Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A04
         (922 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.3  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 16/54 (29%), Positives = 19/54 (35%)
 Frame = -1

Query: 550 VXPXFGGXPFSRL*VSVXPLXPXARPSAXXQCPXXPGRAPXXIPXPPXSXPXPP 389
           + P F   P + L     PL P A+       P  P   P   P PP     PP
Sbjct: 543 IPPQFLPPPLNLLRAPFFPLNP-AQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 812 PPPPSXXRXPFXPVRP 859
           PPP +  R PF P+ P
Sbjct: 549 PPPLNLLRAPFFPLNP 564


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/48 (29%), Positives = 16/48 (33%)
 Frame = +2

Query: 719 PPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXPVRPR 862
           PP      +PPV   P T S S         PP       P    RP+
Sbjct: 630 PPSAYQQQQPPVVPPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPK 677


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = -2

Query: 864 PRGLTGXKGXLXXEGGGGAXXXEGKXADRDPVRGXFXTGG 745
           P G  G  G     GGGG    +    DRD  R     GG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGG 251



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 691 PPPYSDXXXSPPGKXXRAPSRXEPXP 768
           PPP +     PP     AP++ +P P
Sbjct: 918 PPPPTHRLEQPPQVVAAAPTQQQPLP 943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,453
Number of Sequences: 2352
Number of extensions: 7318
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)