Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_P04
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 124 4e-28
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 124 4e-28
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 124 4e-28
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 124 4e-28
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 124 4e-28
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 124 4e-28
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 124 4e-28
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 124 4e-28
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 124 4e-28
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 124 4e-28
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 123 1e-27
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 122 1e-27
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 122 1e-27
BC070246-1|AAH70246.1| 289|Homo sapiens FGA protein protein. 30 9.9
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 124 bits (299), Expect = 4e-28
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 123 bits (296), Expect = 1e-27
Identities = 58/86 (67%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 385
+IQNL +FDPFADA K +D + GL +H+RIQQRNG KTLTTVQG++ +YD KK+V+
Sbjct: 3 TIQNLQSFDPFADATKG-DDLLPAGLEDYIHIRIQQRNGGKTLTTVQGIADDYDKKKLVK 61
Query: 386 ACKKEFACNGTVVEHPEYGEVLQLQG 463
A KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 62 AFKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 122 bits (295), Expect = 1e-27
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD +K+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKEKLVKA 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 88 DQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 122 bits (295), Expect = 1e-27
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 388
+IQNL++FDPFADA K + + VH+RIQQRNGRKTLTTVQG++ +YD KK+V+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYVHIRIQQRNGRKTLTTVQGIADDYDKKKLVKP 62
Query: 389 CKKEFACNGTVVEHPEYGEVLQLQG 463
KK+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
Score = 44.0 bits (99), Expect = 8e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3
Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
DQR+NICQ+L + GL K +QLKVHGF
Sbjct: 88 DQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC070246-1|AAH70246.1| 289|Homo sapiens FGA protein protein.
Length = 289
Score = 30.3 bits (65), Expect = 9.9
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 179 SLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSS 358
S RD T+NR+S + I+ + V + + H+++ Q+N R L ++ L
Sbjct: 119 SANNRDNTYNRVS-------EDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEV 171
Query: 359 EYDLKKIVRACKKEFA-CNGTVVEHPEY-GEVLQLQGRPAREYLPVAH 496
+ D+K +R+C+ + V+ +Y + QL+ A++ LPV +
Sbjct: 172 DIDIK--IRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPVVN 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,646,111
Number of Sequences: 237096
Number of extensions: 2494601
Number of successful extensions: 5345
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5332
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -