Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A09
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    28   0.099
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   4.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.5  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   8.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   8.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 28.3 bits (60), Expect = 0.099
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 599 KYSCDFEEDLCGWIQDEFHDFDWKRLNTKT----PSSFTLTGPWFDHTYGSRGKGHFMYI 766
           KY    E +  GW+++ F +FD K +N ++      ++     W    +  RG  + MYI
Sbjct: 30  KYPFGAEANTPGWVEESFTNFD-KGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYI 88

Query: 767 E 769
           E
Sbjct: 89  E 89


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 505 SVVREAERHEPSAIVMRHLNSIRYRWQFRAA*FNTD--RQLLLPTTHPTYRVFVP 347
           S+V +A+ H        ++  ++Y+W++    F +D  RQ  + +    Y+  VP
Sbjct: 13  SIVCQAKAHYSLRDFKANIFQVKYQWKYFDYNFGSDEKRQAAIQSGEYNYKNNVP 67


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +2

Query: 545  WNSTA-PKCVEMNNNVTTIKYSCDFEEDLCGWIQDEFH 655
            W  T   + VE++         C F ++L  W+ D  H
Sbjct: 908  WQVTLNARLVELSLGSNPWSCRCKFLQELSSWVSDNAH 945


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 497 NYRLEGSEVLYCNGYR 544
           NY     + LYCN YR
Sbjct: 90  NYNNNNYKKLYCNNYR 105


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 452 MTHHDGAWLMTFCLPN 499
           MTH   A+ + FC PN
Sbjct: 37  MTHTTNAFCLPFCGPN 52


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 452 MTHHDGAWLMTFCLPN 499
           MTH   A+ + FC PN
Sbjct: 36  MTHTTNAFCLPFCGPN 51


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 795 VSFMKRPVLSIYMKWPFPLEPY 730
           + F K P+  +  + P P+EP+
Sbjct: 65  IPFAKPPIGPLRFRKPLPIEPW 86


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 795 VSFMKRPVLSIYMKWPFPLEPY 730
           + F K P+  +  + P P+EP+
Sbjct: 65  IPFAKPPIGPLRFRKPLPIEPW 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,799
Number of Sequences: 438
Number of extensions: 5383
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)