Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_P01
         (918 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.63 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.83 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.83 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.3  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 156 CPCTHSSSVQTPSTSGILCLEEKQQPEL 73
           C CTH   +   +   I+ ++E QQP L
Sbjct: 566 CMCTHKVDIPLNAIVEIVLVDEVQQPNL 593


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 536 FLFSTNLYFQNFYFLISLF 592
           F+F TN+ FQN + +I++F
Sbjct: 451 FVFLTNMTFQNVFAVINVF 469


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 536 FLFSTNLYFQNFYFLISLF 592
           F+F TN+ FQN + +I++F
Sbjct: 451 FVFLTNMTFQNVFAVINVF 469


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 180 SRTRIMHKNLKAKEEGQCSNGSCKI 254
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 156 CPCTHSSSVQTPSTSGILCLEEKQQPEL 73
           C CTH   +   +   ++ ++E Q P L
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNL 593


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,011
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)