Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P11
(1006 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 36 0.034
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.045
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.045
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.045
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.079
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.079
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.079
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.11
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.11
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 34 0.18
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 34 0.18
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.56
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 32 0.56
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.56
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.56
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 32 0.56
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.74
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 32 0.74
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 32 0.74
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 31 1.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.7
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 1.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.7
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.3
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 3.0
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 3.0
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 3.0
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 3.0
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 3.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.0
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.0
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 6.9
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 6.9
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 36.3 bits (80), Expect = 0.034
Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGX-GPXPPPA-PXQXKPXXP 543
PG+ PP H G G G P P P G GP PP + KP P
Sbjct: 163 PGSEGPPGPPGHDGPNG---GPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQP 219
Query: 542 XXPGGAAXXAXXPXA---GAXGAPSTXXXGGP 456
PG A A G GAP + GP
Sbjct: 220 GQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGP 251
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.045
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -3
Query: 704 PPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
PPP G + GP P P P GP PPP P P P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G PPP G P G P P P G P PPP P P P P
Sbjct: 725 GPPPPPP----PGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 533 GGAAXXAXXP 504
G P
Sbjct: 777 PGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.045
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -3
Query: 704 PPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
PPP G + GP P P P GP PPP P P P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G PPP G P G P P P G P PPP P P P P
Sbjct: 725 GPPPPPP----PGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 533 GGAAXXAXXP 504
G P
Sbjct: 777 PGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.045
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -3
Query: 704 PPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
PPP G + GP P P P GP PPP P P P P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G PPP G P G P P P G P PPP P P P P
Sbjct: 308 GPPPPPP----PGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 533 GGAAXXAXXP 504
G P
Sbjct: 360 PGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.079
Identities = 26/86 (30%), Positives = 30/86 (34%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G+ PPP G+ P R P T P P G P PP A P P P
Sbjct: 253 GSPPPPPAA---GSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRA---GSPPPPPPP 303
Query: 533 GGAAXXAXXPXAGAXGAPSTXXXGGP 456
G+ P A G+P G P
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTGSP 329
Score = 29.1 bits (62), Expect = 5.2
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Frame = -2
Query: 717 PRXXXAPXGXXPPRGXXPQXGXXXXXGTDXKAXXXPXXXPGXGAXPPTXPXAXQAPXXAX 538
P +P PPRG P +A P G G+ PP QAP +
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPP-----QAGGSPPPA-GTGSPPPPPRQKRQAPERSP 344
Query: 537 PRGGRXXRXP----XPRGGXGR 484
P G P PRGG G+
Sbjct: 345 PTGSPPTGSPPTGRPPRGGPGK 366
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/84 (27%), Positives = 27/84 (32%)
Frame = -1
Query: 667 APXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXX 488
AP G P PKG G P P + P R G P P
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPP 284
Query: 487 AXRAPXXPGAXXPPERXKXQTAPP 416
A +P P A PP + +PP
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.079
Identities = 26/86 (30%), Positives = 30/86 (34%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G+ PPP G+ P R P T P P G P PP A P P P
Sbjct: 274 GSPPPPPAA---GSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRA---GSPPPPPPP 324
Query: 533 GGAAXXAXXPXAGAXGAPSTXXXGGP 456
G+ P A G+P G P
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTGSP 350
Score = 29.1 bits (62), Expect = 5.2
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Frame = -2
Query: 717 PRXXXAPXGXXPPRGXXPQXGXXXXXGTDXKAXXXPXXXPGXGAXPPTXPXAXQAPXXAX 538
P +P PPRG P +A P G G+ PP QAP +
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPP-----QAGGSPPPA-GTGSPPPPPRQKRQAPERSP 365
Query: 537 PRGGRXXRXP----XPRGGXGR 484
P G P PRGG G+
Sbjct: 366 PTGSPPTGSPPTGRPPRGGPGK 387
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/84 (27%), Positives = 27/84 (32%)
Frame = -1
Query: 667 APXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXX 488
AP G P PKG G P P + P R G P P
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPP 305
Query: 487 AXRAPXXPGAXXPPERXKXQTAPP 416
A +P P A PP + +PP
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.079
Identities = 26/86 (30%), Positives = 30/86 (34%)
Frame = -3
Query: 713 GTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXP 534
G+ PPP G+ P R P T P P G P PP A P P P
Sbjct: 259 GSPPPPPAA---GSPPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRA---GSPPPPPPP 309
Query: 533 GGAAXXAXXPXAGAXGAPSTXXXGGP 456
G+ P A G+P G P
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTGSP 335
Score = 29.1 bits (62), Expect = 5.2
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Frame = -2
Query: 717 PRXXXAPXGXXPPRGXXPQXGXXXXXGTDXKAXXXPXXXPGXGAXPPTXPXAXQAPXXAX 538
P +P PPRG P +A P G G+ PP QAP +
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPP-----QAGGSPPPA-GTGSPPPPPRQKRQAPERSP 350
Query: 537 PRGGRXXRXP----XPRGGXGR 484
P G P PRGG G+
Sbjct: 351 PTGSPPTGSPPTGRPPRGGPGK 372
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/84 (27%), Positives = 27/84 (32%)
Frame = -1
Query: 667 APXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXX 488
AP G P PKG G P P + P R G P P
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPP 290
Query: 487 AXRAPXXPGAXXPPERXKXQTAPP 416
A +P P A PP + +PP
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPP 314
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.11
Identities = 27/104 (25%), Positives = 28/104 (26%)
Frame = -1
Query: 643 PGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXXAXRAPXXP 464
PG P+ G W P P P R P PG P P P P P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPP-PPGRTPGP-----PGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 463 GAXXPPERXKXQTAPPPXXRXTXXXRXPXXPXQPXXQXXPXEAH 332
P R PPP R P P P H
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 378
Score = 33.5 bits (73), Expect = 0.24
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = -3
Query: 716 PGTXPPPX-GXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAP--XQXKPXX 546
PG PPP G G G P P P G P PPP P P
Sbjct: 241 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 300
Query: 545 PXXPGGAAXXAXXPXAGAXGAPS 477
P PG P PS
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPS 323
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 2/83 (2%)
Frame = -1
Query: 586 PAPHXPXRXTS--PXXRXXPGGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAPPP 413
P P P T P PG P P P G P PG P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 412 XXRXTXXXRXPXXPXQPXXQXXP 344
R P P P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYP 344
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.11
Identities = 27/104 (25%), Positives = 28/104 (26%)
Frame = -1
Query: 643 PGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXXAXRAPXXP 464
PG P+ G W P P P R P PG P P P P P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPP-PPGRTPGP-----PGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 463 GAXXPPERXKXQTAPPPXXRXTXXXRXPXXPXQPXXQXXPXEAH 332
P R PPP R P P P H
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 388
Score = 33.5 bits (73), Expect = 0.24
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = -3
Query: 716 PGTXPPPX-GXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAP--XQXKPXX 546
PG PPP G G G P P P G P PPP P P
Sbjct: 251 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 310
Query: 545 PXXPGGAAXXAXXPXAGAXGAPS 477
P PG P PS
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPS 333
Score = 31.9 bits (69), Expect = 0.74
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 2/83 (2%)
Frame = -1
Query: 586 PAPHXPXRXTS--PXXRXXPGGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAPPP 413
P P P T P PG P P P G P PG P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 412 XXRXTXXXRXPXXPXQPXXQXXP 344
R P P P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYP 354
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Frame = -3
Query: 725 SXXPGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGX-GPXPPPAPX--QXK 555
S PG+ P G +G GP G P + RP G GP P + K
Sbjct: 155 SGLPGSAGPAGGNGRRGPPGPVGG---PGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYK 211
Query: 554 PXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGG 459
P P PG AG GAP G
Sbjct: 212 PGQPGRPGPQGPRGETGPAGNPGAPGNDGEAG 243
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Frame = -3
Query: 725 SXXPGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGX-GPXPPPAPX--QXK 555
S PG+ P G +G GP G P + RP G GP P + K
Sbjct: 149 SGLPGSAGPAGGNGRRGPPGPVGG---PGEQGPQGDAGRPGAAGRPGPAGPRGEPGTEYK 205
Query: 554 PXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGG 459
P P PG AG GAP G
Sbjct: 206 PGQPGRPGPQGPRGETGPAGNPGAPGNDGEAG 237
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.56
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--PXPPPAPXQXKPXXP 543
PG PP G+ G P + P P G P P P Q +P P
Sbjct: 156 PGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIP 215
Query: 542 XXPG--GAAXXAXXPXA----GAXGAPSTXXXGGP 456
PG G A P + GA G+P GP
Sbjct: 216 GEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGP 250
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 32.3 bits (70), Expect = 0.56
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGX-GPXPPPA-PXQXKPXXP 543
PG P G G P R P P G GP P Q +P P
Sbjct: 160 PGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTP 219
Query: 542 XXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
PG A G GAP GP
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGP 248
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = -1
Query: 586 PAPHXPXRXTSPXXRXXPG----GPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAP 419
PAP P R +P P P P P P + P P PP + + +
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISG 531
Query: 418 PPXXRXT 398
PP R T
Sbjct: 532 PPTVRLT 538
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.56
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--PXPPPAPXQXKPXXP 543
PG PP G+ G P + P P G P P P Q +P P
Sbjct: 156 PGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIP 215
Query: 542 XXPG--GAAXXAXXPXA----GAXGAPSTXXXGGP 456
PG G A P + GA G+P GP
Sbjct: 216 GEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGP 250
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 32.3 bits (70), Expect = 0.56
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGX-GPXPPPA-PXQXKPXXP 543
PG P G G P R P P G GP P Q +P P
Sbjct: 160 PGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTP 219
Query: 542 XXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
PG A G GAP GP
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGP 248
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
P PP G G P P G GP PP P P
Sbjct: 184 PSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPG-----PAGPPG 238
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P GA+ A AG G P GP
Sbjct: 239 PDGASPTAAPGAAGPPGPPGPAGAPGP 265
Score = 31.5 bits (68), Expect = 0.98
Identities = 31/122 (25%), Positives = 32/122 (26%), Gaps = 1/122 (0%)
Frame = -2
Query: 699 PXGXXPPRGXXPQXGXXXXXGTDXKAXXXPXXXPGXGAXPPTXPXAXQAPXXAXPRGGRX 520
P G P G G G+ P A P A P P G
Sbjct: 159 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAG--E 216
Query: 519 XRXPXPRGGXGRXEHXXXRGPXXPQSAEXXXXXXXPXPXXPXXX-GXPXPXNNPXTKXXP 343
P P G G GP P A P P G P P NP T P
Sbjct: 217 STYPEP-AGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 275
Query: 342 XK 337
K
Sbjct: 276 GK 277
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G GP P P A PPG G GA G GP
Sbjct: 209 GPDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGP 256
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.74
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = -3
Query: 701 PPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLG-XGPXPPP--APXQXKPXXPXXPG 531
PP + G GP P A + P RP G GP PP A P P PG
Sbjct: 142 PPGPAGNAGNPGPKGPPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPG 201
Query: 530 GAAXXAXXPXAGAXGAPSTXXXGGP 456
P G G P GP
Sbjct: 202 QVRTVPAPP--GNPGQPGEPGAQGP 224
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAP--XQXKPXXP 543
PG QG GP P R P P L G PP P +P P
Sbjct: 163 PGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRPGAP 222
Query: 542 XXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
PG A G G GP
Sbjct: 223 GQPGKAGSPGQDGSNGDAGVAGEPGQRGP 251
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = -1
Query: 676 GXXAPXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXR 497
G P G PG+ + PG P P + P R PG P P
Sbjct: 149 GPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDA 208
Query: 496 GXXAXRAPXXPGAXXPP 446
P PGA P
Sbjct: 209 PPGPSGPPGRPGAPGQP 225
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.98
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -1
Query: 676 GXXAPXGGXXXPGHXPKGXXXXXPGAWXXG-PAPHXPXRXT-SPXXRXXPGGPXXPXPXP 503
G P G PG P G A G P P P +P PG P P
Sbjct: 145 GPAGPDGAPGAPG--PDGQPGQDGPAGQPGAPGPAGPEGDAGAPGDAGAPGAPGAPGQDG 202
Query: 502 XRGXXAXRAPXXPGAXXP 449
RG AP PG P
Sbjct: 203 QRGTGLPGAPGAPGPQGP 220
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.98
Identities = 30/122 (24%), Positives = 31/122 (25%), Gaps = 1/122 (0%)
Frame = -2
Query: 699 PXGXXPPRGXXPQXGXXXXXGTDXKAXXXPXXXPGXGAXPPTXPXAXQAPXXAXPRGGRX 520
P G P G G G+ P A P A P P G
Sbjct: 158 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGEST 217
Query: 519 XRXPXPRGGXGRXEHXXXRGPXXPQSAEXXXXXXXPXPXXPXXX-GXPXPXNNPXTKXXP 343
P G G GP P A P P G P P NP T P
Sbjct: 218 YPEPAAPGPAGPP---GPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 274
Query: 342 XK 337
K
Sbjct: 275 GK 276
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G GP P AP A PPG G GA G GP
Sbjct: 208 GPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGP 255
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
P PP G G P P GP PP P P
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPA-----GPPG 237
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P GA+ A AG G P GP
Sbjct: 238 PDGASPTAAPGAAGPPGPPGPAGAPGP 264
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/79 (31%), Positives = 26/79 (32%)
Frame = +1
Query: 481 GAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGPXPRXXGRXXGRLXVXAXGXXXPL 660
G P APA G PPG G G G P G+ GR G P
Sbjct: 157 GNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQ-RGRGLPGPSGAPGPQ 215
Query: 661 LGPXAPWWXXPXGGGXVPG 717
P AP G G PG
Sbjct: 216 GPPGAP---GQPGSGNAPG 231
Score = 28.3 bits (60), Expect = 9.1
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Frame = -1
Query: 679 KGXXAPXGGXXXPG-HXPKGXXXXXPGAWXXGP-APHXPXRXT-SPXXRXXPGGPXXPXP 509
+G P G PG P G GP P P SP PG P P
Sbjct: 138 QGLPGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGK 197
Query: 508 XPXRGXXAXRAPXXPGAXXPP 446
RG PG PP
Sbjct: 198 SGQRGRGLPGPSGAPGPQGPP 218
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/70 (24%), Positives = 19/70 (27%)
Frame = -1
Query: 553 PXXRXXPGGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAPPPXXRXTXXXRXPXX 374
P P GP P P P PG P + P P R P
Sbjct: 200 PSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPG 259
Query: 373 PXQPXXQXXP 344
P P + P
Sbjct: 260 PPGPPTRRPP 269
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/107 (22%), Positives = 26/107 (24%)
Frame = -1
Query: 664 PXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPXRGXXA 485
P G P P+ GP P P P G P P +
Sbjct: 149 PSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGP---VDPSEDPQPSGSSSPGPVDPSDEPS 205
Query: 484 XRAPXXPGAXXPPERXKXQTAPPPXXRXTXXXRXPXXPXQPXXQXXP 344
P PG P E K P P P P P P
Sbjct: 206 PSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGP 252
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 64 DKXT*SHXXKKKKKXXKK*KXKK*KKXKKXKKKXXXXKKKXXK 192
D T S + + KK K KK KK KK KKK KKK K
Sbjct: 276 DSSTSSESEESDFEQKKKKKVKKSKKSKKDKKKEKKEKKKSKK 318
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Frame = -3
Query: 716 PGTXPPPXGXXHQ-GAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--------PXPPPAPX 564
PG P P G G GP P + P P G P P P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
Query: 563 QXKPXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
+ P PG A AG GAP T GGP
Sbjct: 211 ASEQGGPGEPGPAGPPGPAGPAGNDGAPGT---GGP 243
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGL-XCXGAGGGXG 588
G GPP G P +PA A PPG G G GA GG G
Sbjct: 162 GPPGPPGPD--GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G G P G P P A P G G G G G GP
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Frame = -3
Query: 716 PGTXPPPXGXXHQ-GAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--------PXPPPAPX 564
PG P P G G GP P + P P G P P P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
Query: 563 QXKPXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
+ P PG A AG GAP T GGP
Sbjct: 211 ASEQGGPGEPGPAGPPGPAGPAGNDGAPGT---GGP 243
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGL-XCXGAGGGXG 588
G GPP G P +PA A PPG G G GA GG G
Sbjct: 162 GPPGPPGPD--GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G G P G P P A P G G G G G GP
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = -1
Query: 700 PXXGXXTKGXXAPXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPX 521
P KG P GG PG G PG P P P P PG P
Sbjct: 164 PSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGR----PGPAGP--RGEPGTEYKPGQPG 217
Query: 520 XPXPXPXRGXXAXRA-PXXPG 461
P P RG P PG
Sbjct: 218 RPGPPGPRGEAGPAGQPGSPG 238
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Frame = -3
Query: 716 PGTXPPPXGXXHQ-GAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--------PXPPPAPX 564
PG P P G G GP P + P P G P P P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
Query: 563 QXKPXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
+ P PG A AG GAP T GGP
Sbjct: 211 ASEQGGPGEPGPAGPPGPAGPAGNDGAPGT---GGP 243
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGL-XCXGAGGGXG 588
G GPP G P +PA A PPG G G GA GG G
Sbjct: 162 GPPGPPGPD--GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G G P G P P A P G G G G G GP
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Frame = -3
Query: 716 PGTXPPPXGXXHQ-GAXGPXRGXXXPXAXTXRRPXXRPXXLGXG--------PXPPPAPX 564
PG P P G G GP P + P P G P P P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPG 210
Query: 563 QXKPXXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
+ P PG A AG GAP T GGP
Sbjct: 211 ASEQGGPGEPGPAGPPGPAGPAGNDGAPGT---GGP 243
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGL-XCXGAGGGXG 588
G GPP G P +PA A PPG G G GA GG G
Sbjct: 162 GPPGPPGPD--GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGP 591
G G P G P P A P G G G G G GP
Sbjct: 204 GGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/91 (30%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Frame = +1
Query: 478 LGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGG---XGP--------XPRXXGRXXGR 624
+GAP AP A PG G G A GG GP P G G
Sbjct: 217 VGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGG 276
Query: 625 LXVXAXGXXXPLLGPXAPWWXXPXGGGXVPG 717
V G P P AP P G PG
Sbjct: 277 YGVGPPGPPGPSGRPGAPGQPGPDGQPGAPG 307
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG PP GA G P T P P G P PP P Q
Sbjct: 216 PGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGG-PGPAGP-PGPPGPPGQDGSGGAAQ 273
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGGP 456
PG G G P GGP
Sbjct: 274 PGPPGPPGPPGNDGQPGGPG--QPGGP 298
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 448 GXXGPPXXXVLGAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGPXPRXXGRXXG 621
G G P + +P P PPG G G G G GP P G+ G
Sbjct: 235 GQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGP-PGNDGQPGG 291
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = -1
Query: 679 KGXXAPXGGXXXPG-HXPKGXXXXXPGAWXXGP-APHXPXRXT-SPXXRXXPGGPXXPXP 509
+G P G PG P G GP P P SP PG P P
Sbjct: 138 QGLPGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGK 197
Query: 508 XPXRGXXAXRAPXXPGAXXPP 446
RG PG+ PP
Sbjct: 198 SGQRGRGLPGPSGAPGSQGPP 218
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -3
Query: 590 GPXPPPAPXQXKPXXPXXPGGAAXXAXXPXAG---AXGAPSTXXXGGP 456
GP PP P Q P PG A P AG GAP G P
Sbjct: 716 GPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAP 763
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.3
Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Frame = -3
Query: 704 PPPXGXXHQGAXGPXRG--XXXPXAXTXRRPXXR----PXXLGXGPXPPP---APXQXKP 552
PPP G QG P +G P + P + P G PPP AP P
Sbjct: 321 PPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAP 380
Query: 551 XXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P G A P A GAP GGP
Sbjct: 381 PPQSGPPG----AFAPPPSAFGAPQ--GPGGP 406
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 535 PGGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAPPP 413
PGGP P P G P PG+ PP+ PPP
Sbjct: 403 PGGPGGYGPPPPGG------PGAPGSYGPPQGGPGGFGPPP 437
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG PP G+ G P P P P AP Q
Sbjct: 208 PGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQ 267
Query: 536 PGGAAXXAXXPXAGAXGAP 480
PGG GA GAP
Sbjct: 268 PGGPGPQGDAGAPGAPGAP 286
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG PP G+ G P P P P AP Q
Sbjct: 208 PGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQ 267
Query: 536 PGGAAXXAXXPXAGAXGAP 480
PGG GA GAP
Sbjct: 268 PGGPGPQGDAGAPGAPGAP 286
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG P G G P A + P P P P P Q P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
PG G GAP G
Sbjct: 215 PGAPGPAGPAGPQGPPGAPGQPGHDG 240
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG P G G P A + P P P P P Q P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
PG G GAP G
Sbjct: 215 PGAPGPAGPAGPQGPPGAPGQPGHDG 240
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG PP G+ G P P P P AP Q
Sbjct: 208 PGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQ 267
Query: 536 PGGAAXXAXXPXAGAXGAP 480
PGG GA GAP
Sbjct: 268 PGGPGPQGDAGAPGAPGAP 286
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG PP G+ G P P P P AP Q
Sbjct: 208 PGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQ 267
Query: 536 PGGAAXXAXXPXAGAXGAP 480
PGG GA GAP
Sbjct: 268 PGGPGPQGDAGAPGAPGAP 286
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG P G G P A + P P P P P Q P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
PG G GAP G
Sbjct: 215 PGAPGPAGPAGPQGPPGAPGQPGHDG 240
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG P G G P A + P P P P P Q P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
PG G GAP G
Sbjct: 215 PGAPGPAGPAGPQGPPGAPGQPGHDG 240
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 5/92 (5%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPA-----PXQXKP 552
PG PP G G A P P G P PA P +P
Sbjct: 155 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 214
Query: 551 XXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P PG G GAP GP
Sbjct: 215 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGP 246
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXX-LGXGPXPPPAPX--QXKPXX 546
P T PPP G GP P P P G GP PP P
Sbjct: 156 PST-PPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQ 214
Query: 545 PXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P PGG AG P GP
Sbjct: 215 PGQPGGPGQDG-ASSAGGEAGPGPAGPPGP 243
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 5/92 (5%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPA-----PXQXKP 552
PG PP G G A P P G P PA P +P
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 551 XXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P PG G GAP GP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGP 241
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 5/92 (5%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPA-----PXQXKP 552
PG PP G G A P P G P PA P +P
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 209
Query: 551 XXPXXPGGAAXXAXXPXAGAXGAPSTXXXGGP 456
P PG G GAP GP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGP 241
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG P G G P A + P P P P P Q P P
Sbjct: 156 PGPAGPAGDAGANGNPGAPGQDGQPGAPGNKGPSG-PNGNPGAPGAPGQPGQDAPSEPIT 214
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
PG G GAP G
Sbjct: 215 PGAPGPAGPAGPQGQPGAPGQPGHDG 240
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 5.2
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -1
Query: 586 PAPHXPXRX--TSPXXRXXPGGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTAPPP 413
P P P R T P P P P P R R P P PP R PPP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQR--RPPRTPPSPEPRNPP-RTPPSPIPPP 194
Query: 412 XXRXTXXXRXPXXPXQP 362
R R +P
Sbjct: 195 PPRLNSHDRRALRARRP 211
Score = 28.7 bits (61), Expect = 6.9
Identities = 24/86 (27%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Frame = -1
Query: 586 PAPHXPXRXTSPXXRXXP-----GGPXXPXPXPXRGXXAXRAPXXPGAXXPPERXKXQTA 422
PAP SP P GG P P P R P P PP R T
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPP------PRVPRTPPPRSPPPRRPPMTP 164
Query: 421 PPPXXRXTXXXRXPXXPXQPXXQXXP 344
P P R P P P
Sbjct: 165 PSPQRRPPRTPPSPEPRNPPRTPPSP 190
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 5.2
Identities = 21/85 (24%), Positives = 23/85 (27%)
Frame = -2
Query: 591 GAXPPTXPXAXQAPXXAXPRGGRXXRXPXPRGGXGRXEHXXXRGPXXPQSAEXXXXXXXP 412
G P P P P G P P G G + GP P +
Sbjct: 1127 GPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSD-PNKPGPNGPNESSDPNKPGPN 1185
Query: 411 XPXXPXXXGXPXPXNNPXTKXXPXK 337
P P P P N P P K
Sbjct: 1186 GPNEPSDPNKPGP-NGPNGPSDPNK 1209
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/85 (24%), Positives = 22/85 (25%)
Frame = -2
Query: 591 GAXPPTXPXAXQAPXXAXPRGGRXXRXPXPRGGXGRXEHXXXRGPXXPQSAEXXXXXXXP 412
G P P P P G P P G G + GP P
Sbjct: 1267 GPNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSD-PNKPGPNGPNEPSDPNKPGPN 1325
Query: 411 XPXXPXXXGXPXPXNNPXTKXXPXK 337
P P P P N P P K
Sbjct: 1326 GPNGPSDPNKPGP-NGPNGPSDPNK 1349
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = -3
Query: 677 GAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXXPGGAAXXAXXPXA 498
GA G P A P G GP P P KP PG
Sbjct: 110 GAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSD 169
Query: 497 GAXGAPSTXXXGGP 456
G G P+T P
Sbjct: 170 GQPGRPATGGGAAP 183
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG G G GP P +P P AP Q P P
Sbjct: 173 PGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPG 232
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
P G+ P G GAP G
Sbjct: 233 PAGSPGAPGGP--GQAGAPGPKGPSG 256
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG G G GP P +P P AP Q P P
Sbjct: 173 PGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPG 232
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
P G+ P G GAP G
Sbjct: 233 PAGSPGAPGGP--GQAGAPGPKGPSG 256
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG G G GP P +P P AP Q P P
Sbjct: 173 PGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPG 232
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGG 459
P G+ P G GAP G
Sbjct: 233 PAGSPGAPGGP--GQAGAPGPKGPSG 256
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.9
Identities = 24/86 (27%), Positives = 27/86 (31%), Gaps = 7/86 (8%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAP-------XQX 558
PG PP G + G G P A T P + GP PP P
Sbjct: 204 PGPPGPPGGPGNDGQPGGPGNPGAPGAVT-EVPGQQGPPGPPGPAGPPGPAGNAGQAGYA 262
Query: 557 KPXXPXXPGGAAXXAXXPXAGAXGAP 480
+P PG A G GAP
Sbjct: 263 QPGPAGPPGDAGPDGAPGNPGQPGAP 288
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.9
Identities = 24/79 (30%), Positives = 25/79 (31%)
Frame = +1
Query: 481 GAPXAPAXGXXAXXAAPPGXXGXXGLXCXGAGGGXGPXPRXXGRXXGRLXVXAXGXXXPL 660
G P APA G PPG G G G P G+ R G P
Sbjct: 155 GNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQ-RSRGLPGPSGRPGPQ 213
Query: 661 LGPXAPWWXXPXGGGXVPG 717
P AP G G PG
Sbjct: 214 GPPGAP---GQPGSGSTPG 229
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 28.7 bits (61), Expect = 6.9
Identities = 23/89 (25%), Positives = 26/89 (29%)
Frame = -1
Query: 679 KGXXAPXGGXXXPGHXPKGXXXXXPGAWXXGPAPHXPXRXTSPXXRXXPGGPXXPXPXPX 500
KG P G PG+ + G G AP P P GP P
Sbjct: 218 KGNAGPAGPPGPPGYPGRPGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPGPPGPRGKDG 277
Query: 499 RGXXAXRAPXXPGAXXPPERXKXQTAPPP 413
G AP G P + AP P
Sbjct: 278 AGGEKG-APGDQGNPGPYGKPGQPGAPGP 305
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXP-PPAPXQXKPXXPX 540
PG P GA G G P + P G P P P
Sbjct: 161 PGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADAQSESIPG 220
Query: 539 XPGGAAXXAXXPXAGAXGAP 480
PG A AG+ GAP
Sbjct: 221 APGQAGPQGPPGPAGSPGAP 240
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 9.1
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = -3
Query: 716 PGTXPPPXGXXHQGAXGPXRGXXXPXAXTXRRPXXRPXXLGXGPXPPPAPXQXKPXXPXX 537
PG+ P QG P P A P P G P P P P
Sbjct: 249 PGSYPSGPADIPQGPGMPRA--FPPGASAPVAPGM-PGAFPPGQGGPGMPGSFPPGAPGP 305
Query: 536 PGGAAXXAXXPXAGAXGAPSTXXXGGP 456
G + P A G P GGP
Sbjct: 306 GGPGMPGSFAPGAPGPGGPGGYPSGGP 332
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 91 KKKKKXXK-K*KXKK*KKXKKXKKKXXXXKK 180
KKKKK K K K KK KK KK KK+ +K
Sbjct: 762 KKKKKDKKEKEKKKKSKKSKKSKKEKKTKRK 792
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,146,734
Number of Sequences: 27780
Number of extensions: 139955
Number of successful extensions: 1421
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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