Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P22
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0453 - 34031862-34032668                                         30   2.1  
11_04_0457 + 17916177-17916526,17917397-17917523,17917887-179182...    30   2.8  
09_04_0666 + 19318512-19318578,19319185-19319273,19321344-193221...    30   2.8  

>03_06_0453 - 34031862-34032668
          Length = 268

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 625 PTMIDEAEVRWVIERPPIFLNSLHRKSDKEIEGGELRWVK 744
           P +  +  VR  ++ PP+  + L  +++  I GGELRWV+
Sbjct: 71  PVLTVQESVRATLDSPPLLSSLLPHRANL-IGGGELRWVQ 109


>11_04_0457 +
           17916177-17916526,17917397-17917523,17917887-17918287,
           17918496-17918704,17919328-17919449,17920437-17920562,
           17920675-17920801,17920945-17921000
          Length = 505

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 247 EIMGDIVELNSTEGQVLYRANSSAIRIRVSFPLSAEPHITFYSKFPPHQELYQLYIGDV 423
           +I+  +  +N    Q    ++ SAI     FPL    H   Y K P  +  Y++++GD+
Sbjct: 294 DIVSSVHYVNERYPQAGTSSSGSAIPPLTMFPLELASHKILYEKIPTGE--YKIFLGDI 350


>09_04_0666 +
           19318512-19318578,19319185-19319273,19321344-19322171,
           19322264-19322419,19322507-19322881
          Length = 504

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 300 VKNLAFSGIQFYNISHDFQLINWH*ILSNWYIARLTCGLYKLNTD 166
           +K+L F    FYN S  + L +W  I     I  LT G+   NT+
Sbjct: 114 IKSLRFESGIFYNASTSYYLDSWLQIAVTPLIEELTLGILSYNTN 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,980,403
Number of Sequences: 37544
Number of extensions: 406598
Number of successful extensions: 799
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)