Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P19
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595...    30   2.1  
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548...    29   6.5  
12_01_0816 + 7502669-7503145                                           28   8.6  
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830...    28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>10_02_0157 -
           5954439-5954801,5956244-5956270,5956465-5956526,
           5956971-5957592
          Length = 357

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/85 (28%), Positives = 35/85 (41%)
 Frame = +1

Query: 613 PGVSPWKLPRALSLFRPCRLPGYCPPFSLREAWRXLIAHAVGISVRCRSFAPSWGCVXNP 792
           P V P +LP+  +L          PP   +EA + L    +     CRS   S   +   
Sbjct: 231 PAVLPQRLPQIFTL---------SPPTDAKEAAQPLPPCCMNDVAACRSPIASPSPMAGA 281

Query: 793 PFSPTAAPYPXNYRLXSTRVXPTYR 867
           P+  T A YP ++ L S R+    R
Sbjct: 282 PYQCTIATYPLSWSLISLRLSSVKR 306


>06_03_1508 -
           30653967-30654245,30654342-30654631,30654773-30654841,
           30654854-30654921,30655016-30655492,30655578-30655874,
           30655974-30656824,30656917-30656990,30657270-30657292,
           30657709-30657772,30658098-30658370,30658511-30658587,
           30658686-30658912
          Length = 1022

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 559 QKSTLKSEVAKPDRTIKIPGV-SPWKLPRALSLFRPCRLPGYCPPFSLRE 705
           Q   L+  V  P RT+   G  + +  P  L+   PC L  YCP  +L +
Sbjct: 158 QNINLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNK 207


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 816 RRSGRAERGVXHTAPAWSERPTPN*DTYSVSYEXAPRFPKGERR 685
           R SG  +R V    PAW ER   + ++ +V  E A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>11_04_0025 +
           12382485-12382823,12382835-12382894,12382960-12383073,
           12383187-12383837
          Length = 387

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = +3

Query: 609 DTRRFPLEAPSCALPVPTLPLTGILSAFLPSGSVAXSHSSRCRYLSSV*VVRSKLGLCAQ 788
           DTR+ P  +P    P P+ PL       L       +HS     L    VV+ KL   A 
Sbjct: 69  DTRKTPSASPKRTPPTPSAPLLKRKHLSLILFCNYFTHSRSFINLKKKTVVKKKLAAAAS 128

Query: 789 PPVQP 803
            P  P
Sbjct: 129 KPAPP 133


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 296 NESAN---ARGEAVCVLGALPLPRSLTRCAR 379
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,828,479
Number of Sequences: 37544
Number of extensions: 521279
Number of successful extensions: 1592
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)