Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P24
(931 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 125 1e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 91 5e-17
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 88 3e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 57 7e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 4e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 50 8e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 42 0.023
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 42 0.030
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 39 0.16
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 37 0.64
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 2.0
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 6.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 6.0
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.9
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.9
UniRef50_Q9NNW5 Cluster: WD repeat-containing protein 6; n=21; E... 33 7.9
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 7.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 125 bits (302), Expect = 1e-27
Identities = 77/125 (61%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = +2
Query: 497 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXPT 676
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF-R 60
Query: 677 PAAYRIPVRLSPFGKRGAFS*LTL*VSQFGVG-RSLQAGLCART-PRFSPTAAPYPVTIV 850
P R+P PF R A+ L V RS T P FSPTAAPYPVTIV
Sbjct: 61 PC--RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIV 118
Query: 851 LXSTR 865
L TR
Sbjct: 119 LSPTR 123
Score = 110 bits (265), Expect = 4e-23
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 676 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQP 819
PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP P
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 90.6 bits (215), Expect = 5e-17
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +2
Query: 515 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 667
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALL 94
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/71 (63%), Positives = 51/71 (71%)
Frame = +2
Query: 521 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXPTPAAYRIPV 700
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALL + +PV
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF---LPFGLPV 134
Query: 701 RLSPFGKRGAF 733
+G+ +F
Sbjct: 135 SFRCYGRGFSF 145
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 328 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 426
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -2
Query: 570 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 391
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 687 TGYLSAFLPSGSVALSHSSRCRYLSSV 767
TGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 11 TGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -2
Query: 795 HSPAWSERPTPN*DTYSVSYEKAPRFPKGE 706
+SPAWSERP P+ DT SVSYEKAPRFPKG+
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Score = 39.5 bits (88), Expect = 0.12
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -1
Query: 865 PGXXQDDSYRIRRSGRAEXGGSCTQPSLERTTYTELRYLQREL*ESATLPEGRKADRYPV 686
PG QDDSYR RS RAE G P+ ++ P+G+KA++
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 685 SGRGRXQESARGSFQGETP 629
+GR + + G+ ++P
Sbjct: 68 KRQGRNRRAHEGAAGEKSP 86
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.4 bits (125), Expect = 4e-06
Identities = 31/54 (57%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 304 CINXSANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 462
CI A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 50.0 bits (114), Expect = 8e-05
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +1
Query: 700 PPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQP 819
PPFSL + + GIS RCRSFAPSWAV NPP P
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSP 98
Score = 48.4 bits (110), Expect = 3e-04
Identities = 42/108 (38%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +2
Query: 590 VRGGETRQDYKDTRRFPLEAPSCALLXPTPAAYRIPVRLSPFGKRGAFS*LTL*VSQFGV 769
VR GETRQD K P AL PA RIPV PF G+ + S G+
Sbjct: 23 VRSGETRQDLKIITVSDESLP-LALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGI 77
Query: 770 G---RSLQAGLC-ARTPRFSPTAAPYPVTIVLXSTR*XRXIPPGXXPW 901
RS ++ P FSPTAAPYPVT+ L TR G W
Sbjct: 78 SARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 464 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 643
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 644 EAPSCALLXP 673
++PS +LL P
Sbjct: 104 QSPSYSLLFP 113
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 106 DPDMIRYIDEFGQTTTRMQ 162
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.9 bits (94), Expect = 0.023
Identities = 22/34 (64%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 868 LPGXXQDDSYRIRRSGRAEXGGSCTQPS-LERTT 770
LPG QDDSYRIRRSGRAE G P+ ER T
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40
Score = 33.5 bits (73), Expect = 7.9
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 795 HSPAWSERPTPN 760
HSPAWSERPTPN
Sbjct: 31 HSPAWSERPTPN 42
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 41.5 bits (93), Expect = 0.030
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +1
Query: 805 PPXQPDRCALSGNYRLXFXPVXTXYPP 885
PP QPDRCALSGNYRL PV P
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 39.1 bits (87), Expect = 0.16
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2
Query: 230 INKLTTTIAFILCFRFRXEVWEVFSALMXRPTRGERRFAYW 352
+++LT L RF V +ALM RPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.1 bits (82), Expect = 0.64
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 374 ERGSGRAPNTQTASPRALAXSLMQ 303
+R + APNTQTASPRALA SLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 2.0
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -2
Query: 597 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 427
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 426 SELIPL 409
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 6.0
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 637 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 458
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 457 DSVD 446
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 6.0
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 264 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 100
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.9
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 431 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 610
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 611 QDYKDT 628
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 437 NTVIHRIRGITQERTCE 487
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q9NNW5 Cluster: WD repeat-containing protein 6; n=21;
Eutheria|Rep: WD repeat-containing protein 6 - Homo
sapiens (Human)
Length = 1121
Score = 33.5 bits (73), Expect = 7.9
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 643 GSSLVRSPXXDPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQPD 822
G L P D C L C + +AW+ L A +S + + P+ A+ N P PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202
Query: 823 RCALSGNYRLXF 858
R +SG+ + F
Sbjct: 203 R-RISGHVGIIF 213
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.5 bits (73), Expect = 7.9
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 730 SATLPEGRKA--DRYPVSGRGRXQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 557
S+TL + R +R G G Q S+ G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 556 GGAYGKTPATRPFYGSWP 503
G + +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,919,349
Number of Sequences: 1657284
Number of extensions: 15824839
Number of successful extensions: 40078
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 38216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40048
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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