BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_P19 (879 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 122 9e-27 UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 1e-16 UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 85 3e-15 UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 77 8e-13 UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 72 2e-11 UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10 UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10 UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06 UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 56 2e-06 UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 55 3e-06 UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001 UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002 UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005 UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083 UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 39 0.15 UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.8 UniRef50_UPI0000F2C98A Cluster: PREDICTED: similar to CG9434-PA;... 34 4.1 UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amida... 34 5.5 UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5 UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5 UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.2 UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.2 UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.6 UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6 UniRef50_Q2HGJ7 Cluster: Predicted protein; n=1; Chaetomium glob... 33 9.6 >UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium Length = 127 Score = 122 bits (295), Expect = 9e-27 Identities = 56/79 (70%), Positives = 57/79 (72%) Frame = +1 Query: 625 PWKLPRALSLFRPCRLPGYCPPFSLREAWRXLIAHAVGISVRCRSFAPSWGCVXNPPFSP 804 P + P LFRPCRLP CPPFSLREAWR LIAHAVGISVRCRSFAPSW NPPFSP Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108 Query: 805 TAAPYPXNYRLXSTRVXPT 861 TAAPYP L TR T Sbjct: 109 TAAPYPVTIVLSPTRKDTT 127 Score = 96.3 bits (229), Expect = 9e-19 Identities = 47/56 (83%), Positives = 48/56 (85%) Frame = +3 Query: 483 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650 SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 57 >UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organisms|Rep: Predicted protein - Nematostella vectensis Length = 97 Score = 89.0 bits (211), Expect = 1e-16 Identities = 42/50 (84%), Positives = 44/50 (88%) Frame = +3 Query: 501 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650 V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCAL Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93 >UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli Length = 147 Score = 84.6 bits (200), Expect = 3e-15 Identities = 40/48 (83%), Positives = 41/48 (85%) Frame = +3 Query: 507 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 650 RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCAL Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125 Score = 52.8 bits (121), Expect = 1e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = +2 Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 412 R +C G +PLPRSLTR ARSFGCGERY+LT Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58 >UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 - Citrobacter koseri ATCC BAA-895 Length = 125 Score = 76.6 bits (180), Expect = 8e-13 Identities = 44/84 (52%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Frame = +1 Query: 604 IKIPGVSPWKLPRALSLFRPC--RLPGYCPPFSLREAWRXLIAHAVGISVRCRSFAPSWG 777 +KI VS LP ALS P R+P PPFSL + + GIS RCRSFAPSW Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIP--VPPFSLAGSVALSHSSHSGISARCRSFAPSWA 89 Query: 778 CVXNPPFSPTAAPYPXNYRLXSTR 849 NPPFSPTAAPYP L TR Sbjct: 90 VSKNPPFSPTAAPYPVTVHLSPTR 113 >UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 - Citrobacter koseri ATCC BAA-895 Length = 99 Score = 72.1 bits (169), Expect = 2e-11 Identities = 40/82 (48%), Positives = 48/82 (58%) Frame = -1 Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN*DTYSVSYEXAPRFPKGE 691 +A R PG + R RS RAERGV +PAWSERP P+ DT SVSYE APRFPKG+ Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60 Query: 690 RRTVSR*AAGSEQGERTRELPG 625 + + +G QG R G Sbjct: 61 K---AEQVSGKRQGRNRRAHEG 79 Score = 44.4 bits (100), Expect = 0.004 Identities = 29/94 (30%), Positives = 37/94 (39%) Frame = -3 Query: 856 VLPGWXQDDSXPDKAQRSG*TGGXAHSPSLERTTYTXXXXXXXXXXXXATLPEGRKADSI 677 V PGW QDDS G A+SP+ P+G+KA+ + Sbjct: 6 VRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65 Query: 676 PVSGRVGTGRAHEGASRGKRLVSL*SCRVSPPLT 575 + RAHEGA+ K SL PPLT Sbjct: 66 SGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99 >UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; root|Rep: Putative uncharacterized protein - Escherichia coli Length = 61 Score = 69.3 bits (162), Expect = 1e-10 Identities = 41/60 (68%), Positives = 42/60 (70%) Frame = -3 Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 377 MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56 >UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; Bacteroides capillosus ATCC 29799|Rep: Putative uncharacterized protein - Bacteroides capillosus ATCC 29799 Length = 37 Score = 68.5 bits (160), Expect = 2e-10 Identities = 32/34 (94%), Positives = 32/34 (94%) Frame = +3 Query: 651 PVPTLPLTGILSAFLPSGSVAXSHSSRCRYLSSV 752 PVPTLPLTG LSAFLPSGSVA SHSSRCRYLSSV Sbjct: 4 PVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37 >UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE - Myxococcus xanthus Length = 486 Score = 55.6 bits (128), Expect = 2e-06 Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 448 CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319 >UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4; Bacteria|Rep: Putative uncharacterized protein 1 - Escherichia coli Length = 42 Score = 55.6 bits (128), Expect = 2e-06 Identities = 26/42 (61%), Positives = 30/42 (71%) Frame = -1 Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN 745 +A+ R PG + RIRRSGRAERGV +PAWSERPTPN Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42 >UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2; cellular organisms|Rep: Putative uncharacterized protein 1 - Escherichia coli Length = 47 Score = 54.8 bits (126), Expect = 3e-06 Identities = 26/45 (57%), Positives = 31/45 (68%) Frame = -1 Query: 870 VAISRXYPGGXKTIVXRIRRSGRAERGVXHTAPAWSERPTPN*DT 736 +A R +PG + RIRRS RAERGV +PAWSERPTP+ DT Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45 >UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; Beggiatoa sp. SS|Rep: Putative uncharacterized protein - Beggiatoa sp. SS Length = 114 Score = 46.0 bits (104), Expect = 0.001 Identities = 25/70 (35%), Positives = 37/70 (52%) Frame = +3 Query: 450 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 629 I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103 Query: 630 EAPSCALPVP 659 ++PS +L P Sbjct: 104 QSPSYSLLFP 113 >UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40 (SV40) Length = 364 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = +2 Query: 92 DPDMIRYIDEFGQTTTRMQ 148 DPDMIRYIDEFGQTTTRMQ Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364 >UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger) Length = 49 Score = 44.0 bits (99), Expect = 0.005 Identities = 23/41 (56%), Positives = 27/41 (65%) Frame = +3 Query: 216 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 338 +++LT L RF V V +ALMNRPTRGERRFAYW Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41 >UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterobacteriaceae|Rep: Lactose operon repressor - Escherichia coli (strain K12) Length = 360 Score = 39.9 bits (89), Expect = 0.083 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = -1 Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289 +R + APNTQTASPRALADSLMQ Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348 >UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; cellular organisms|Rep: Uncharacterized 9.4 kDa protein - Escherichia coli Length = 84 Score = 39.1 bits (87), Expect = 0.15 Identities = 19/31 (61%), Positives = 21/31 (67%) Frame = +3 Query: 786 QPPVQPDRCALSG*LSS*XHPGXTDLSPLXA 878 +PPVQPDRCALSG +P DLSPL A Sbjct: 3 EPPVQPDRCALSGNYRLESNPVRHDLSPLAA 33 >UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1; Janthinobacterium sp. Marseille|Rep: Uncharacterized conserved protein - Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) Length = 212 Score = 35.5 bits (78), Expect = 1.8 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = -3 Query: 583 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 413 PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109 Query: 412 SELIPL 395 +L+ L Sbjct: 110 LQLLIL 115 >UniRef50_UPI0000F2C98A Cluster: PREDICTED: similar to CG9434-PA; n=1; Monodelphis domestica|Rep: PREDICTED: similar to CG9434-PA - Monodelphis domestica Length = 412 Score = 34.3 bits (75), Expect = 4.1 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = -1 Query: 807 GRAERGVXHTAPAWSERPTPN*DTYSVSYEXA--PRFPKGERRTVSR*AAGSEQGERTRE 634 G A RG P +ERP P T S A PR P+G R+ R A GE R Sbjct: 116 GLAPRGAEQPRPRGAERPRPR-GTNRPSPRGAGWPR-PRGAGRSSPRGANWPSPGEAERP 173 Query: 633 LPGGNAW 613 PGG W Sbjct: 174 SPGGAEW 180 >UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amidase - Sagittula stellata E-37 Length = 492 Score = 33.9 bits (74), Expect = 5.5 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 Query: 534 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALPVPTLPLTGILSAFLPSG 704 G APL S + +V G R DY D F A +C LP +LP+ G ++ LP G Sbjct: 383 GLAPLPSEVEYPKEVAGRPCR-DYLDWLSFAFLATTCGLPALSLPV-GFTASGLPVG 437 >UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; Adineta vaga|Rep: Putative uncharacterized protein - Adineta vaga Length = 400 Score = 33.9 bits (74), Expect = 5.5 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -2 Query: 623 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 444 E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303 Query: 443 DSVD 432 D +D Sbjct: 304 DHID 307 >UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; Methanocorpusculum labreanum Z|Rep: Putative uncharacterized protein - Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Length = 109 Score = 33.9 bits (74), Expect = 5.5 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = -3 Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86 +MNA V + FIAA + +T + AFF L S G ++VSY VW L Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76 >UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3 SCAF15018, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 754 Score = 33.5 bits (73), Expect = 7.2 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +3 Query: 417 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 596 GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668 Query: 597 QDYKDT 614 DT Sbjct: 669 PSSNDT 674 >UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer arietinum|Rep: Reverse transcriptase - Cicer arietinum (Chickpea) (Garbanzo) Length = 37 Score = 33.5 bits (73), Expect = 7.2 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +3 Query: 423 NTVIHRIRGITQERTCE 473 NTVIH +GITQERTCE Sbjct: 21 NTVIHXNQGITQERTCE 37 >UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum serovar O2|Rep: MobA protein - Listonella anguillarum serovar O2 Length = 548 Score = 33.1 bits (72), Expect = 9.6 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -3 Query: 205 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 44 NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++ Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542 >UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; Acinetobacter baumannii ATCC 17978|Rep: Putative uncharacterized protein - Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) Length = 183 Score = 33.1 bits (72), Expect = 9.6 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = -3 Query: 556 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 386 ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57 >UniRef50_Q2HGJ7 Cluster: Predicted protein; n=1; Chaetomium globosum|Rep: Predicted protein - Chaetomium globosum (Soil fungus) Length = 577 Score = 33.1 bits (72), Expect = 9.6 Identities = 22/56 (39%), Positives = 28/56 (50%) Frame = +3 Query: 636 PSCALPVPTLPLTGILSAFLPSGSVAXSHSSRCRYLSSV*VVRSKLGLCAQPPVQP 803 P+ A P+PT P+T + PSGS + S S V S LG C+ PPV P Sbjct: 404 PAPARPLPTPPITQSSHSRYPSGSGSGSGSGPWT-RPPVWRTPSSLGSCSPPPVPP 458 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 841,402,939 Number of Sequences: 1657284 Number of extensions: 17157462 Number of successful extensions: 47286 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 44809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 47230 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 78702453312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -