Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P23
         (1135 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = +1

Query: 478 GXGGXRGARRRXAXXAVGEXXGGXXXXGXXRGERXGGXXSGGGXG 612
           G G   G+R   A    G    G    G  RG    G   GGG G
Sbjct: 522 GSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGG 566



 Score = 23.8 bits (49), Expect = 9.5
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = +1

Query: 541 GGXXXXGXXRGERXG--GXXSGGGXGXXXXGRAXAXXRRE 654
           GG    G  RG   G  G  SGGG      G   +  RR+
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGSSTTRRD 879


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 632 ARPXXSXPXPPPLXXPP 582
           A+P  + P PPP+  PP
Sbjct: 579 AQPPPAPPPPPPMGPPP 595


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = -3

Query: 611 PXPPPLXXPPXLSPRXXPXXXLPPXXSPTAXXAXLLLAPLXPPXP 477
           P PPP    P   PR      L P  S  A      +    PP P
Sbjct: 787 PPPPPSSLSPGGVPRPTVLQKLDPQLSEEAAAVGANVEQRVPPLP 831


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 10/31 (32%), Positives = 11/31 (35%)
 Frame = -3

Query: 1013 PRSAPPPXRNXXHPPXHXTPPTXLPPXXPYP 921
            P    PP      PP +  PP    P  P P
Sbjct: 181  PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQP 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,791
Number of Sequences: 2352
Number of extensions: 4986
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)