Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A09
         (888 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim...    30   1.8  
At5g22570.1 68418.m02636 WRKY family transcription factor contai...    29   3.1  
At1g53430.1 68414.m06056 leucine-rich repeat family protein / pr...    29   4.1  
At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR...    29   5.4  
At3g61030.1 68416.m06828 C2 domain-containing protein similar to...    28   9.5  
At3g60950.1 68416.m06819 C2 domain-containing protein similar to...    28   9.5  

>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
           similar to BP-80 vacuolar sorting receptor [Pisum
           sativum] GI:1737222
          Length = 618

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -1

Query: 645 SCIQPQRSSSKSQ-LYLIVVTLLFISTHLGAVLFHLYPLQ-YKTSE 514
           +CI+ +RS S+S+ L+ IVV        LGA +F+ Y LQ Y  SE
Sbjct: 552 TCIE-RRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQSYMDSE 596


>At5g22570.1 68418.m02636 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain
          Length = 289

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 497 NYRLEGSEVLYCNGYRWNSTAPKCVEMNNNVTTIKYSCDFEED 625
           N+R +  + +Y +GY W     K ++ +N+  +  Y C + +D
Sbjct: 99  NWRDDSPDPIYYDGYLWRKYGQKSIKKSNHQRSY-YRCSYNKD 140


>At1g53430.1 68414.m06056 leucine-rich repeat family protein / protein
            kinase family protein contains Pfam domains PF00560:
            Leucine Rich Repeat and PF00069: Protein kinase domain
          Length = 1030

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 692  SSFTLTGPWFDHTYGSRGKGHFMYIESTGRFINDTARLLSPXYD 823
            SS ++ GPW D ++   GK   +  +  GR  + + +LL    D
Sbjct: 983  SSSSMDGPWVDSSFSEPGKDVSLQQQEEGRSSSSSRKLLDDLTD 1026


>At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1355

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 318  SYVTLDINWLGTNTLYVGWVVGRSSCRSVLNQA 416
            SY+   + W+G   +Y G++ G+S  R  + QA
Sbjct: 1141 SYLIKKLKWIGITVVYSGFMGGKSMSRPEVTQA 1173


>At3g61030.1 68416.m06828 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 679 IQSLPIEIVELVLYPTAEVLFEVATVLDRCYVVV 578
           + S+PI++ +L ++  A V+F++A  + R   VV
Sbjct: 108 VASIPIQLKDLQVFTVARVIFQLADEIPRISAVV 141


>At3g60950.1 68416.m06819 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 679 IQSLPIEIVELVLYPTAEVLFEVATVLDRCYVVV 578
           + S+PI++ +L ++  A V+F++A  + R   VV
Sbjct: 108 VASIPIQLKDLQVFTVARVIFQLADEIPRISAVV 141


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,478,760
Number of Sequences: 28952
Number of extensions: 372792
Number of successful extensions: 885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)