Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P04
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical pr...   109   3e-24
Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical pr...    32   0.64 
Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF068709-4|AAC19253.2|  297|Caenorhabditis elegans Serpentine re...    29   4.5  
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...    29   6.0  
U88168-9|AAC24400.2|  211|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U64858-8|AAB18286.3|  288|Caenorhabditis elegans Serpentine rece...    28   7.9  
U29515-1|AAC06328.1|  449|Caenorhabditis elegans fem-2 protein.        28   7.9  
U28412-8|AAC46598.1|  449|Caenorhabditis elegans Feminization of...    28   7.9  
AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical ...    28   7.9  
AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical
           protein T27F7.3b protein.
          Length = 109

 Score =  109 bits (262), Expect = 3e-24
 Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
 Frame = +2

Query: 212 MSIQNLNTFDPFADAIKS--SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 385
           MSI NLN   P ADA +   +ED V+ G+ H+RIQQR GRKT+TTVQG+ +EYDLK+IV+
Sbjct: 1   MSIANLNR--P-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQ 57

Query: 386 ACKKEFACNGTVVEHPEYGEVLQLQG 463
             KK+ +CNGT+VEHPEYGEV+QL G
Sbjct: 58  YLKKKHSCNGTIVEHPEYGEVIQLTG 83



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 465 DQRENICQWLTKSGLVKPEQLKVHGF 542
           DQR+ +  +L K G+V     +VHGF
Sbjct: 84  DQRDKVKDFLIKVGIVNESNCRVHGF 109


>Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical
           protein F59C6.8 protein.
          Length = 529

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 197 PTFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTV 343
           PTFNR  I N   FDP+  +A K +   + DGL +  + + R  + T+ T+
Sbjct: 397 PTFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447


>Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical
           protein F26D2.14 protein.
          Length = 254

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 360 NMT*RRSCGHARRSSRATVRSWSTRSTARCCSFRXDQRENICQW 491
           N   +R+C     S+ A + S +T  T+ C S+  D   +   W
Sbjct: 184 NQNCQRTCSRCPSSTSARISSSTTSITSTCSSYNPDSSSSCAAW 227


>AF068709-4|AAC19253.2|  297|Caenorhabditis elegans Serpentine
           receptor, class t protein26 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 896 FFFFFTKTCIY*LNYYSXFKNTMSYKN 816
           +F FFT TC++   YY+ F +   + N
Sbjct: 145 YFVFFTPTCVFSSRYYAWFYDPFIFPN 171


>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
           defective protein 45 protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -2

Query: 259 DSIGEWVECVEILDGHTIERRVSLFQRNAAILRNSTI 149
           D+  +WVE V+I +  T+E+++S +Q     +RN+ +
Sbjct: 766 DATFDWVESVKIDNQETLEKKLSDWQAKLEAVRNNRL 802


>U88168-9|AAC24400.2|  211|Caenorhabditis elegans Hypothetical
           protein K11H12.3 protein.
          Length = 211

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +1

Query: 28  RASXHTLLSIFLVSSAITFWS*HXLAVCQRAHXSALSVTVILLSCVVSQRFVETKRPYVQ 207
           + S +  ++ +L +   TF S + L   Q      +  TV++L+ V+ Q  ++   P + 
Sbjct: 103 KLSGYIYVTTYLQARDPTF-SVYVLKTTQSISKMGMKSTVVVLNTVIRQELIDYDMPRIM 161

Query: 208 SYV 216
           SYV
Sbjct: 162 SYV 164


>U64858-8|AAB18286.3|  288|Caenorhabditis elegans Serpentine
           receptor, class t protein25 protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 896 FFFFFTKTCIY*LNYYSXFKNTMSYKN 816
           +F FFT TC++   YY+ F +   + N
Sbjct: 124 YFVFFTPTCMFSSRYYAWFYDPFIFPN 150


>U29515-1|AAC06328.1|  449|Caenorhabditis elegans fem-2 protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 393 RRSSRATVRSWSTRSTARCCSFRXDQRENICQWLTKS 503
           R + R+    W   STA CC+   DQ+     WL  S
Sbjct: 248 RMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDS 284


>U28412-8|AAC46598.1|  449|Caenorhabditis elegans Feminization of xx
           and xo animalsprotein 2 protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 393 RRSSRATVRSWSTRSTARCCSFRXDQRENICQWLTKS 503
           R + R+    W   STA CC+   DQ+     WL  S
Sbjct: 248 RMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDS 284


>AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5a protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 21/76 (27%), Positives = 32/76 (42%)
 Frame = +2

Query: 248 ADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVE 427
           A  +K   + V    +++     +G KTL  V G +  Y       A KK   C G  + 
Sbjct: 234 AGKVKEIVEKVYGDKMNIEPAGGSGYKTLRLVNGTAELY---LHTTAIKKWDTCAGDAIL 290

Query: 428 HPEYGEVLQLQGRPAR 475
               G +L L+G+P R
Sbjct: 291 RTMGGAMLDLEGQPLR 306


>AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5b protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 21/76 (27%), Positives = 32/76 (42%)
 Frame = +2

Query: 248 ADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVE 427
           A  +K   + V    +++     +G KTL  V G +  Y       A KK   C G  + 
Sbjct: 243 AGKVKEIVEKVYGDKMNIEPAGGSGYKTLRLVNGTAELY---LHTTAIKKWDTCAGDAIL 299

Query: 428 HPEYGEVLQLQGRPAR 475
               G +L L+G+P R
Sbjct: 300 RTMGGAMLDLEGQPLR 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,033,487
Number of Sequences: 27780
Number of extensions: 415319
Number of successful extensions: 1008
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)