Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_A03
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 70 4e-13
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 70 4e-13
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 63 4e-11
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 46 7e-06
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 45 1e-05
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 29 0.67
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.67
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.89
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.7
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.3
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 22 9.4
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 70.1 bits (164), Expect = 4e-13
Identities = 42/102 (41%), Positives = 55/102 (53%)
Frame = +2
Query: 362 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 541
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 542 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 667
+ V R ++++ KLW HR LV A +L DL LE+
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEY 110
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 70.1 bits (164), Expect = 4e-13
Identities = 39/98 (39%), Positives = 54/98 (55%)
Frame = +2
Query: 374 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 553
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 554 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 667
R+D +++ KLW H + V A +L DL L++
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKALEKTLKDLKLDY 111
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 63.3 bits (147), Expect = 4e-11
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +2
Query: 347 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 526
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 527 AIKNKIDDGTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLG 658
AI + + V+R ++F+ KL S ++ T A R SL LG
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYST---RAAIRSSLHHLG 106
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 46.0 bits (104), Expect = 7e-06
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Frame = +2
Query: 368 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 547
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 548 DGTVRRDELFIMGKL------WSTFHRTDLVETACRISLADLGL 661
+ +R++++ KL ST D AC + DL L
Sbjct: 66 ETGTKREDIWFTSKLNDLSGYKSTLSSIDASVKACGLGYIDLFL 109
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 45.2 bits (102), Expect = 1e-05
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +2
Query: 392 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 553
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 554 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEF 667
V R +LFI K+ H D + A SL LG ++
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDY 102
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 437 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIK 535
T ++ A D+G DTA IY N E ++GKAIK
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.67
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 341 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 520
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 521 GKAIKNKIDDGTVRRDEL 574
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.89
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -2
Query: 336 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 172
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 393 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 262
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 387 VPSRSFKVATSFTLPFSLASFSSAILV 307
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 465 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 319
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 354 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 211
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 22.2 bits (45), Expect(2) = 9.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -2
Query: 471 PISIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFK 367
P+++ + +V + S VP+++ ++ PSR K
Sbjct: 131 PLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRFIK 165
Score = 21.4 bits (43), Expect(2) = 9.4
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 633 QAVSTRSVRWNVLHNLPIMKSSSRLTVPSS 544
Q+ S +++W + I+K ++ VP+S
Sbjct: 75 QSSSLNNLKWKDVEGPNILKPIKKIAVPAS 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,510,646
Number of Sequences: 5004
Number of extensions: 47940
Number of successful extensions: 177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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