SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P19
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   122   9e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    89   1e-16
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    85   3e-15
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    77   8e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    72   2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    69   1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    69   2e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    56   2e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4...    56   2e-06
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2...    55   3e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    46   0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru...    45   0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    44   0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob...    40   0.083
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ...    39   0.15 
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;...    36   1.8  
UniRef50_UPI0000F2C98A Cluster: PREDICTED: similar to CG9434-PA;...    34   4.1  
UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amida...    34   5.5  
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh...    33   7.2  
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet...    33   7.2  
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar...    33   9.6  
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ...    33   9.6  
UniRef50_Q2HGJ7 Cluster: Predicted protein; n=1; Chaetomium glob...    33   9.6  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  122 bits (295), Expect = 9e-27
 Identities = 56/79 (70%), Positives = 57/79 (72%)
 Frame = +1

Query: 625 PWKLPRALSLFRPCRLPGYCPPFSLREAWRXLIAHAVGISVRCRSFAPSWGCVXNPPFSP 804
           P + P    LFRPCRLP  CPPFSLREAWR LIAHAVGISVRCRSFAPSW    NPPFSP
Sbjct: 49  PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108

Query: 805 TAAPYPXNYRLXSTRVXPT 861
           TAAPYP    L  TR   T
Sbjct: 109 TAAPYPVTIVLSPTRKDTT 127



 Score = 96.3 bits (229), Expect = 9e-19
 Identities = 47/56 (83%), Positives = 48/56 (85%)
 Frame = +3

Query: 483 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650
           SK+  T    R  RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 57


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 89.0 bits (211), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +3

Query: 501 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650
           V+ PR  RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCAL
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 84.6 bits (200), Expect = 3e-15
 Identities = 40/48 (83%), Positives = 41/48 (85%)
 Frame = +3

Query: 507 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650
           RPR  RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCAL
Sbjct: 78  RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125



 Score = 52.8 bits (121), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +2

Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 412
           R   +C  G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 76.6 bits (180), Expect = 8e-13
 Identities = 44/84 (52%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 604 IKIPGVSPWKLPRALSLFRPC--RLPGYCPPFSLREAWRXLIAHAVGISVRCRSFAPSWG 777
           +KI  VS   LP ALS   P   R+P   PPFSL  +     +   GIS RCRSFAPSW 
Sbjct: 32  LKIITVSDESLPLALSCSNPAVSRIP--VPPFSLAGSVALSHSSHSGISARCRSFAPSWA 89

Query: 778 CVXNPPFSPTAAPYPXNYRLXSTR 849
              NPPFSPTAAPYP    L  TR
Sbjct: 90  VSKNPPFSPTAAPYPVTVHLSPTR 113


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 72.1 bits (169), Expect = 2e-11
 Identities = 40/82 (48%), Positives = 48/82 (58%)
 Frame = -1

Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN*DTYSVSYEXAPRFPKGE 691
           +A  R  PG  +    R  RS RAERGV   +PAWSERP P+ DT SVSYE APRFPKG+
Sbjct: 1   MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60

Query: 690 RRTVSR*AAGSEQGERTRELPG 625
           +   +   +G  QG   R   G
Sbjct: 61  K---AEQVSGKRQGRNRRAHEG 79



 Score = 44.4 bits (100), Expect = 0.004
 Identities = 29/94 (30%), Positives = 37/94 (39%)
 Frame = -3

Query: 856 VLPGWXQDDSXPDKAQRSG*TGGXAHSPSLERTTYTXXXXXXXXXXXXATLPEGRKADSI 677
           V PGW QDDS           G  A+SP+                      P+G+KA+ +
Sbjct: 6   VRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65

Query: 676 PVSGRVGTGRAHEGASRGKRLVSL*SCRVSPPLT 575
               +    RAHEGA+  K   SL      PPLT
Sbjct: 66  SGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 41/60 (68%), Positives = 42/60 (70%)
 Frame = -3

Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 377
           MLVRGAEPMEKR +  L  V   LL  CS  L    PLILWITVLPPLSEL PLAA ERP
Sbjct: 1   MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 68.5 bits (160), Expect = 2e-10
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 651 PVPTLPLTGILSAFLPSGSVAXSHSSRCRYLSSV 752
           PVPTLPLTG LSAFLPSGSVA SHSSRCRYLSSV
Sbjct: 4   PVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 55.6 bits (128), Expect = 2e-06
 Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +2

Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 448
           CI + A AR EAV VL ALPL RS TRC RS GCG      +  R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319


>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
           Bacteria|Rep: Putative uncharacterized protein 1 -
           Escherichia coli
          Length = 42

 Score = 55.6 bits (128), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)
 Frame = -1

Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN 745
           +A+ R  PG  +    RIRRSGRAERGV   +PAWSERPTPN
Sbjct: 1   MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42


>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           1 - Escherichia coli
          Length = 47

 Score = 54.8 bits (126), Expect = 3e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN*DT 736
           +A  R +PG  +    RIRRS RAERGV   +PAWSERPTP+ DT
Sbjct: 1   MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 25/70 (35%), Positives = 37/70 (52%)
 Frame = +3

Query: 450 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 629
           I  +R   + + + P T        F   S PLT+ITKI  Q +  +T+ +YK T  FPL
Sbjct: 44  IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103

Query: 630 EAPSCALPVP 659
           ++PS +L  P
Sbjct: 104 QSPSYSLLFP 113


>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
           Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
           (SV40)
          Length = 364

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 92  DPDMIRYIDEFGQTTTRMQ 148
           DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 44.0 bits (99), Expect = 0.005
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 216 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 338
           +++LT      L  RF V    V +ALMNRPTRGERRFAYW
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41


>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
           Enterobacteriaceae|Rep: Lactose operon repressor -
           Escherichia coli (strain K12)
          Length = 360

 Score = 39.9 bits (89), Expect = 0.083
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -1

Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
           +R +  APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348


>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
           cellular organisms|Rep: Uncharacterized 9.4 kDa protein
           - Escherichia coli
          Length = 84

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +3

Query: 786 QPPVQPDRCALSG*LSS*XHPGXTDLSPLXA 878
           +PPVQPDRCALSG      +P   DLSPL A
Sbjct: 3   EPPVQPDRCALSGNYRLESNPVRHDLSPLAA 33


>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
           Janthinobacterium sp. Marseille|Rep: Uncharacterized
           conserved protein - Janthinobacterium sp. (strain
           Marseille) (Minibacterium massiliensis)
          Length = 212

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = -3

Query: 583 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 413
           PLT AS+ + L+    P+ + + RGL    T+ G ++A     +S V  L+L  T+L PL
Sbjct: 50  PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109

Query: 412 SELIPL 395
            +L+ L
Sbjct: 110 LQLLIL 115


>UniRef50_UPI0000F2C98A Cluster: PREDICTED: similar to CG9434-PA;
           n=1; Monodelphis domestica|Rep: PREDICTED: similar to
           CG9434-PA - Monodelphis domestica
          Length = 412

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 807 GRAERGVXHTAPAWSERPTPN*DTYSVSYEXA--PRFPKGERRTVSR*AAGSEQGERTRE 634
           G A RG     P  +ERP P   T   S   A  PR P+G  R+  R A     GE  R 
Sbjct: 116 GLAPRGAEQPRPRGAERPRPR-GTNRPSPRGAGWPR-PRGAGRSSPRGANWPSPGEAERP 173

Query: 633 LPGGNAW 613
            PGG  W
Sbjct: 174 SPGGAEW 180


>UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amidase
           - Sagittula stellata E-37
          Length = 492

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +3

Query: 534 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALPVPTLPLTGILSAFLPSG 704
           G APL S  +   +V G   R DY D   F   A +C LP  +LP+ G  ++ LP G
Sbjct: 383 GLAPLPSEVEYPKEVAGRPCR-DYLDWLSFAFLATTCGLPALSLPV-GFTASGLPVG 437


>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
           Adineta vaga|Rep: Putative uncharacterized protein -
           Adineta vaga
          Length = 400

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = -2

Query: 623 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 444
           E  GIF    GF  + L +D C  + GG A  +T  +    G+W + G L  C+  + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303

Query: 443 DSVD 432
           D +D
Sbjct: 304 DHID 307


>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
           Methanocorpusculum labreanum Z|Rep: Putative
           uncharacterized protein - Methanocorpusculum labreanum
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 109

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = -3

Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
           +MNA V +  FIAA      +  +T +   AFF L S  G    ++VSY VW  L
Sbjct: 27  RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76


>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
           SCAF15018, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 754

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +3

Query: 417 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 596
           GG+ V   ++GI+ ERT  +    +P  +  PR W  S+   P   +     +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668

Query: 597 QDYKDT 614
               DT
Sbjct: 669 PSSNDT 674


>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
           arietinum|Rep: Reverse transcriptase - Cicer arietinum
           (Chickpea) (Garbanzo)
          Length = 37

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 423 NTVIHRIRGITQERTCE 473
           NTVIH  +GITQERTCE
Sbjct: 21  NTVIHXNQGITQERTCE 37


>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
           serovar O2|Rep: MobA protein - Listonella anguillarum
           serovar O2
          Length = 548

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 205 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 44
           NG+K  N +       +  L++ CG L +L+  +  + + LT+ +GR A   P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542


>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter baumannii ATCC 17978|Rep: Putative
           uncharacterized protein - Acinetobacter baumannii
           (strain ATCC 17978 / NCDC KC 755)
          Length = 183

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -3

Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 386
           ML   A+ + + ++ GL    G+ L  C H+++  + L     ++P L ++I +  A
Sbjct: 1   MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57


>UniRef50_Q2HGJ7 Cluster: Predicted protein; n=1; Chaetomium
           globosum|Rep: Predicted protein - Chaetomium globosum
           (Soil fungus)
          Length = 577

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 22/56 (39%), Positives = 28/56 (50%)
 Frame = +3

Query: 636 PSCALPVPTLPLTGILSAFLPSGSVAXSHSSRCRYLSSV*VVRSKLGLCAQPPVQP 803
           P+ A P+PT P+T    +  PSGS + S S        V    S LG C+ PPV P
Sbjct: 404 PAPARPLPTPPITQSSHSRYPSGSGSGSGSGPWT-RPPVWRTPSSLGSCSPPPVPP 458


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,402,939
Number of Sequences: 1657284
Number of extensions: 17157462
Number of successful extensions: 47286
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 44809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47230
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -