Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P09
         (950 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   5.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   7.1  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   7.1  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   7.1  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   7.1  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 390 NVLNSLCNFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 256
           NV   +C+ + ++F  +  ++GI QN        +I ++   G F
Sbjct: 48  NVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMF 92


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 680 SSRSNNISDGFNNYYKWY*N 621
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 680 SSRSNNISDGFNNYYKWY*N 621
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 680 SSRSNNISDGFNNYYKWY*N 621
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 614 TLYFNTIYSNY*NHQKYYS 670
           T++ N  Y+NY N + YY+
Sbjct: 311 TIHNNNNYNNYNNKKLYYN 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,444
Number of Sequences: 438
Number of extensions: 2986
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)