Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P06
         (860 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep...    41   0.035
UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2; ...    38   0.33 
UniRef50_Q3EDB7 Cluster: Uncharacterized protein At1g15830.1; n=...    35   3.0  
UniRef50_Q2F5K7 Cluster: Receptor expression enhancing protein i...    34   5.3  
UniRef50_Q9UA70 Cluster: Unconventional myosin heavy chain MyoK;...    33   9.3  

>UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep:
           SJCHGC03128 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 145

 Score = 41.1 bits (92), Expect = 0.035
 Identities = 24/67 (35%), Positives = 25/67 (37%)
 Frame = +3

Query: 447 GGXPXRXGGXKXFXXXGGPPPXXXKXGPXVXXXXXFXXFKKKKKGGXXKXLAPXXXPPGG 626
           GG     GG K     G PPP     GP           KKK +GG          PPGG
Sbjct: 76  GGANPPPGGGKKGKNGGKPPPPKGGGGPPGGGGGLSFFKKKKGRGGGGAQKKKRGPPPGG 135

Query: 627 GXPPXKK 647
             PP KK
Sbjct: 136 KTPPKKK 142


>UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium|Rep: Putative uncharacterized protein -
           Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
          Length = 377

 Score = 37.9 bits (84), Expect = 0.33
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 508 GGGPPFXKXXFXPPXLXGXPPXXXXEKFPPXXKXGXPPP 392
           GG PP     F PP   G PP      +PP  + G PPP
Sbjct: 35  GGYPPAQPGGFGPPPQGGYPPPPPPGGYPPPPQGGFPPP 73


>UniRef50_Q3EDB7 Cluster: Uncharacterized protein At1g15830.1; n=1;
           Arabidopsis thaliana|Rep: Uncharacterized protein
           At1g15830.1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 483

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
 Frame = +3

Query: 354 SPXKVKKKXGXXXGGGXPXFXXGGNFSXLXXGGXPXRXGGXKXFXXXGGPPPXXXKXGPX 533
           +P  ++   G     G P    GG    +  G  P + GG       G PPP     G  
Sbjct: 122 APPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEP 181

Query: 534 VXXXXXFXXFKKKKKGGXXKXLAPXXXPP--GGGXPP 638
           V            K+GG  + + P   PP  GGG  P
Sbjct: 182 V-----IPGAPPPKRGGGGEPVIPGAPPPKRGGGGEP 213


>UniRef50_Q2F5K7 Cluster: Receptor expression enhancing protein
           isoform 1; n=5; Endopterygota|Rep: Receptor expression
           enhancing protein isoform 1 - Bombyx mori (Silk moth)
          Length = 175

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +3

Query: 168 NKSKPWTKYFELAE 209
           +KSKPWTKYFELAE
Sbjct: 18  DKSKPWTKYFELAE 31


>UniRef50_Q9UA70 Cluster: Unconventional myosin heavy chain MyoK;
           n=4; Dictyostelium discoideum|Rep: Unconventional myosin
           heavy chain MyoK - Dictyostelium discoideum (Slime mold)
          Length = 858

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
 Frame = +3

Query: 447 GGXPXRXGGXKXFXXXGGPPPXXXKXGPXVXXXXXFXXFKKKKKGGXXKXLA--PXXXPP 620
           GG P R GG       GGPPP   + GP                GG    +A  P   PP
Sbjct: 168 GGLPTRGGGPPS--RGGGPPPTRGRGGPPPPIPQNRGAPPPVSNGGAPPPVARGPVAPPP 225

Query: 621 GGGXPPXK 644
             G PP +
Sbjct: 226 TRGAPPTR 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,140,302
Number of Sequences: 1657284
Number of extensions: 6898449
Number of successful extensions: 9997
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8507
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)