Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A06
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   1.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   7.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.3  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 187 FTKATHYFILPYFRLTIIDEN*TENTCMFDMMILLFSLFKF 65
           F +   YFI+  + LTI+  + T + C    M     +F F
Sbjct: 37  FCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFF 77


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 285 KIYLHTYYALLKFIINILY 341
           KI  + YY LL F+IN+LY
Sbjct: 94  KIRKNLYYLLL-FVINVLY 111


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 98  IKHTSILCLIFIYNC 142
           I + S++ LIF++NC
Sbjct: 237 ISNISLVSLIFLFNC 251


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 437 LFYLDLCYYAIIELKYRIPKFYF*C*FNKFS 529
           L +L   YY ++ L + +  +YF C F  F+
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYCAFIIFT 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,984
Number of Sequences: 336
Number of extensions: 2406
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)