjct: 491 PGFSVEGSAVSTCLEDATWSHSAPRCVAAHCPAV--FVNGTRMTVTVTSYRTGGVAHFKC 548
Query: 491 LPNYRLEGSEVLYCNGY-RWNSTAPKC 568
+ L G + L+C W+ P C
Sbjct: 549 HKGFTLIGEQNLHCTTQGTWSHDFPYC 575
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Frame = +2
Query: 275 HGKA--RLRTKSRIVKFVCNPRYKLVGNKYSIC-RMGRWEEQLPVCVKSGCPKLPPITNG 445
HGK T +V + C+ Y+LVG IC G W P C + C LP + NG
Sbjct: 212 HGKVVGSSLTYQSVVTYSCDHGYRLVGQVQRICLAEGIWGGNEPRCEEIRCSVLPTLPNG 271
Query: 446 -IQMTHHD-GAWLMTFCLPNYRLEGSEVLYC-NGYRWNSTAPKCV 571
I+ + GA + CL EG+ C +W++ P+C+
Sbjct: 272 YIEGSETSFGAVAVFRCLETMTHEGASKAKCMEDGQWSAPIPRCL 316
Score = 35.9 bits (79), Expect = 0.039
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 311 VKFVCNPRYKLVGNKYSICRM-GRWEEQLPVCVKSGCPK-LPPITNGIQMTHHDGAWLMT 484
VK+ CNP + LVG+ C G W + C + C + P+ + + ++T
Sbjct: 168 VKYSCNPGFLLVGSTSRQCSSNGEWTNEPANCKATECSRPSSPLHGKVVGSSLTYQSVVT 227
Query: 485 F-CLPNYRLEGSEVLYCNGYR-WNSTAPKCVEMNNNV 589
+ C YRL G C W P+C E+ +V
Sbjct: 228 YSCDHGYRLVGQVQRICLAEGIWGGNEPRCEEIRCSV 264
>Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical
protein F36H2.5 protein.
Length = 392
Score = 36.3 bits (80), Expect = 0.029
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Frame = +2
Query: 323 CNPRYKLVGNKYSICRMGRW-----------EEQLP-VCVKSGCPK---LPPITNGIQMT 457
CN YK G +S CR G + E QLP VCV PK + I +G +
Sbjct: 291 CNLGYKPTGPSFSTCRKGSFRPIIGKCSNGSEHQLPGVCVPLTPPKNARVVYIQSGTSLD 350
Query: 458 HHDGAWLMTFCLPNYRLEGSEVLYCNGYRWNSTA 559
DG + +C + + G L C +W ++
Sbjct: 351 FEDGTTALLYCEEGFAVTGVATLRCETGQWEPSS 384
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +2
Query: 362 ICRM-GRWEEQLPVCVKSGCPKLPPITNG---IQMTHHDGAWLMTFCLPNYRLEGSEVLY 529
+C+ G W P C C + P I NG ++ + + A T C +RL G E L
Sbjct: 587 VCQSDGIWSGSEPTCELVDCGRPPLIANGRVDVESSTFESAANYT-CHQGFRLIGPESLM 645
Query: 530 CNGY-RWNSTAPKCVEM 577
C W P C ++
Sbjct: 646 CGDRGEWQPATPFCYDI 662
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
protein F36H2.3 protein.
Length = 1388
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Frame = +2
Query: 296 TKSRIVKFVCNPRYKLVGNKYSICRMGRWEEQLPVCVKSG--------CPKLPPITNGIQ 451
T I CN + G+ S C G W + CV SG CP P + NG Q
Sbjct: 514 TSGTIATLACNLMNTVSGSSTSTCLSGVWNPTIGNCVSSGGTGGTGTTCPN-PTVING-Q 571
Query: 452 MTHHDG 469
+T++ G
Sbjct: 572 ITYNQG 577
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 13/115 (11%)
Frame = +2
Query: 266 YLQHGKARLRTKSRIVKFVCNPRYKLVGNKYSICRMGRWEEQLPVCVKS--------GCP 421
Y+Q + +CN Y L G+ ++C G W + C + C
Sbjct: 436 YMQSNPTVQYSSGTSAYLMCNLGYSLSGSVSTLCSNGVWSPSIGQCTNALALGQTTGNCE 495
Query: 422 KLPPITNGIQM-----THHDGAWLMTFCLPNYRLEGSEVLYCNGYRWNSTAPKCV 571
+P NG T+ G C + GS C WN T CV
Sbjct: 496 AIPTRINGTITYSSFGTYTSGTIATLACNLMNTVSGSSTSTCLSGVWNPTIGNCV 550
Score = 29.1 bits (62), Expect = 4.4
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Frame = +2
Query: 293 RTKSRIVKFVCNPRYKLVGNKYSICRMGRWEEQLPVC--------VKSGCPKLPPITNGI 448
R + CN Y + G+ S C G + L C + CP P + NG
Sbjct: 795 RPSGTVATLTCNSGYTISGSSQSTCTNGAFSPTLGTCNFGSSTGGTGTTCPN-PTVVNG- 852
Query: 449 QMTHHDGAWLMTFCLPNYRLEGSEVLYCN-GYRWNSTAPKCVEMNNNVTTIKYSCDF 616
Q+T+ G TF L + L CN GY + T+ MN T +C F
Sbjct: 853 QITYSQG---NTFDATRPALT-TATLTCNSGYTISGTSISAC-MNGVFTPTLGTCTF 904
>AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical
protein Y81B9A.1 protein.
Length = 579
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 430 WQFRAA*FNTDRQLLLPTTHP-TYRVFVPNQFISRVTYELHD 308
W FR R L+L TTHP YR+F ++ I E HD
Sbjct: 88 WGFRRECLQRTRALILNTTHPLKYRLFTDHRAIFIEAREPHD 129
>Z82058-5|CAI46585.1| 309|Caenorhabditis elegans Hypothetical
protein T27C5.12 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 545 WNSTAPKCVEMNNNVTTIKYSCDFEEDLCGW 637
WN T P M + T ++CDF +D W
Sbjct: 181 WNGTVPFTDRMILHTATYSWNCDFRKDFSKW 211
>AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical
protein Y54G11A.2 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 366 HIEYLFPTNLYLGLHTNFTILDLVRNLALPCCR 268
H++ L ++YL LH+ TI + L + CC+
Sbjct: 40 HVDKLSSAHVYLRLHSGMTIDSIPEALLIDCCQ 72
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 633 PQRSSSKSQLYLIVVTLLFISTHLGAV--LFHLYPLQYK 523
P+ S + LY++V+T+L +S + V L+ QYK
Sbjct: 560 PETCSEEKHLYIVVITVLLVSVTISLVSNLYQFIRAQYK 598
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 633 PQRSSSKSQLYLIVVTLLFISTHLGAV--LFHLYPLQYK 523
P+ S + LY++V+T+L +S + V L+ QYK
Sbjct: 562 PETCSEEKHLYIVVITVLLVSVTISLVSNLYQFIRAQYK 600
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 311 VKFVCNPRYKLVGNKYSICRMGRW 382
V F C P+Y + G+ +CR G W
Sbjct: 1205 VVFSCKPKYYIHGDIERVCRNGTW 1228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,642,132
Number of Sequences: 27780
Number of extensions: 405670
Number of successful extensions: 1085
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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