Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A04
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.094
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.094
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.094
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 4.7
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.094
Identities = 37/161 (22%), Positives = 48/161 (29%), Gaps = 3/161 (1%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGN-RXGRAAXXXGALXRXARSXG-GGEXXHAHSKAGKRXPP 535
G G F Q G A G GN + G G G G+ + G
Sbjct: 144 GNQGGFGGQTGFSEAPQGFGNNQQGGFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGV 203
Query: 536 EXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXS-EVEKPXPPIQXX 712
G G Q+ N + PP + S P + P PP
Sbjct: 204 TASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS 263
Query: 713 XXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXR 835
PPR PP + P + + P +PPPP R
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Score = 32.7 bits (71), Expect = 0.38
Identities = 42/167 (25%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGNRXGRAAXXXGALXRXARSXGGGEXXHAHSKA------GK 523
G G QGG G G G A GG + + GK
Sbjct: 169 GFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGK 228
Query: 524 RXPPEXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXSEVEKPXPPI 703
R P G P G P A + PP S P P PP
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPA 285
Query: 704 QXXXXPPREXXXXRPPVXNX-PLTGSL------SAXFPSXXXAPPPP 823
PPR PP P TGSL + P+ +PPPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 746 PPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXP 850
PP + PL GS S P +PPPP P P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.094
Identities = 37/161 (22%), Positives = 48/161 (29%), Gaps = 3/161 (1%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGN-RXGRAAXXXGALXRXARSXG-GGEXXHAHSKAGKRXPP 535
G G F Q G A G GN + G G G G+ + G
Sbjct: 165 GNQGGFGGQTGFSEAPQGFGNNQQGGFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGV 224
Query: 536 EXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXS-EVEKPXPPIQXX 712
G G Q+ N + PP + S P + P PP
Sbjct: 225 TASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS 284
Query: 713 XXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXR 835
PPR PP + P + + P +PPPP R
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Score = 32.7 bits (71), Expect = 0.38
Identities = 42/167 (25%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGNRXGRAAXXXGALXRXARSXGGGEXXHAHSKA------GK 523
G G QGG G G G A GG + + GK
Sbjct: 190 GFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGK 249
Query: 524 RXPPEXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXSEVEKPXPPI 703
R P G P G P A + PP S P P PP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPA 306
Query: 704 QXXXXPPREXXXXRPPVXNX-PLTGSL------SAXFPSXXXAPPPP 823
PPR PP P TGSL + P+ +PPPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 746 PPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXP 850
PP + PL GS S P +PPPP P P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.094
Identities = 37/161 (22%), Positives = 48/161 (29%), Gaps = 3/161 (1%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGN-RXGRAAXXXGALXRXARSXG-GGEXXHAHSKAGKRXPP 535
G G F Q G A G GN + G G G G+ + G
Sbjct: 150 GNQGGFGGQTGFSEAPQGFGNNQQGGFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGV 209
Query: 536 EXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXS-EVEKPXPPIQXX 712
G G Q+ N + PP + S P + P PP
Sbjct: 210 TASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS 269
Query: 713 XXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXR 835
PPR PP + P + + P +PPPP R
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Score = 32.7 bits (71), Expect = 0.38
Identities = 42/167 (25%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Frame = +2
Query: 362 GXXGXFPVQGGVXXAXWGXGNRXGRAAXXXGALXRXARSXGGGEXXHAHSKA------GK 523
G G QGG G G G A GG + + GK
Sbjct: 175 GFGGNQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGK 234
Query: 524 RXPPEXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXSEVEKPXPPI 703
R P G P G P A + PP S P P PP
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPA 291
Query: 704 QXXXXPPREXXXXRPPVXNX-PLTGSL------SAXFPSXXXAPPPP 823
PPR PP P TGSL + P+ +PPPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 746 PPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXP 850
PP + PL GS S P +PPPP P P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.88
Identities = 28/119 (23%), Positives = 38/119 (31%), Gaps = 1/119 (0%)
Frame = +2
Query: 488 GEXXHAHSKAGKRXPPEXGXNAGXPXXP-GXPQKATNRXKAGXXXXXXRXPPXEEXSQXS 664
G+ +S++G P G AG P P G P K + P S
Sbjct: 92 GDTTKPNSQSGD-PKPRGGDPAGKPNPPAGDPSKTKPQGGDPAKPKPQTGDPYATNSTVK 150
Query: 665 XPXSEVEKPXPPIQXXXXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXP 841
P + P P ++ PP P + A P APPPP+ P
Sbjct: 151 -PATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPP 208
Score = 29.1 bits (62), Expect = 4.7
Identities = 33/141 (23%), Positives = 42/141 (29%), Gaps = 3/141 (2%)
Frame = +2
Query: 413 GXGNRXGRAAXXXGALXRXARSXGGGEXXHAHSKAGKRXPPEXGXNAGXPXX--PGXPQK 586
G G G+ G + S G AGK PP + P P P+
Sbjct: 79 GGGGPAGKPGPNAGDTTKP-NSQSGDPKPRGGDPAGKPNPPAGDPSKTKPQGGDPAKPKP 137
Query: 587 ATNRXKA-GXXXXXXRXPPXEEXSQXSXPXSEVEKPXPPIQXXXXPPREXXXXRPPVXNX 763
T A P E + + +E PP PP PP
Sbjct: 138 QTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPP-------PPTTKA 190
Query: 764 PLTGSLSAXFPSXXXAPPPPS 826
P + A P APPPP+
Sbjct: 191 PPPPTTKAPPPPTTKAPPPPT 211
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 32/131 (24%), Positives = 39/131 (29%), Gaps = 8/131 (6%)
Frame = +2
Query: 482 GGGEXXHAHSKAGKRXPPEXGXNAGXPXXP-GXPQKATNRXKAGXXXXXXRX-------P 637
G + A +R PP P P G PQ + A P
Sbjct: 112 GEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 171
Query: 638 PXEEXSQXSXPXSEVEKPXPPIQXXXXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPP 817
P E S + +P PP + PP PP P LSA + PP
Sbjct: 172 PTGEPQDLSTEGNASRRPPPPPKGTGTPP-------PPPTGEP--QDLSAEGYASRRPPP 222
Query: 818 PPSXXRXPFXP 850
PP P P
Sbjct: 223 PPKGTGSPTPP 233
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/119 (25%), Positives = 34/119 (28%), Gaps = 2/119 (1%)
Frame = +2
Query: 515 AGKRXPPEXGXNAGXPXXPGXPQKATNRXKAGXXXXXXRXPPXEEXSQXSXPXSEVEKPX 694
AG PP NAG PG P + P Q P + +P
Sbjct: 180 AGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQD-GQPG 238
Query: 695 PPIQXXXXPPREXXXXRPPVXNXP--LTGSLSAXFPSXXXAPPPPSXXRXPFXPVRPRG 865
P P PP P GS A P P PP P P +P G
Sbjct: 239 APGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGG 297
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +1
Query: 571 GXPAKSHKPXKGRXXXVXPXAPPPGGXITKXXAXVXGXKTPPPYSDXXXSPPG 729
G P K KP K P AP G K + KTPPP PPG
Sbjct: 116 GSPGKPGKPGK-------PGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPG 161
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 571 GXPAKSHKPXKGRXXXVXPXAPPPGGXITKXXAXVXGXKTPPPYSDXXXSPPG 729
G P K KP K P AP G K A KTPPP PPG
Sbjct: 115 GNPGKPGKPGK-------PGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPG 160
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Frame = +2
Query: 635 PPXEEXSQXSXPXSEVEKPXPPIQXXXXP-----PREXXXXRPPVXNXPLTGSLSAXFPS 799
PP ++ + P + P P +Q P P+ PPV P ++
Sbjct: 262 PPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTR 321
Query: 800 XXXAPPPPSXXRXP 841
APP P+ + P
Sbjct: 322 AAPAPPKPAPQQAP 335
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 822 GGGGAXXXEGKXADRDPVRGXFXTGGR 742
GGGG G+ DR RG F GGR
Sbjct: 9 GGGGGGFRGGRGGDRGGSRGGFGGGGR 35
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 419 GNRXGRAAXXXGALXRXARSXGGGEXXHAHSKAGKRXPPEXGXNAGXPXXPGXP 580
GNR R A + A S GG + AG P G P PG P
Sbjct: 73 GNRTARQAGYDAGVTGGAASAGGCDACCLPGAAGPAGTPGKPGRPGKPGAPGLP 126
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 695 PPIQXXXXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXPVRP 859
PPI PP PP P G P PPPP P PV P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-----PPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 695 PPIQXXXXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXPVRP 859
PPI PP PP P G P PPPP P PV P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-----PPPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +2
Query: 695 PPIQXXXXPPREXXXXRPPVXNXPLTGSLSAXFPSXXXAPPPPSXXRXPFXPVRP 859
PPI PP PP P G P PPPP P PV P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP-----PPPPPGMFAPMAPVIP 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,653,026
Number of Sequences: 27780
Number of extensions: 225018
Number of successful extensions: 999
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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