Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P05
(895 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30159| Best HMM Match : zf-C3HC (HMM E-Value=3) 31 1.7
SB_10214| Best HMM Match : VWA (HMM E-Value=1.30321e-43) 31 1.7
SB_44176| Best HMM Match : PAP_assoc (HMM E-Value=0.56) 30 2.2
SB_33256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_57133| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_44636| Best HMM Match : IncA (HMM E-Value=0.32) 29 3.8
SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025) 29 3.8
SB_3949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_2520| Best HMM Match : Fer2 (HMM E-Value=5.2) 29 3.8
SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_29875| Best HMM Match : PHD (HMM E-Value=0.0014) 29 5.1
SB_27385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_53096| Best HMM Match : PHD (HMM E-Value=0.001) 29 5.1
SB_49455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8) 29 5.1
SB_10908| Best HMM Match : Cytochrom_B562 (HMM E-Value=3.4) 29 5.1
SB_49789| Best HMM Match : IncA (HMM E-Value=0.47) 29 6.7
SB_17725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_23275| Best HMM Match : IncA (HMM E-Value=0.43) 29 6.7
SB_11599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_818| Best HMM Match : Gelsolin (HMM E-Value=6.4) 29 6.7
SB_56144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_55205| Best HMM Match : DUF1270 (HMM E-Value=3.7) 28 8.9
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_30159| Best HMM Match : zf-C3HC (HMM E-Value=3)
Length = 440
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N DL KT++ F +W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGDLVKTLYHFPGDSWK 57
>SB_10214| Best HMM Match : VWA (HMM E-Value=1.30321e-43)
Length = 821
Score = 30.7 bits (66), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 291 CASQPGRCSPGPRSSDP 241
CA +PG+C PGP DP
Sbjct: 749 CAEKPGQCPPGPVGGDP 765
>SB_44176| Best HMM Match : PAP_assoc (HMM E-Value=0.56)
Length = 579
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 562 LCFQSLTC-QYLSPSTILSSTSRIIFIMMSRILILYFPVPSMGSISSWPPNVYSP 401
L Q LT LSP T++ T++ + I+ IL F G I PPN Y+P
Sbjct: 161 LAAQKLTILDALSP-TLIPHTTKYVPILNKHILSKVFDQVIQGQIIPTPPNTYTP 214
>SB_33256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.5 bits (63), Expect = 3.8
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +3
Query: 357 YDKTLLDLKCSVTLV----GEYT-LGGQLLILPIEGTGKYXXXXXXXXXXXXLDVEERIV 521
Y + LL KC LV G++ LGG + L E TGKY + +
Sbjct: 298 YIRPLLKPKCEYVLVTRNGGQHNKLGGLMSKLVFEATGKYVHPTRYRQIAETSSCKV-LK 356
Query: 522 EGDRYWHVSDWKHSAEDVSKVEYQFQ 599
DR D KHS+ +V+KV Y+ Q
Sbjct: 357 SADRSAISEDQKHSS-NVAKVHYRKQ 381
>SB_57133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADEHGNVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 57
>SB_44636| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 554
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 179 RYPYYSRFRFSADEHGNVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 227
>SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025)
Length = 1480
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFNFNGDEYDPFDKNGNLVKTLYRFPGNSWK 57
>SB_3949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFNFNGDEYDPFDKNGNLVKTLYRFLGNSWK 57
>SB_2520| Best HMM Match : Fer2 (HMM E-Value=5.2)
Length = 453
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 176 RYPYYSRFRFSADEHGNVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 224
>SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1402
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 668 NLSGXWLLPWXKAIVSKIIHETFKLFD 748
N+SG W LPW + + ++I + +L++
Sbjct: 397 NISGRWNLPWITSSIKRLIRKKQRLYN 423
>SB_29875| Best HMM Match : PHD (HMM E-Value=0.0014)
Length = 598
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 668 NLSGXWLLPWXKAIVSKIIHETFKLFD 748
N+SG W LPW + + ++I + +L++
Sbjct: 415 NISGRWNLPWITSSIKRLIRKKQRLYN 441
>SB_27385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 179 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 227
>SB_53096| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 623
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 668 NLSGXWLLPWXKAIVSKIIHETFKLFD 748
N+SG W LPW + + ++I + +L++
Sbjct: 335 NISGRWNLPWITSSIKRLIRKKQRLYN 361
>SB_49455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 668 NLSGXWLLPWXKAIVSKIIHETFKLFD 748
N+SG W LPW + + ++I + +L++
Sbjct: 729 NISGRWNLPWITSSIKRLIRKKQRLYN 755
>SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8)
Length = 412
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 668 NLSGXWLLPWXKAIVSKIIHETFKLFD 748
N+SG W LPW + + ++I + +L++
Sbjct: 302 NISGRWNLPWITSSIKRLIRKKQRLYN 328
>SB_10908| Best HMM Match : Cytochrom_B562 (HMM E-Value=3.4)
Length = 389
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 78 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 126
>SB_49789| Best HMM Match : IncA (HMM E-Value=0.47)
Length = 674
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F +W+
Sbjct: 179 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGDSWK 227
>SB_17725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F +W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGDSWK 57
>SB_23275| Best HMM Match : IncA (HMM E-Value=0.43)
Length = 1176
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F +W+
Sbjct: 681 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGDSWK 729
>SB_11599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F +W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFVFNGDEYDPFDKNGNLVKTLYHFPGDSWK 57
>SB_818| Best HMM Match : Gelsolin (HMM E-Value=6.4)
Length = 119
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA + V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSANEHGNVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 57
>SB_56144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA+ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADGHGNVQFVFNGDEYDPFDKNGNLVKTLYHFPGNSWK 57
>SB_55205| Best HMM Match : DUF1270 (HMM E-Value=3.7)
Length = 600
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFIFNGDEYDPFDKNGNLVKTLYRFPGNSWK 57
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +3
Query: 531 RYWHVSDWKHSAEDVSKVEYQFQ----NLFNGNRDLAKTIHDFANSNWR 665
RY + S ++ SA++ V++ F + F+ N +L KT++ F ++W+
Sbjct: 9 RYPYYSRFRFSADEHGDVQFIFNGDEYDPFDKNGNLVKTLYRFPGNSWK 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,582,544
Number of Sequences: 59808
Number of extensions: 535447
Number of successful extensions: 1486
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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