Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P06
         (860 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08766-1|CAA70019.1|  638|Homo sapiens SF1-Bo isoform protein.         30   9.4  
Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        30   9.4  
L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1...    30   9.4  
D26120-2|BAA05117.1|  623|Homo sapiens ZFM1 protein protein.           30   9.4  
D26120-1|BAA05116.1|  548|Homo sapiens ZFM1 protein alternativel...    30   9.4  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          30   9.4  
BC020217-1|AAH20217.1|  548|Homo sapiens splicing factor 1 protein.    30   9.4  
BC008724-1|AAH08724.1|  548|Homo sapiens splicing factor 1 protein.    30   9.4  
BC008080-1|AAH08080.1|  548|Homo sapiens splicing factor 1 protein.    30   9.4  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    30   9.4  

>Y08766-1|CAA70019.1|  638|Homo sapiens SF1-Bo isoform protein.
          Length = 638

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1
           protein.
          Length = 639

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>D26120-2|BAA05117.1|  623|Homo sapiens ZFM1 protein protein.
          Length = 623

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>D26120-1|BAA05116.1|  548|Homo sapiens ZFM1 protein alternatively
           spliced product protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 608 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 637


>BC020217-1|AAH20217.1|  548|Homo sapiens splicing factor 1 protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>BC008724-1|AAH08724.1|  548|Homo sapiens splicing factor 1 protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>BC008080-1|AAH08080.1|  548|Homo sapiens splicing factor 1 protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 483 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 512


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 470 PPPXGXPPXX*XGKIPPXXKTGXXPPXXXP 381
           PPP G PP    G +PP  +    PP   P
Sbjct: 109 PPPSGQPPPPPSGPLPPWQQQQQQPPPPPP 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,728,878
Number of Sequences: 237096
Number of extensions: 1535966
Number of successful extensions: 2248
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2165
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)