Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P23
(1135 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 33 0.32
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 33 0.42
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 33 0.56
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 1.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.7
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 31 2.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 30 4.0
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 30 4.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 9.1
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 9.1
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 29 9.1
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 33.5 bits (73), Expect = 0.32
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Frame = -3
Query: 662 PXXSLRXXAXARPXXSXPXPPPLXX----PPXLSPRXXPXXXLPPXXSPTAXXAXLLLAP 495
P SLR A P PPPL PP P LPP + + +P
Sbjct: 437 PLPSLRASAATLPPLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSP 496
Query: 494 LXPPXPXXHVHPSXLSXXPV 435
PP P H + L P+
Sbjct: 497 KQPPLPPKHSNGPPLRQTPM 516
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Frame = -1
Query: 754 PAXXLXPPAXPFXXPFTXXGPPAXPTMXSXVPXXLS-APVLXLAXPXPXPXXPRXSXHPX 578
PA PP P FT PP P + +P P L+ P P P P
Sbjct: 291 PAVVTAPPPAPPLPNFTSPSPPPPPPLPPAMPAMDDLLPPEVLSPPPPPPPSEDFYSMPS 350
Query: 577 SLLA------VYHXAXSLPXXLXPPAXPL 509
SL +Y +LP + PP P+
Sbjct: 351 SLPMPSPPEDLYDAPATLPSPIMPPPPPM 379
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 32.7 bits (71), Expect = 0.56
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 617 SXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPP 483
S P PPP PP ++ R P PP P + A PL PP
Sbjct: 252 SVPIPPPTKPPPRVASRRPP----PPLPPPDSSEAQAQQPPLSPP 292
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 32.3 bits (70), Expect = 0.74
Identities = 26/103 (25%), Positives = 29/103 (28%)
Frame = -3
Query: 734 PRTPXXSPLYXXXPACXXYDXFTXPXXSLRXXAXARPXXSXPXPPPLXXPPXLSPRXXPX 555
P P P P T P + RP P PP PP + P
Sbjct: 913 PLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPT---PPPPTSALPPPIPATQVPP 969
Query: 554 XXLPPXXSPTAXXAXLLLAPLXPPXPXXHVHPSXLSXXPVFFP 426
LPP P AP PP H + FFP
Sbjct: 970 PPLPP-LPPPPPPVQTTTAPTLPPASCMPTHEGTSNGACCFFP 1011
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -3
Query: 1040 TXXTXLTLLPRSAPPPXRNXXHPPXHXT--PPTXLPPXXPYP 921
T T R PPP + PP T PP LPP P P
Sbjct: 938 TTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPLPPPP 979
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.3 bits (70), Expect = 0.74
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 1001 PPPXRNXXHPPXHXTPPTXLPPXXPYP 921
PPP PP + PP PP PYP
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYP 175
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXP------PXPXXHV 465
P P PPP PP +P P P P AP P P P
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP 155
Query: 464 HPSXLSXXPVFFPXIXSXYSPSXXPXP 384
+P L P P + Y P P P
Sbjct: 156 YPPPLYPPPPNPPPPNAPYPPPPYPPP 182
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 1013 PRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
P PP N +PP PP PP PYP
Sbjct: 112 PNPPYPPPPNAPYPPP-PNPPYPPPPNAPYP 141
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +1
Query: 448 ESXDGWTXXXGXGGXRGARRRXAXXAVGEXXGGXXXXGXXRGERXGGXXSGGGXGXXXXG 627
E DG RG R G GG G RG GG GG G G
Sbjct: 73 EDLDGRPMKVNKAQPRGERGGGGSQGGGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGG 132
Query: 628 RAXAXXRREXXG 663
+ RR+ G
Sbjct: 133 GSYGGGRRDYGG 144
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
P P PPP PP SP P PP P P PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
P P PPP PP P P PP P A P PP P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
P P PPP PP P P PP P P PP P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 1013 PRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
P S PPP + PP PP PP P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
P P PPP PP P P PP P P PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 629 RPXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXP 486
+P P PPP PP P P PP P L LA P
Sbjct: 394 QPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 1025 LTLLPRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
+ + P PPP PP PP PP P P
Sbjct: 361 INMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQP 395
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = -3
Query: 626 PXXSXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
P P PPP PP SP P PP SP A L P PP P
Sbjct: 208 PPRPPPSPPPPPPPPSPSPPRPPP---PPPPSPPRPLAAKL--PEPPPIP 252
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 1001 PPPXRNXXHPPXHXTPPTXLPPXXPYP 921
PPP R PP PP+ PP P P
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = +2
Query: 824 GXGLXRGSRGGXXXRXXGXXXREXXXXXXKIXXGRXXEXGGV*XAXRGGGGXXSXXXXVG 1003
G G RGS GG G R ++ G GG +GGG +G
Sbjct: 281 GGGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGMGRGPGGGWGRMQGGGMGRGPGGGLG 340
Query: 1004 RXGEGG*GR 1030
R GG GR
Sbjct: 341 RGPGGGWGR 349
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 1013 PRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
P S PPP N PP PPT PP P P
Sbjct: 354 PPSPPPPTNNTPPPP----PPTNKPPPPPPP 380
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.3 bits (65), Expect = 3.0
Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = -3
Query: 617 SXPXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAP----LXPPXPXXHVHPSXL 450
S P PP + PP P PP P L+ P + PP + P +
Sbjct: 360 SFPPPPIIPIPPPAMPAMFNPHVPPPMIGPVTVPPPPLIPPPQASIPPPTMIQTLPPPSV 419
Query: 449 SXXPVFFPXIXSXYSPSXXP 390
P+ P S P+ P
Sbjct: 420 PPPPIGVPNRPSVLYPNNNP 439
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 1013 PRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
P + PPP PP PP PP P P
Sbjct: 62 PAAPPPPAAAPAAPPPPAAPPAAPPPPPPLP 92
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +1
Query: 427 GKKTGXXESXDGWTXXXGXGGXRGARRRXAXXAVGEXXGGXXXXGXXRGERXGGXXSGGG 606
G++ G E GW G G A AVG GG GG SGGG
Sbjct: 192 GERGGSIEK--GWVGGRAGGMNSGYNGGPAPGAVGGFGGGGGGSEDNGASGGGGGYSGGG 249
Query: 607 XG 612
G
Sbjct: 250 SG 251
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 29.9 bits (64), Expect = 4.0
Identities = 35/157 (22%), Positives = 47/157 (29%), Gaps = 5/157 (3%)
Frame = -3
Query: 596 LXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXPXXHVHPSXLSXXPVF--FPX 423
L PP P +PP P+ L P PP P + PS P +P
Sbjct: 258 LPSPPRYPPSPLRYPPIPPRYPPSLIRYPTL-PPRYPPSPPRYP-PSPPRYPPSLHRYPQ 315
Query: 422 IXSXYSPS---XXPXPXXXIXXXXXXXXXXXXXLRTPXYSTPXAXSXXFSXPSKSXASIX 252
Y PS P P +P P S P + +
Sbjct: 316 SPLRYPPSPIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRYPPSPPRYPSSHPRYPPSPLR 375
Query: 251 XLPVHXYXXPXXXXFPXSHXPXHXPXHSXXXXTRLKF 141
LP P +P SH P + P H + L++
Sbjct: 376 YLPSPIRYPPSHSRYPSSH-PRYPPSHLRYPPSSLRY 411
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 1007 SAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
S P P N HPP H PP PP P
Sbjct: 475 SGPSPW-NMQHPPQHRAPPGQYPPLGASP 502
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 605 PPPLXXPPX-LSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXPXXH 468
PPP+ PP P P PP +P + + P+ PP H
Sbjct: 2174 PPPMGAPPSGPPPMGAPPSGPPPMGTPPSGHPPMGAPPMGPPPSGSH 2220
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 611 PXPPPLXXPPXLSPRXXPXXXLPPXXSPT 525
P PPP PP P P PP PT
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPPPPPPT 495
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 602 PPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPP 483
PP PP + P LPP P A + PL PP
Sbjct: 2609 PPQMMPPMVPMMLPPMLPLPPPGLPMQPEAPVQPPPLPPP 2648
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 1010 RSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
R PP HPP + PT PP YP
Sbjct: 282 RPFPPAVHAPYHPPPAYSNPTYQPPASTYP 311
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,141
Number of Sequences: 59808
Number of extensions: 166879
Number of successful extensions: 1025
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3486073542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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