Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P17
         (995 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       32   0.62 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    32   0.62 
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    31   1.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.5  
01_01_0715 - 5542648-5543219,5543352-5543544                           30   3.3  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    29   4.4  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   5.8  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = -1

Query: 308 GGGAPPNQXIFFXXGAXFPPPXXGXGGGGRXPYXKXEPTGPGG 180
           GGG PP+       G    PP  G GGGG  P       G GG
Sbjct: 113 GGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGG 155


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 17/43 (39%), Positives = 17/43 (39%)
 Frame = +1

Query: 181  PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPP 309
            PP P G     G  PPPP    GG    P        GG PPP
Sbjct: 1111 PPPPPGGIT--GVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPP 1151



 Score = 29.1 bits (62), Expect = 5.8
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = +1

Query: 160  GXXXSXXPPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPP 309
            G      PP P+G        P PP P   GG   P    +   GG P P
Sbjct: 1116 GGITGVPPPPPIGGLGGHQAPPAPPLPEGIGG--VPPPPPVGGLGGPPAP 1163



 Score = 29.1 bits (62), Expect = 5.8
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = +1

Query: 181  PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPP 309
            PP P       G  PPPP    GG    P      + GG PPP
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPP--PPAGFRGGTPPP 1176


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = +1

Query: 181 PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPP 309
           PPG  GS       PPPP     G N         + GG PPP
Sbjct: 309 PPGYQGSNQGYQGPPPPPPSAYQGNNPGYQGGGPGYQGGNPPP 351


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +1

Query: 181 PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPP 309
           PP P G       + PPP P   G +  P        GG PPP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380


>01_01_0715 - 5542648-5543219,5543352-5543544
          Length = 254

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 181 PPGPVGSXLXXGXRPPPPXPXXGGGNXAP 267
           P  PV +    G  PPPP P  GG   AP
Sbjct: 175 PSPPVPAPAPAGSPPPPPPPPAGGNFTAP 203


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +1

Query: 181 PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPPQXXNW 324
           PPG   S       PPP  P  GGG   P      +    PP +   W
Sbjct: 724 PPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPPGRRAVW 771


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 22/76 (28%), Positives = 23/76 (30%)
 Frame = +1

Query: 181 PPGPVGSXLXXGXRPPPPXPXXGGGNXAPXKKKIXWXGGAPPPQXXNWGEKKXXFFXXTX 360
           PP P  S    G  PPPP P       AP   +    G  PPP     G           
Sbjct: 335 PPAPSPSAAGAGSGPPPPPPP-----AAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPAL 389

Query: 361 XGGAXLXFXPPXXXXP 408
            GG      PP    P
Sbjct: 390 PGGPRARGPPPFKKSP 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,509,617
Number of Sequences: 37544
Number of extensions: 292210
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)