Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P12
         (983 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089504-1|AAL90242.1| 1012|Drosophila melanogaster GH13383p pro...    29   9.8  
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P...    29   9.8  

>AY089504-1|AAL90242.1| 1012|Drosophila melanogaster GH13383p
           protein.
          Length = 1012

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 815 PDXETDTP*GAERSPQPNDRAQRVSERGNGRAPNTQTASP-RXLADSLMQKK 663
           PD +   P  + RSP P+ R +R S R  G    +++ SP R  ++SL +++
Sbjct: 234 PDGKRRRPRSSSRSPSPSSRRRRRS-RSKGSRTRSRSKSPIRRRSNSLERRR 284


>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
           protein.
          Length = 1330

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 815 PDXETDTP*GAERSPQPNDRAQRVSERGNGRAPNTQTASP-RXLADSLMQKK 663
           PD +   P  + RSP P+ R +R S R  G    +++ SP R  ++SL +++
Sbjct: 234 PDGKRRRPRSSSRSPSPSSRRRRRS-RSKGSRTRSRSKSPIRRRSNSLERRR 284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,298,483
Number of Sequences: 53049
Number of extensions: 372069
Number of successful extensions: 764
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4955967126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)