Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P20
         (906 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56E9E Cluster: PREDICTED: similar to CG10869-PA...    89   2e-16
UniRef50_A7RZM9 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.1  
UniRef50_Q3WHV3 Cluster: Putative uncharacterized protein; n=1; ...    35   3.3  
UniRef50_A4VH70 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_UPI00003AE2FD Cluster: UPI00003AE2FD related cluster; n...    33   7.6  
UniRef50_A0EVH6 Cluster: Milt putative polyprotein; n=1; Zea may...    33   7.6  

>UniRef50_UPI0000D56E9E Cluster: PREDICTED: similar to CG10869-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10869-PA - Tribolium castaneum
          Length = 978

 Score = 88.6 bits (210), Expect = 2e-16
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +3

Query: 123 SESDKHLCNRYCGGSHTVTTPAQRVARLGHFIKQWGPDVLPLSSGLATGDDGKMYRVTD 299
           ++   HLCNRYCGGSHT TTP QRV RLGHF++QWGP++ PL      G+D  MY+  D
Sbjct: 724 NKEKNHLCNRYCGGSHTTTTPQQRVTRLGHFLEQWGPEIAPLQDEYIRGNDNHMYKARD 782


>UniRef50_A7RZM9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 608

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 17/61 (27%), Positives = 36/61 (59%)
 Frame = +3

Query: 231 PDVLPLSSGLATGDDGKMYRVTDVESANVGPGGAVDQTCTPKSPQKKSDTNKTQHKSSAI 410
           P   PL SG +TG+  +  RVT +++ ++ P  ++++T TP S   ++ T+ T   ++ +
Sbjct: 500 PPPTPLISGRSTGEKAQHRRVTSLQADSLTPELSINKTITPTSGNDRTLTSDTPDDATPV 559

Query: 411 S 413
           +
Sbjct: 560 A 560


>UniRef50_Q3WHV3 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 184

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 294 TDVESANVGPGGAVDQTCTPKSPQKKSDTNKTQHKSSAISPEC 422
           TD E   + P G      TP +P+  SD  +  H+S+ + P C
Sbjct: 142 TDAEQKRLRPAGLPPSFGTPLAPRWPSDAQQAHHRSAGLPPSC 184


>UniRef50_A4VH70 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 583

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 24/105 (22%), Positives = 42/105 (40%)
 Frame = +3

Query: 66  LHXWENXDKHVTKQPPRPKSESDKHLCNRYCGGSHTVTTPAQRVARLGHFIKQWGPDVLP 245
           +H  +   +H++    R  +     + + +  GS  V   AQ  A+LG   + WG  +L 
Sbjct: 108 IHNGKPDSRHLSGYAERYYNGPSAEILDAFVFGSTAVGDEAQLSAKLGKHTQYWGESILA 167

Query: 246 LSSGLATGDDGKMYRVTDVESANVGPGGAVDQTCTPKSPQKKSDT 380
            + G + G  G      D+  A   PG    +   P++    S T
Sbjct: 168 FAHGNSYGQSG-----LDISKALAIPGTEAKELFIPRNQLSTSLT 207


>UniRef50_UPI00003AE2FD Cluster: UPI00003AE2FD related cluster; n=1;
           Gallus gallus|Rep: UPI00003AE2FD UniRef100 entry -
           Gallus gallus
          Length = 117

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 22/48 (45%), Positives = 27/48 (56%)
 Frame = -3

Query: 355 FGVHV*STAPPGPTFALSTSVTRYIFPSSPVASPDDNGSTSGPHCLMK 212
           F VH  +T+PP    AL      Y+FPSS V SP++ GS  G  CL K
Sbjct: 73  FAVH--TTSPPEKPAAL-----HYLFPSSQVGSPNEPGS-PGASCLCK 112


>UniRef50_A0EVH6 Cluster: Milt putative polyprotein; n=1; Zea
           mays|Rep: Milt putative polyprotein - Zea mays (Maize)
          Length = 340

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 228 GPDVLPLSSGLATGDDGKMYRVTDVESANVGPGGAVDQTCTPKSPQKKSDTNK 386
           G  VLP  +G +    G      D  +A VGP GA + TC P S + +   N+
Sbjct: 88  GSQVLPDVNGQSEDSTGPSDPPADRPTAQVGPSGAPEVTCDPPSAEGRYKYNR 140


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,767,433
Number of Sequences: 1657284
Number of extensions: 10391005
Number of successful extensions: 30177
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30166
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)