Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_A02
         (925 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033113-1|AAH33113.1|  208|Homo sapiens chromosome 17 open read...    66   2e-10
AY074907-1|AAO12163.1|  208|Homo sapiens chromosome 17 open read...    66   2e-10
AK223584-1|BAD97304.1|  208|Homo sapiens hypothetical protein MG...    66   2e-10

>BC033113-1|AAH33113.1|  208|Homo sapiens chromosome 17 open reading
           frame 32 protein.
          Length = 208

 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 232 LYQHLQQRRINGETVPYLHELLEGATIEMPGNKVLKRNPVLEARCVKLRAQQEAREYRKM 411
           L+QHL++R    ++  YLHELLEG+ I +P      RNP L AR  K++ Q    EY+++
Sbjct: 63  LHQHLRER----DSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRI 118

Query: 412 TKGV--DNVRMRFPEDSISYQLKQVNRQLIAIGQFIISIFAGFLFGFXGVEWMIGSLDFG 585
           T+ V   + R       +  Q++ +   +I I  FI+++ A F+  + G +++    +  
Sbjct: 119 TRNVTCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIF--TEMA 176

Query: 586 FRLLLGVMCALVIALA 633
            R+L  ++ A V+ LA
Sbjct: 177 SRVLAALIVASVVGLA 192


>AY074907-1|AAO12163.1|  208|Homo sapiens chromosome 17 open reading
           frame 32 protein.
          Length = 208

 Score = 66.1 bits (154), Expect = 2e-10
 Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 232 LYQHLQQRRINGETVPYLHELLEGATIEMPGNKVLKRNPVLEARCVKLRAQQEAREYRKM 411
           L+QHL++R    ++  YLHELLEG+ I +P      RNP L AR  K++ Q    EY+++
Sbjct: 63  LHQHLRER----DSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRI 118

Query: 412 TKGV--DNVRMRFPEDSISYQLKQVNRQLIAIGQFIISIFAGFLFGFXGVEWMIGSLDFG 585
           T+ V   + R       +  Q++ +   +I I  FI+++ A F+  + G +++    +  
Sbjct: 119 TRNVTCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIF--TEMA 176

Query: 586 FRLLLGVMCALVIALA 633
            R+L  ++ A V+ LA
Sbjct: 177 SRVLAALIVASVVGLA 192


>AK223584-1|BAD97304.1|  208|Homo sapiens hypothetical protein
           MGC45714 variant protein.
          Length = 208

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 232 LYQHLQQRRINGETVPYLHELLEGATIEMPGNKVLKRNPVLEARCVKLRAQQEAREYRKM 411
           L+QHL++R    ++  YLHELLEG+ I +P      RNP L AR  K++ Q    EY+++
Sbjct: 63  LHQHLRER----DSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRI 118

Query: 412 TKGV--DNVRMRFPEDSISYQLKQVNRQLIAIGQFIISIFAGFLFGFXGVEWMIGSLDFG 585
           T+ +   + R       +  Q++ +   +I I  FI+++ A F+  + G +++    +  
Sbjct: 119 TRNITCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIF--TEMA 176

Query: 586 FRLLLGVMCALVIALA 633
            R+L  ++ A V+ LA
Sbjct: 177 SRVLAALIVASVVGLA 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,339,339
Number of Sequences: 237096
Number of extensions: 1582432
Number of successful extensions: 7240
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7240
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)