Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P14
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   1.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   7.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   7.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.7  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 102 PKRLELLGKYGTR-YGASLRKMVKKMEVTQHAKYTCSFCGK 221
           PKR + + KY  R +  S   ++ +   T    Y+C  CGK
Sbjct: 76  PKR-QFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 138 VCHICQVIPTFLV 100
           +CHIC++   FLV
Sbjct: 113 ICHICELHTIFLV 125


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  FSVNFCIGEVYQNGQTYQKGWN 117
           F+ N+   + Y N   YQ+G++
Sbjct: 211 FNFNYQYNQAYSNYNNYQEGFS 232


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  FSVNFCIGEVYQNGQTYQKGWN 117
           F+ N+   + Y N   YQ+G++
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGFS 252


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 44  FFFSLSTFVSERFTKMAKRTKKV 112
           F   LST ++ RFT++  RT+ +
Sbjct: 233 FVMLLSTALAYRFTQVTDRTQSM 255


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 44  FFFSLSTFVSERFTKMAKRTKKV 112
           F   LST ++ RFT++  RT+ +
Sbjct: 233 FVMLLSTALAYRFTQVTDRTQSM 255


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 44  FFFSLSTFVSERFTKMAKRTKKV 112
           F   LST ++ RFT++  RT+ +
Sbjct: 233 FVMLLSTALAYRFTQVTDRTQSM 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,632
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)