Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P04
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 167 4e-40
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 124 3e-27
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 124 3e-27
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 117 4e-25
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 103 8e-21
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 103 8e-21
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 99 2e-19
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 94 4e-18
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 92 2e-17
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 90 8e-17
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 88 3e-16
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 84 4e-15
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 84 5e-15
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 78 3e-13
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 69 1e-10
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 65 2e-09
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 58 2e-07
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 55 2e-06
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 54 5e-06
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 50 6e-05
UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 fami... 49 1e-04
UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1; G... 46 0.001
UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog... 43 0.009
UniRef50_A1RXI2 Cluster: Translation initiation factor SUI1; n=1... 39 0.15
UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lambli... 38 0.35
UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, who... 37 0.61
UniRef50_Q00YW3 Cluster: Density-regulated protein related to tr... 37 0.80
UniRef50_Q03SW1 Cluster: Predicted membrane protein; n=1; Lactob... 35 2.4
UniRef50_A7Q7W8 Cluster: Chromosome chr18 scaffold_61, whole gen... 35 3.2
UniRef50_Q9YBG9 Cluster: Protein translation factor SUI1 homolog... 34 5.7
UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|... 33 7.5
UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=... 33 7.5
UniRef50_Q5UZP9 Cluster: Protein translation factor SUI1 homolog... 33 7.5
UniRef50_O04659 Cluster: A_TM021B04.2 protein; n=2; Eukaryota|Re... 33 9.9
UniRef50_Q5CQN1 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 167 bits (405), Expect = 4e-40
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = +2
Query: 212 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 391
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60
Query: 392 KKEFACNGTVVEHPEYGEVLQLQG 463
KKEFACNGTV+EHPEYGEVLQLQG
Sbjct: 61 KKEFACNGTVIEHPEYGEVLQLQG 84
Score = 56.4 bits (130), Expect = 9e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQRENICQWLTK GL KP+QLKVHGF
Sbjct: 85 DQRENICQWLTKVGLAKPDQLKVHGF 110
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 124 bits (299), Expect = 3e-27
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 124 bits (299), Expect = 3e-27
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 117 bits (282), Expect = 4e-25
Identities = 56/99 (56%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +2
Query: 173 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQ 346
+VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQ
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQ 224
Query: 347 GLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
G++ +YD KK+V+A K FACNGTV+EHPEYGEV+Q QG
Sbjct: 225 GIADDYDKKKLVKAF-KNFACNGTVIEHPEYGEVIQPQG 262
Score = 36.7 bits (81), Expect = 0.80
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQ NICQ+L + GL K +QLKVH F
Sbjct: 263 DQCNNICQFLVELGLAKDDQLKVHVF 288
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 103 bits (246), Expect = 8e-21
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Frame = +2
Query: 212 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 385
MSI+NL T+DPFA+A + S + +H+RIQQRNGRKTLTTVQG+ ++D KKI++
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGIPKKFDAKKILK 60
Query: 386 ACKKEFACNGTVV--EHPEYGEVLQLQG 463
KKEFACNGT++ E + G+V+QLQG
Sbjct: 61 VVKKEFACNGTIIGDEDSKMGDVIQLQG 88
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 103 bits (246), Expect = 8e-21
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +2
Query: 218 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKK 397
I+NL FDPFA+A + D +H+RIQQRNGRKTLTTVQGL ++D KKI++ KK
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKK 119
Query: 398 EFACNGTVVEHPEYGEVLQLQG 463
+FACNGT+V G+V+QLQG
Sbjct: 120 KFACNGTIVNDVIMGDVIQLQG 141
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 98.7 bits (235), Expect = 2e-19
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +2
Query: 212 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 391
+ +Q FDPFADA VH+R+QQRNGRK+LTTVQGL EY KI++
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDL 63
Query: 392 KKEFACNGTVVEHPEYGEVLQLQG 463
KKEF CNGTVV+ E G+V+QLQG
Sbjct: 64 KKEFCCNGTVVQDSELGQVIQLQG 87
Score = 36.7 bits (81), Expect = 0.80
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+N+ +L ++GLVK + +K+HGF
Sbjct: 88 DQRKNVSTFLVQAGLVKKDNIKIHGF 113
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 94.3 bits (224), Expect = 4e-18
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +2
Query: 242 PFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTV 421
PF S G VH+R QQRNG+K+LTTVQGLS+E+DLK++++A KK F+CNGT+
Sbjct: 13 PFVVDALSEVGKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKRLLKAFKKNFSCNGTI 72
Query: 422 VEHPEYGEVLQLQG 463
++ PE+G +LQ+QG
Sbjct: 73 IDDPEHGPILQIQG 86
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 92.3 bits (219), Expect = 2e-17
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
Frame = +2
Query: 212 MSIQNLNTFDPFADAIKS------SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 373
+ IQN DPFA+ S + L ++R QQRNGRK++TTVQGL DLK
Sbjct: 48 LDIQNFGVSDPFANDTSQAGGAGGSSTHLIRKLRNIRNQQRNGRKSVTTVQGLDKSLDLK 107
Query: 374 KIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
K+VRA KK+F+CNGTV+E PE+G ++QLQG
Sbjct: 108 KMVRALKKQFSCNGTVIEDPEHGSIIQLQG 137
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 89.8 bits (213), Expect = 8e-17
Identities = 37/64 (57%), Positives = 52/64 (81%)
Frame = +2
Query: 272 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVL 451
D VQ +H+R+QQRNGRK+LTTVQGL+ + +LK +V+ CKK+F CNG +VE E+G+++
Sbjct: 39 DSVQGNYIHIRMQQRNGRKSLTTVQGLNPKINLKLVVKECKKKFNCNGCIVEDSEHGDIV 98
Query: 452 QLQG 463
QLQG
Sbjct: 99 QLQG 102
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Frame = +2
Query: 233 TFDPFADAI---KSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEF 403
TFD FADA ++ VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E
Sbjct: 136 TFDAFADAEGEDAAAGRGAGGDYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKREL 195
Query: 404 ACNGTVVEHPEYGEVLQLQG 463
CNG VVE E G+++QLQG
Sbjct: 196 CCNGNVVEDKELGKIIQLQG 215
Score = 33.1 bits (72), Expect = 9.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 432 RSTARCCSFRXDQRENICQWLTKSGLVKPEQLKVHGF 542
+ + + D R ++ +L K+G+V+ + +KVHGF
Sbjct: 205 KELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 241
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 84.2 bits (199), Expect = 4e-15
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E CNG VVE E G+++QLQG
Sbjct: 498 VHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQG 554
Score = 33.1 bits (72), Expect = 9.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 432 RSTARCCSFRXDQRENICQWLTKSGLVKPEQLKVHGF 542
+ + + D R ++ +L K+G+V+ + +KVHGF
Sbjct: 544 KELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 580
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/88 (47%), Positives = 56/88 (63%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACK 394
SIQNLN+ DPFA+ D VH+RI QR+GRK +TTV+GL + DLKKI++ K
Sbjct: 3 SIQNLNSADPFAEDSNLGGDS-GISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKHLK 61
Query: 395 KEFACNGTVVEHPEYGEVLQLQGRPARE 478
K CNG +VE G +++LQG +E
Sbjct: 62 KSLNCNGNIVEEENLGMIIKLQGDKRKE 89
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 78.2 bits (184), Expect = 3e-13
Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 8/81 (9%)
Frame = +2
Query: 218 IQNLN-TFDPFADA-----IKSSEDDV--QDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 373
++NL FDPFA S E V ++ +H+R+QQRNGRKTLTTVQG+ S+Y+
Sbjct: 26 VENLGPAFDPFAPVNDLNDTPSIEKAVGSKNDKIHIRLQQRNGRKTLTTVQGIPSKYNHS 85
Query: 374 KIVRACKKEFACNGTVVEHPE 436
KI++A KKEFACNGTVV+ PE
Sbjct: 86 KILKAMKKEFACNGTVVK-PE 105
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 230 NTFDPFADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFA 406
+T + + + +E V G VH+R+QQR G+K +TTVQGL+ + + ++I R ++ +
Sbjct: 3 DTVEAIVNQQRETERAVLGGQKVHIRVQQRKGKKFVTTVQGLNQKLNFRRINREFQRRWG 62
Query: 407 CNGTVVEHPEYGEVLQLQG 463
CNGTV+ P+ G V+QLQG
Sbjct: 63 CNGTVISTPDAGTVIQLQG 81
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +2
Query: 272 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVL 451
DD Q +H+R++QR GRK TTV+G+ E+D +KI++ KK +CN T+VE E +V+
Sbjct: 13 DDFQTH-IHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWLSCNATIVEEDEGKKVI 71
Query: 452 QLQG 463
+L G
Sbjct: 72 KLNG 75
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 11/68 (16%)
Frame = +2
Query: 293 VHVRIQQRNGRKT-----------LTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEY 439
VH+R QQ GR LTTVQGL +++KK+V+A KK+FAC ++VE +
Sbjct: 71 VHLRCQQTGGRPKRNMEGKKKPHMLTTVQGLPDRFNMKKVVKAFKKKFACACSIVEDKVF 130
Query: 440 GEVLQLQG 463
GEV+Q+QG
Sbjct: 131 GEVIQIQG 138
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 290 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEV-LQLQG- 463
+VH RIQQRNGRK +TT+ G+ YD I++ K+ F CNG++ + + GEV +L G
Sbjct: 27 IVHFRIQQRNGRKCVTTITGIPERYDADLILKHFKRTFNCNGSLQKSKD-GEVEFKLSGD 85
Query: 464 -RPAREYLPVAHQIRLSE 514
R A +A I L E
Sbjct: 86 QRKAASNFFLAEGILLPE 103
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 54.0 bits (124), Expect = 5e-06
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 290 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE-YGEVLQLQ 460
++H+ +++R+ RKT T + G+ E+DL KI+R KK+F C G ++ E YG+ + ++
Sbjct: 21 VIHIHLKKRSARKTQTIIVGIPDEFDLNKIIRFWKKQFNCTGGIISKDEDYGDQVTIR 78
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 212 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 349
+ +Q + FDPFA+A S ++ VH+RIQQRNG+K+LTTVQG
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKKSLTTVQG 79
>UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 family
protein; n=2; Trichomonas vaginalis G3|Rep: Translation
initiation factor SUI1 family protein - Trichomonas
vaginalis G3
Length = 111
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
+H+R QQ + R++LT +QGL + D K++ KK C G ++ +V+QL G
Sbjct: 29 IHIRYQQVSSRRSLTIIQGLPKKLDCDKVLSFFKKSLCCGGEIIAEENGTKVIQLNG 85
>UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1;
Guillardia theta|Rep: Translation factor sui1 homolog -
Guillardia theta (Cryptomonas phi)
Length = 149
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 14/77 (18%)
Frame = +2
Query: 275 DVQDGLVHVRIQQRNGRKTLTTVQGLSSEY------------DLKKIVRACKKEFACNG- 415
++Q + +R+QQR GRK +T ++GL + DLKKI+RA K+ F CNG
Sbjct: 49 NIQSDEIQIRLQQRTGRKFITVIEGLGNIVIINQIDKNKKIPDLKKILRAMKQRFGCNGR 108
Query: 416 -TVVEHPEYGEVLQLQG 463
V+++ +Y VL L G
Sbjct: 109 IDVIKNNDY--VLLLNG 123
>UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Protein
translation factor SUI1 homolog - Mimivirus
Length = 106
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 236 FDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNG 415
+DPF D + + + + +H++ +QR K++T ++ + + DLK ++ K F C+G
Sbjct: 7 YDPFNDGLDTEQHFEK---IHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFHCSG 63
Query: 416 TVVE-HPEYGEVLQLQG 463
++ + + + + +QL G
Sbjct: 64 SIQQNYDDDSKFIQLSG 80
>UniRef50_A1RXI2 Cluster: Translation initiation factor SUI1; n=1;
Thermofilum pendens Hrk 5|Rep: Translation initiation
factor SUI1 - Thermofilum pendens (strain Hrk 5)
Length = 120
Score = 39.1 bits (87), Expect = 0.15
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LVHVRIQQRNGRKTLTTVQGLS-SEYDLKKIVRACKKEFACNGTV 421
L+ +R+++R G + +T + GL + +L+++V K +FAC GT+
Sbjct: 44 LIKIRVEKRKGHRDVTIITGLDVKDPELRRMVSEMKAKFACGGTI 88
>UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_44768_45085 - Giardia lamblia
ATCC 50803
Length = 105
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGRPA 472
+H+ I ++ G+K T V ++ Y+ KIV+A K++ C+ V + + + + ++G
Sbjct: 20 IHIHIVKK-GKKYTTQVVNINQSYNFDKIVKAIKRDLCCSAYVFDETDGTKSIHVRGNYY 78
Query: 473 RE 478
RE
Sbjct: 79 RE 80
>UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 223
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 LVHVRIQQRNGRKTLTTVQGLSSE-YDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
++++++++RN K +TT+ GL DLK+ + K+F C ++ E L+LQG
Sbjct: 142 MIYIKVKERNKNKFITTLSGLEKHGLDLKETSKKISKKFGCGSSINEK----GALELQG 196
>UniRef50_Q00YW3 Cluster: Density-regulated protein related to
translation initiation factor 1; n=2; Ostreococcus|Rep:
Density-regulated protein related to translation
initiation factor 1 - Ostreococcus tauri
Length = 173
Score = 36.7 bits (81), Expect = 0.80
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 314 RNGRKTLTTVQGLSS-EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
RN RK +T V GL + DLK+ +A K+FAC +V + + L LQG
Sbjct: 94 RNRRKMITNVAGLEKFDVDLKEASKAFGKKFACGCSVTKGATGKDELDLQG 144
>UniRef50_Q03SW1 Cluster: Predicted membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted membrane
protein - Lactobacillus brevis (strain ATCC 367 / JCM
1170)
Length = 931
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 333 SVLRPFRCWIRTWTKPS*TSSSELLIASANGSNVLRFWMDIRLNVGSLCFNETLRYYATQ 154
+ + P + R + KP+ TS +E A NG+ + + + + L VG+L FN Y +
Sbjct: 701 ATVHPSQLTYRQFAKPTTTSHTERDEAPNNGTGMAPYMVSVSLFVGALAFNMMFDMYTPR 760
Query: 153 QY 148
+Y
Sbjct: 761 KY 762
>UniRef50_A7Q7W8 Cluster: Chromosome chr18 scaffold_61, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 584
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLSSEY-DLKKIVRACKKEFACNGTVVEHP-EYGEVLQLQG 463
+ + ++R G K +T V G S D + + +K+FAC+ TV E P + G + +QG
Sbjct: 497 IQIMTERRQGNKKVTKVSGFESFLMDAEALASELQKKFACSTTVAELPGKKGHEVLVQG 555
>UniRef50_Q9YBG9 Cluster: Protein translation factor SUI1 homolog;
n=7; Thermoprotei|Rep: Protein translation factor SUI1
homolog - Aeropyrum pernix
Length = 101
Score = 33.9 bits (74), Expect = 5.7
Identities = 13/48 (27%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 278 VQDGLVHVRIQQRNGRKTLTTVQGLSS-EYDLKKIVRACKKEFACNGT 418
V++ ++ +R+++R + +T ++G++ E++LKK+ K A GT
Sbjct: 20 VEEQIIKIRLEKRRFGREVTIIEGINEKEFNLKKLASTLKSRLATGGT 67
>UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|Rep:
CG30115-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 1593
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +2
Query: 170 RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 349
R ++QR+ F R ++ N ++FD F ++++ E+ + + RN T +Q
Sbjct: 932 RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQK 990
Query: 350 LSSEYDLKKIVRACKKE 400
L++ +K A K+E
Sbjct: 991 LAAAMRYRKRDAAVKEE 1007
>UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=15;
Pezizomycotina|Rep: RNA binding protein Tma22, putative
- Aspergillus clavatus
Length = 194
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLSSE-YDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
V ++ +RN RK +T + GL + KK+ + K+FA +V + P E + +QG
Sbjct: 102 VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQG 159
>UniRef50_Q5UZP9 Cluster: Protein translation factor SUI1 homolog;
n=5; Halobacteriaceae|Rep: Protein translation factor
SUI1 homolog - Haloarcula marismortui (Halobacterium
marismortui)
Length = 97
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 293 VHVRIQQRNGRKTLTTVQGLS-SEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQG 463
+++RI +R K +T ++G + D+ + K +FAC GTV E G++ +LQG
Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQI-ELQG 79
>UniRef50_O04659 Cluster: A_TM021B04.2 protein; n=2; Eukaryota|Rep:
A_TM021B04.2 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 597
Score = 33.1 bits (72), Expect = 9.9
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -2
Query: 418 RTVARELLLACPHDLLQVIFRGKALHRSQRLTPVSLLDTDVD*TILNVVLRAFDSIGEWV 239
+T +L+AC + + GK +H + T S DV + NV++ ++ S+G W
Sbjct: 242 QTTLTSILMACSRS--RNLLHGKFIHANLAETVFSKTQKDVAES-WNVMISSYISVGNWF 298
Query: 238 ECVEILD 218
+ VE+ D
Sbjct: 299 KAVEVYD 305
>UniRef50_Q5CQN1 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 718
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 290 LVHVRIQQRNG-RKTLTTVQGLSSEY--DLKKIVRACKKEFACNGTVVEHPEY 439
++ + + R G RK +T + S + DL+++ +C+K+FAC+ +V + +Y
Sbjct: 630 IIEIYTESRMGTRKHVTIISPFISHFNLDLQEVAESCQKKFACSASVSQIKKY 682
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,082,679
Number of Sequences: 1657284
Number of extensions: 16811953
Number of successful extensions: 40921
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 39324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40909
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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