Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O24
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 261 2e-68
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 248 2e-64
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 222 1e-56
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 216 6e-55
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 210 4e-53
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 208 1e-52
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 198 2e-49
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 197 4e-49
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 182 9e-45
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 176 6e-43
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 170 5e-41
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 167 3e-40
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 167 5e-40
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 157 3e-37
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 155 1e-36
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 151 2e-35
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 149 1e-34
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 146 5e-34
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 146 7e-34
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 146 9e-34
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 128 1e-28
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 126 6e-28
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 124 2e-27
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 124 4e-27
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 118 2e-25
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 111 2e-23
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 109 1e-22
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 102 1e-20
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 97 7e-19
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 95 3e-18
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 90 6e-17
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 89 1e-16
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 84 4e-15
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 83 7e-15
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 81 5e-14
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 75 2e-12
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 74 4e-12
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 70 7e-11
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 66 2e-09
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 64 4e-09
UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1; Meta... 64 4e-09
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 63 8e-09
UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp; ... 61 3e-08
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 60 6e-08
UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-1... 58 3e-07
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 58 3e-07
UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1; Ther... 56 2e-06
UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1; Arch... 55 2e-06
UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6; Su... 55 2e-06
UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa calif... 54 5e-06
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 54 7e-06
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 52 2e-05
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 51 4e-05
UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp sub... 51 5e-05
UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1; A... 50 8e-05
UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089... 49 1e-04
UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1; Acan... 49 2e-04
UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4; Py... 49 2e-04
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 46 0.001
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 46 0.002
UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.088
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 36 1.9
UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3; ... 36 1.9
UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13; ... 35 2.5
UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 34 4.4
UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5; Methanos... 34 5.8
UniRef50_Q1V1F8 Cluster: Putative uncharacterized protein; n=2; ... 33 7.7
UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subuni... 33 7.7
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 261 bits (639), Expect = 2e-68
Identities = 116/168 (69%), Positives = 147/168 (87%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVK
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVK 168
Score = 66.9 bits (156), Expect = 7e-10
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 706 KVSATGDIGSANVKLAQTASIDKEEXAVVIEMEXP-SL*RLPASTQLFTKATSLSPQVXL 882
K SA+G++G+ N+KL+QT+++DKEE AV IEM P L FTKAT LS V L
Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTL 227
Query: 883 SXSAXVPLV 909
S SA VPLV
Sbjct: 228 SMSADVPLV 236
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 248 bits (607), Expect = 2e-64
Identities = 110/168 (65%), Positives = 140/168 (83%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M E RL++ S+LKKVLEA+KDL+ A FDC G LQAMD+SHV+LVSL LR++GF+ Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDRN+SMGMNLG+MSK+LKCAG+ D +TIKA D +D VTF+FESP Q+K++D+EMKLM+
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+D EHLGIP+ EY +RMPS EF+RIC+DLS G+++VIS TKEGVK
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVK 168
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 694 KRRSKVSATGDIGSANVKLAQTASIDKEEXAVVIEMEXP-SL*RLPASTQLFTKATSLSP 870
K K S GDIG+AN+ L Q ++DK E A+VIEM P SL FTKAT LS
Sbjct: 164 KEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSE 223
Query: 871 QVXLSXSAXVPLV 909
V +S S+ +P+V
Sbjct: 224 TVTISLSSELPVV 236
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 222 bits (542), Expect = 1e-56
Identities = 97/167 (58%), Positives = 133/167 (79%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQAMDNSH++LV+L L A FD+Y
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDRN+ +G+NL S++KILKCA D D VT+KA D+AD + +FESP +++V +YEMKLM+
Sbjct: 61 RCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
+D EHLGIP+T+Y T+ M S+EFARICRDL+ GES+ I C+KEGV
Sbjct: 121 IDQEHLGIPDTQYDATVSMSSAEFARICRDLAVLGESVKIECSKEGV 167
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 216 bits (528), Expect = 6e-55
Identities = 89/168 (52%), Positives = 135/168 (80%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
LD +H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++
Sbjct: 121 LDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIR 168
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 210 bits (513), Expect = 4e-53
Identities = 94/168 (55%), Positives = 132/168 (78%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EARL ++ +LKKV++AIKDL+ FDC+D+GI LQAMDNSHV+LVS+ L+A+GF Y
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDRN+++G+NL S++K+L+ A ++D +TIKA+D D + VFES +++S+Y++KLM+
Sbjct: 61 RCDRNVALGVNLTSLTKVLRAAQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+D EHLGIP+TEY+ I MPSSEF RIC DL ES+ I +K+GVK
Sbjct: 121 IDQEHLGIPDTEYAAVINMPSSEFKRICVDLMALSESVSIEASKDGVK 168
Score = 37.5 bits (83), Expect = 0.47
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 706 KVSATGDIGSANVKLAQTASIDKEEXAVVIEMEXP-SL*RLPASTQLFTKATSLSPQVXL 882
K S GDIG+ V L +++DK + V IE+ P SL F KA LS V L
Sbjct: 168 KFSCAGDIGNGAVTLRSHSNVDKPDLNVDIELTEPVSLTFSLKYLVNFCKAAGLSKSVKL 227
Query: 883 SXSAXVPLV 909
S VPL+
Sbjct: 228 CLSNEVPLL 236
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 208 bits (508), Expect = 1e-52
Identities = 93/176 (52%), Positives = 132/176 (75%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EA+L + +LKK+L+AIK+L+T A F+C++ GI LQAMDNSHV+LV++ + GF +Y
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQAMDNSHVALVAVKILVSGFKRY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDR + +G+NLGS++K+LKCA D D T+KA D AD + ++E+ N +++++YEMKLM
Sbjct: 61 RCDRPMPLGVNLGSLTKVLKCAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLME 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQATSA 733
+D + L IP+TEY + MPSSEFARI RDLSQ GES+ I +KEGV+ + SA
Sbjct: 121 IDADALTIPDTEYEARVTMPSSEFARIVRDLSQLGESVRIEVSKEGVRFAAEGESA 176
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 198 bits (483), Expect = 2e-49
Identities = 86/167 (51%), Positives = 126/167 (75%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQAMDNSHV+L ++ LR D F+++
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQAMDNSHVALSAIELRTDCFEEF 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDR +S+G++L S+ KILK A + D + +K D+ D + FESP ++V ++EMKLM+
Sbjct: 61 RCDRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
+D EHLGIP+T+Y ++M S EF RICRDL+ GES+ I +KEGV
Sbjct: 121 IDSEHLGIPDTQYDAVVKMSSGEFGRICRDLANIGESVKIEVSKEGV 167
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 197 bits (480), Expect = 4e-49
Identities = 81/170 (47%), Positives = 125/170 (73%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEA ++LK+++E KDLL ATFDCD+ G+ +Q MD SHV+LVSL L A+GF KY
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDTSHVALVSLQLHAEGFKKY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDRN+ + +++ S+SKI+KC ++ +V +KA+D D + FVF N ++ Y +KLM
Sbjct: 61 RCDRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQGDVMAFVFN--NDNRICTYTLKLMC 118
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSR 715
+D+EHLGIP+++Y C + M S EFA++C+D++QF +++SC+K+G++ R
Sbjct: 119 IDVEHLGIPDSDYDCVVHMSSVEFAQVCKDMTQFDHDIIVSCSKKGLQFR 168
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 182 bits (444), Expect = 9e-45
Identities = 79/165 (47%), Positives = 122/165 (73%)
Frame = +2
Query: 212 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 391
EA L ++ +LKKV++AIKDL FDC + G+Q+Q+MD+SHV+LVSL LR F ++RC
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQSMDSSHVALVSLLLRESAFAEFRC 63
Query: 392 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 571
DR S+GMN+ S++KILK G D++ ++ + +AD V+F ES +++++D+E+KLM ++
Sbjct: 64 DRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIE 123
Query: 572 LEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
EH+ IPE Y + ++PSSEF +ICRDL +FGE+M + +KEG+
Sbjct: 124 SEHMEIPEQHYKVSAKLPSSEFQKICRDLKEFGETMQVKASKEGI 168
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 176 bits (429), Expect = 6e-43
Identities = 74/168 (44%), Positives = 123/168 (73%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEARL IL+KV EAI +L++ +C+++G+ +QAMDNSHVSLV L L+ F++Y
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQAMDNSHVSLVGLYLKDTAFERY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCD+N ++G+N ++ K+LK + D V ++ D+++++ F+FE+PN ++VS++E+ L++
Sbjct: 61 RCDKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDDSESLIFIFETPNGDRVSEFELTLIS 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+D + L IPET +S + MPS+EF R+CRD++QF +S+ I T + V+
Sbjct: 121 IDQDSLQIPETSFSSVVTMPSNEFQRLCRDMAQFSDSLSIDVTSKNVR 168
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 170 bits (413), Expect = 5e-41
Identities = 74/169 (43%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEA+ + KK++EAIK+L+ + + GI LQAMD SHV+LV+L L GF KY
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDTSHVALVALQLNEKGFKKY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQ-DNADNVTFVFESPNQEKVSDYEMKLM 562
RC+++++MG+++ ++ KILKC+G+ D +T++ Q + ++F FES N ++S++++ LM
Sbjct: 61 RCEKSLTMGLSIENLQKILKCSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLM 118
Query: 563 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+LD E LG+P+T+YS I+MPS+EF +ICR+L E++ I +K+G+K
Sbjct: 119 SLDQEQLGVPDTDYSSVIKMPSNEFTKICRELGNINEAIGIETSKDGIK 167
Score = 36.7 bits (81), Expect = 0.82
Identities = 26/68 (38%), Positives = 29/68 (42%)
Frame = +1
Query: 706 KVSATGDIGSANVKLAQTASIDKEEXAVVIEMEXPSL*RLPASTQLFTKATSLSPQVXLS 885
K GDIG V + KEE E +L LF KA +LSPQV LS
Sbjct: 167 KFYVKGDIGEGQVSVKSNDGEKKEERVECDVDEPVNLSFAVRYFNLFNKAAALSPQVILS 226
Query: 886 XSAXVPLV 909
S PLV
Sbjct: 227 MSQDQPLV 234
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 167 bits (407), Expect = 3e-40
Identities = 72/168 (42%), Positives = 121/168 (72%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EA++ +S+ K+++E I L+ +A FDC+ G+ +QAMD+SHV+LV + LR D F KY
Sbjct: 1 MLEAQVQYASLWKRLVECINGLVNEANFDCNPGGLSIQAMDSSHVALVHMLLRDDCFVKY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
+C+RNI +G+NL S+SK+LK D+++++ D++D VT E+P + + +Y++KL+
Sbjct: 61 QCERNIILGLNLASLSKVLKIVDGNDSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLE 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
++ E +GIPE +Y T+ + S+EFA+I RD+ FG+++ I+ +KEGVK
Sbjct: 121 IEAESMGIPEMDYRSTVTLNSAEFAKIVRDMQVFGDTVTIAISKEGVK 168
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 167 bits (405), Expect = 5e-40
Identities = 72/167 (43%), Positives = 115/167 (68%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M E RL LKK+L+A++DL+ +A +C + G+ LQAMD +HV+LVS+ L A+GF+KY
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDTAHVALVSMNLNANGFEKY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
C +N S+G+NLG++ KILKC + D +T++ ++ + F FE+ + ++ +++M LM+
Sbjct: 61 NCAQNTSLGVNLGAIQKILKCGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
+ EHL IP+ E TI + SEF +ICRDL+QFG+++ I+ K V
Sbjct: 121 ISSEHLSIPDAEPEATITLGCSEFQKICRDLAQFGDTVKITVEKSRV 167
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 157 bits (382), Expect = 3e-37
Identities = 68/168 (40%), Positives = 114/168 (67%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EA+ +S+ K++++ KD + F C ++GI QA+D+S V LVSL + + F +Y
Sbjct: 1 MLEAKFEEASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDDSRVLLVSLEIGVEAFQEY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCD +++GM+L S+SKIL+C + DT+T+ A + D++ +FE ++++++Y +KLM+
Sbjct: 61 RCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+D + L I E +Y T+ +PSSEF++I RDLSQ +S+ I TKE +K
Sbjct: 121 IDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSINIMITKETIK 168
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 155 bits (376), Expect = 1e-36
Identities = 71/170 (41%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EA+L +SILKK+ E IKDL+ A D D++G++LQA+D +HVSLVSL L GF Y
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQALDGNHVSLVSLHLLDSGFSHY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDR +G+N+ S++K+ K G ++V I ++D+ DN+ FVFE+ ++KV+++ +KLM+
Sbjct: 61 RCDRERVLGVNIASLNKVFKLCGANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMS 120
Query: 566 LDLEHLGIPETE--YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
++L+ L IP+ E + + + S E I R+LS+F +++ I +K
Sbjct: 121 IELDSLNIPDCEEGFDAEVELSSKELTNIFRNLSEFSDTVFIEIDSNCIK 170
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 151 bits (367), Expect = 2e-35
Identities = 69/170 (40%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M EA+L +S+L+++ E+IKD+++ DCD+ G++LQAMD+SHV+LV+L L GF +
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQAMDSSHVALVALKLDDAGFVHF 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDR +G+NL S+ K+ K + D+ +I+ ++++D VTFVFE+ EK+S + ++LM
Sbjct: 61 RCDRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMA 120
Query: 566 LDLEHLGIP--ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+D + L +P ET + T+ M + EFA + R + +F +S+ + K GVK
Sbjct: 121 IDQDALRVPEDETAHDVTVTMSAREFANVVRIMGEFSDSVRVEVDKLGVK 170
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 149 bits (360), Expect = 1e-34
Identities = 82/194 (42%), Positives = 117/194 (60%), Gaps = 9/194 (4%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M E R ++ S+LKKV E IK+ + F C GI +QAM NS++S+++L L + GF+ Y
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAM-NSNLSILALVLHSSGFEHY 59
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCD N SMGMNL SM ++L A D +TIKA D D VTF FESP Q ++S++EM+L++
Sbjct: 60 RCDHNFSMGMNLYSMVELLNRANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVD 119
Query: 566 LDLEHLGIPE-----TEYSCTIRMPSSEFARICRDLSQ----FGESMVISCTKEGVKSRQ 718
+D I E EY ++MPSS F ICR++S+ F +VI+ T++ VK
Sbjct: 120 IDSPRYWIREDEAKYMEYLAMVKMPSSIFDGICRNISRIDGMFDLDLVITVTQKYVKFST 179
Query: 719 QATSAQRTSSWPRP 760
Q ++S P
Sbjct: 180 QGNENLGSASVLNP 193
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 146 bits (355), Expect = 5e-34
Identities = 64/168 (38%), Positives = 118/168 (70%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M A+L +S+LKK+++A+KDL++ A + ++G+ LQAMD+SHVSLVSL + + F+ Y
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQAMDSSHVSLVSLIIPPEEFEVY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
+C++ S+G+NL KILKCA ++D+V I ++N + +TF+F + E+ S+++++L+
Sbjct: 61 QCEKIQSLGINLNWFYKILKCATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLE 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
++ E LGIPET YS + + + E+ R+C ++ G+++ +S ++ +K
Sbjct: 121 INNETLGIPETIYSAVVTLTAVEYKRVCSEMLTIGDTVYLSISENTIK 168
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 146 bits (354), Expect = 7e-34
Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 5/173 (2%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEARL + + KK+ EA+K+L DCD +G+ LQAMD+SHV+LVSL ++ D F+ Y
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQAMDSSHVALVSLNIQPDAFEHY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDT-VTIKA-QDNADN-VTFVFESPNQEKVSDYE-- 550
RCDR + +G+++ +SK +K DKDT +T+K DN DN +T FE N +S E
Sbjct: 61 RCDRPVVLGLDMQQLSKFMKFC-DKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECI 118
Query: 551 MKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
++LM+++ EH+ IPE EY C + MPS+ F I RD+S G+ + + + + +K
Sbjct: 119 LRLMDIEQEHISIPEEEYECNVTMPSNLFQSIVRDMSGIGDEVSLEISGKYIK 171
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 146 bits (353), Expect = 9e-34
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 308 IQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQD 487
+ LQAMD+SHV+LVSL L FD YRCDR I++G++L +MSK LKCA + DT +K ++
Sbjct: 1 MSLQAMDSSHVALVSLKLEVGLFDTYRCDRTINLGLSLANMSKALKCANNDDTCMLKYEE 60
Query: 488 N-ADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQ 664
N D++ F F P ++K D +K+M++D EHLGIP+ +Y+ MP+ EF + C+DLS
Sbjct: 61 NEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYAVVCEMPAGEFQKTCKDLST 120
Query: 665 FGESMVISCTKEGV 706
F +S+ I+ TK G+
Sbjct: 121 FSDSLNITATKAGI 134
Score = 40.3 bits (90), Expect = 0.067
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 721 GDIGSANVKLAQTASIDKEEXAVVIEMEXPSL*RLPAS-TQLFTKATSLSPQVXLSXSAX 897
GDIGS+ V + +++ D E AV +E++ P FTKAT+LS +V LS
Sbjct: 140 GDIGSSVVTYSPSSNTDDETEAVTLEVKDPVNVNFSIKYMNQFTKATALSDRVRLSLCND 199
Query: 898 VPLV 909
VP+V
Sbjct: 200 VPVV 203
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 128 bits (310), Expect = 1e-28
Identities = 58/174 (33%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M E +L + +L+++ + ++D+++ D D G+ LQA+D +HV+LV L L GF Y
Sbjct: 1 MLELKLNHAVVLRRIFDCMRDIISDGNIDFDATGMSLQALDGNHVALVHLKLHESGFSLY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
RCDR ++G+NL S++K K + D+V I++++ D ++F+FE+ ++V + +KLM+
Sbjct: 61 RCDRPRALGINLNSVTKAFKSCSNHDSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMS 120
Query: 566 LDLEHLGIPE-TE-YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQ 721
++ + L IPE TE Y I + S E A IC+ +++F +++ + + V Q
Sbjct: 121 IEQDALSIPENTEGYDAEITLGSKELANICKQMNEFSDTLKLDVSINSVSFATQ 174
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 126 bits (305), Expect = 6e-28
Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFE R+ KK+ E +KD+ T+ +CD+NGI++Q+MD SHVSLV L + +D F Y
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQSMDCSHVSLVDLNIVSDFFQHY 59
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTF---VFESPNQEKVSD---Y 547
RCD+N +G+++ M KIL +K TV + +DN ++ + + Q D
Sbjct: 60 RCDKNCVLGISINFMLKILSVIKEKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEI 119
Query: 548 EMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
++KL+N EHL IP++EY C M S +F + L+ G+++ IS K+ +
Sbjct: 120 QVKLINAQKEHLEIPQSEYHCQCTMKSKKFQEFTKYLNSIGDNVSISMKKDAM 172
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 124 bits (300), Expect = 2e-27
Identities = 63/167 (37%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Frame = +2
Query: 209 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 388
F A+ +++ K+V+E++K + + FDC D GI +Q MDNSHVSLVSL + D FD+++
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQCMDNSHVSLVSLLIETDAFDEFQ 63
Query: 389 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 568
C + I++G+NL +SKILK A D D I D+ S K + + L+++
Sbjct: 64 CLKPITLGINLTHLSKILK-ALDNDCGLILDVKKVDDAVLSITSEGTNKTMKFGLNLVDI 122
Query: 569 DLEHLGIPETEYSCTIRMPSSEFARICRDLSQFG-ESMVISCTKEGV 706
+ E + IPE + I + S+EF +I +D S G +S+ I CTK V
Sbjct: 123 EAESVEIPELQSDAIITLSSAEFLKITKDFSALGDDSITIGCTKNEV 169
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 124 bits (298), Expect = 4e-27
Identities = 57/167 (34%), Positives = 104/167 (62%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFE + + +L++V+E I +L+ + FDC +NG+ +QAMD++HV L ++ L DGF Y
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINLLRDGFLHY 59
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
C + + + + + KIL C+G DT T++ + + +FE+P ++++D+E+ L++
Sbjct: 60 DCSQPLVIDIPIDKFKKILACSGPDDTFTLRF-NGGSVLLIMFETPAHDRITDFELNLLD 118
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
++ + + +PE E I+M S + RI +D FG+ + IS TK+GV
Sbjct: 119 IEQDAMSVPELEPHLHIQMNSIDLKRIVKDYQTFGDVITISGTKDGV 165
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 118 bits (284), Expect = 2e-25
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFE RL L+++ EA++++ + DC ++G+ +QAMDNSH+SL+ L L D F Y
Sbjct: 1 MFECRL-DGMFLRRLFEALREICNDVSIDCSEDGLSMQAMDNSHISLIHLCLAPDFFQLY 59
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTI-KAQDNADNVTFV--FESPNQEKVS----D 544
RCD ++G+N+ M KIL +K + + + D+ D V FV E+ ++ +
Sbjct: 60 RCDTPCTLGLNISFMLKILAVVREKSVIYLARGDDSEDPVLFVRIIEAGGYDEAESDALE 119
Query: 545 YEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
++K+++++ EHL IP+ EY+C M S F + L G+++VIS K+ +K
Sbjct: 120 AQVKMIDVEREHLDIPDCEYTCKCVMNSRRFQEFAKYLHSIGDTVVISMNKDVIK 174
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 111 bits (268), Expect = 2e-23
Identities = 49/167 (29%), Positives = 100/167 (59%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
M E ++S KK+++++K L+ +F C +G+ LQAMD SHVSL+S++L AD F+ Y
Sbjct: 1 MVEIVFEQASFFKKIIDSLKGLVEDISFKCTSDGMDLQAMDISHVSLISISLPADIFNTY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
C +++ N+ ++K+LK A D + I + +++T + +++K + + +K ++
Sbjct: 61 NCSEEMNLAFNVDVLNKVLKSASTDDYLKISTEKPNEDITIQLSTQSEDKNTRFNLKPVD 120
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
++ + + IPE Y + + S+ F ++ R LS+ +S+ + CT+ +
Sbjct: 121 INGDAVSIPEHIYKAKLSLSSNAFNQLIRSLSEVNDSVAVRCTEGSI 167
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 109 bits (261), Expect = 1e-22
Identities = 50/157 (31%), Positives = 90/157 (57%)
Frame = +2
Query: 212 EARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC 391
EA ++ + ++ A++ LLT ATFDCD +G++L ++D V+L L LR GF +Y C
Sbjct: 2 EATFATAAAFQSIVGALRGLLTHATFDCDAHGMRLHSLDVERVALADLRLRRAGFARYAC 61
Query: 392 DRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLD 571
+R +S + + + KI++ A +T++ D V +E+ + + ++LD
Sbjct: 62 ERKLSFSVPVRGLVKIVRTADPSAPLTMRVAARDDRVRLAYET--ARRAVSCTLAQISLD 119
Query: 572 LEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMV 682
+ LG+P+ EY+C + +PS+E R C DL++ G + V
Sbjct: 120 ADRLGVPDKEYTCVLAVPSAELTRACADLARLGATTV 156
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 102 bits (245), Expect = 1e-20
Identities = 45/161 (27%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
+F R L+ +++K + + +K++L GI++ A+D + VSLV L L ++ F++Y
Sbjct: 7 LFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFEEY 66
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN-VTFVFESPNQEKVSDYEMKLM 562
+C+ +G+N+ +M K+L+ AG D++ + N + + ++ + ++ + MKL+
Sbjct: 67 KCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLI 126
Query: 563 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVI 685
+D + + + E+ I MP++ F RICRD+S + +VI
Sbjct: 127 EIDSVEIEVGDIEFDTIIVMPANYFQRICRDMSDITDHLVI 167
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 96.7 bits (230), Expect = 7e-19
Identities = 50/179 (27%), Positives = 101/179 (56%)
Frame = +2
Query: 245 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 424
K+ E++KDLL+++TF+ +N + +Q++D+SH++L+ + ++AD F+ ++ +N
Sbjct: 14 KLFESMKDLLSESTFEFKENFLTIQSIDHSHITLLEVDIQADYFENFKEFVGTKFKINFQ 73
Query: 425 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 604
+ K LK + ++D+V +K + + + VFE+ ++++YE+ L E + +P +Y
Sbjct: 74 GLIKALKTSTNEDSVMMKYDETTNFFSLVFEN-KDSRIAEYELNLFKSIKEKITVPVDKY 132
Query: 605 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQATSAQRTSSWPRPLLLTKRR 781
TI M S E ++ +DL G+ +VI+ V + TS + + LTKR+
Sbjct: 133 DATISMNSLELTKLAKDLINVGDIVVINIHPGVVVFTAKGTSGRAIIIYKNTNNLTKRK 191
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 94.7 bits (225), Expect = 3e-18
Identities = 40/154 (25%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
+F R ++ S++K + + +K++L + +G+++ AMD + VSLV + L A+ F++Y
Sbjct: 36 LFCIRTVQGSVIKSLFDTLKEILHDVSITFSPSGVKISAMDGAKVSLVHMKLDAEAFEEY 95
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMKLM 562
C+ +G+N+ ++ K+L+ G +D++ + + N + ++ + + + +KL+
Sbjct: 96 VCNNTYEIGVNVTNLFKLLRTTGSRDSIMFRYLKSNPHVLEITIQNFEKNSTTQFFLKLI 155
Query: 563 NLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQ 664
+D + I + E+ I +PS+ F R+CRD+S+
Sbjct: 156 EIDSACIDINDLEFDAIISIPSNYFQRLCRDMSE 189
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 90.2 bits (214), Expect = 6e-17
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Frame = +2
Query: 209 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 388
FE + LKK+ E + L+ D+G+ ++ +DN ++L+SL L F +R
Sbjct: 8 FELTFRDAGTLKKIFETLVPLVKDTPVSITDHGLSIETIDNGRIALISLHLPTQFFKNFR 67
Query: 389 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN-ADNVTFVFESPNQEKVSDYEMKLMN 565
C+R S+G+ S K++K + D VT+ + N +D + + ES + ++ ++L
Sbjct: 68 CERACSLGVRTASFLKVIKFCSNDDLVTLSQRSNSSDQLDILVESRKYSQTMNFSLRLFR 127
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGES 676
D + + + E+ T+ + S FA + RDL G++
Sbjct: 128 SDADQIDVIRPEFDSTVSIDSGRFAGMVRDLMGIGKT 164
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 89.0 bits (211), Expect = 1e-16
Identities = 48/176 (27%), Positives = 88/176 (50%)
Frame = +2
Query: 209 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 388
F A+ S LK ++ AI L+ +ATF GI + MD SHV+L+ ++ F+KY
Sbjct: 3 FSAKTSGSDDLKAIISAISTLVEEATFVATAEGITFRGMDPSHVALIDISWPNSAFEKYE 62
Query: 389 CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNL 568
CD NI G+ + +K++K A KD++TI + D++ + N++ Y+++L+
Sbjct: 63 CDSNIKFGVRIDEFTKLIKRADKKDSITISV--SKDSMLLIDIGSNKK----YKIRLIES 116
Query: 569 DLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQATSAQ 736
+P+ Y I + ++ F +I D+ + + I GV+ + S +
Sbjct: 117 SATDTPLPKISYDAKIELATTSFEKILGDVQVVSDYLTIKAKPTGVEFAGKGDSGE 172
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 84.2 bits (199), Expect = 4e-15
Identities = 41/157 (26%), Positives = 82/157 (52%)
Frame = +2
Query: 233 SILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 412
S++K++LE++ +++ A + G+ +Q MD +HV+ + L + F KYRCDR + +G
Sbjct: 22 SLMKRILESLSEIVETADIKATEKGLSIQVMDVTHVAFADIFLSSTMFTKYRCDRELVIG 81
Query: 413 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 592
+ L ++ KI+K + T + + + + + V +++KL D E IP
Sbjct: 82 VQLKTLIKIIKGMSVEGGGTFRMECDDATTNLNIRNTREGNVLSFKLKLFTSDSEAYNIP 141
Query: 593 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEG 703
E ++ + +P+ EF + + + FG+ V+ EG
Sbjct: 142 EFDFDASATIPADEFMYVPKLVGTFGD--VVGVQAEG 176
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 83.4 bits (197), Expect = 7e-15
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Frame = +2
Query: 254 EAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMS 433
E +K+++T C+ +GI L +MD SHV++V + L D F KYRCDR + +G+++ ++
Sbjct: 1 ECLKEMVTDVNLVCNASGISLDSMDGSHVAVVDVRLAVDLFHKYRCDRPVQLGLSVPNLL 60
Query: 434 KILKCAGDKDTVTIKA-------QDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGI 589
L+ +T+ + D D + + E P E++L++++ E L +
Sbjct: 61 LALQPVKSAETLVHLSSLHGDDEDDEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEV 120
Query: 590 PE-TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK--SRQQATSAQRTSSWPRP 760
PE TE+ T + S E + R L+ ES+V+ K ++ +R + +A R P
Sbjct: 121 PEHTEHEATAVVRSKELQDLVRYLNSLSESIVVKMDKTHMQLSARGDSVAASRKMQ-PES 179
Query: 761 LLLT 772
L+ T
Sbjct: 180 LVCT 183
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 80.6 bits (190), Expect = 5e-14
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MFEA+ KK +E I+ ++ ++ + GI +Q D S +S + LT+ + F +
Sbjct: 1 MFEAKFKNPIAFKKAMEVIETVVEFSSLEVTSEGISMQCSDTSRISFIKLTMMKEAFKSF 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
+N+S+ + + + KILK D +TI + +N + F+ + + YE KL +
Sbjct: 61 TFTKNLSLSVKMSGLCKILKTCTDASVLTIWSGENDSHDYLNFKIKTGKSLKSYEYKLYH 120
Query: 566 LDLEHLGIP-ETEYSCTIRMPSSEFARICRDLSQFG 670
D + G+ + + + M S E R+CR L G
Sbjct: 121 FDSQDYGMSNDLQVTGRAMMHSVELKRLCRHLDLLG 156
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 75.4 bits (177), Expect = 2e-12
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = +2
Query: 200 INMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFD 379
+ MF + +KK+ DL+ A + G+ +Q+MD SHVSLV+L + F
Sbjct: 13 LQMFTIVSDAAETIKKLFVVFNDLVDIANLSFTNEGLSVQSMDTSHVSLVNLKIGKSYFK 72
Query: 380 KYRCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDNADNVTFVFESPNQEKVSDYEMK 556
Y + ++G+ + + +IL C G+ D +TI DN D + + + SD++MK
Sbjct: 73 DYSIAQEATVGIKISNFVRILDCVGN-DEITISFTYDNPDELIV------KSEYSDFKMK 125
Query: 557 LMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVI 685
++++ E + IPE + I S+ + ++++ FG+++ I
Sbjct: 126 TIDIETEEMEIPEMDIDVLIDADSNIIQKYLKNMAGFGDTVKI 168
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/158 (27%), Positives = 78/158 (49%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MF+A L +IL+ +AI ++ + G++L A+D SH++ V L L+A+ FD+Y
Sbjct: 1 MFKAELNDPNILRTSFDAISSIVDEVQIQLSAEGLRLDALDRSHITYVHLELKAELFDEY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
CD + ++ + K+LK A D V + + N+ FE E V ++++L++
Sbjct: 61 VCDEPERINVDTEELMKVLKRAKANDRVILSTDEG--NLIIQFEG---EAVRTFKIRLID 115
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESM 679
++ E PE EY +P D+ F + +
Sbjct: 116 IEYETPSPPEIEYENEFEVPFQLLKDSIADIDIFSDKI 153
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 70.1 bits (164), Expect = 7e-11
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Frame = +2
Query: 242 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 421
KKV+ A +L+ + F+ D+NGI+ AMD SHV+LVS+ + D F++Y D +G++L
Sbjct: 12 KKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDL 70
Query: 422 GSMSKIL-KCAGDKDTV-TIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 595
++ KI+ + GD+ + + + N N+TF + ++ Y++ NL +P+
Sbjct: 71 EALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSNLK-----VPD 125
Query: 596 TEYSCTIRMPSSEFARICRD 655
EY ++ + + F +D
Sbjct: 126 IEYPNSVSIKAGAFVEALKD 145
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 65.7 bits (153), Expect = 2e-09
Identities = 35/147 (23%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +2
Query: 236 ILKKVLEAIKDLLTQATFDCD-DNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMG 412
I + ++ AI ++ + F D + G +AMD SHV ++++ D F+ + D + +G
Sbjct: 10 IWRYIVSAISKVIEEGVFVVDPEEGFLFRAMDPSHVIMLNMRFPRDSFEVFEVDSKVELG 69
Query: 413 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 592
+N ++K+L+ A +D + I + N V+F F K + + L+++ E L P
Sbjct: 70 VNFEDVAKVLRRASKEDKLEITSDGN--TVSFAFIGKGYRK---FTLPLLDITAEELPEP 124
Query: 593 ETEYSCTIRMPSSEFARICRDLSQFGE 673
+ E+ +++ S + +D+ G+
Sbjct: 125 QLEFKAIVKVMSDVYRDAIKDVELIGD 151
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 64.5 bits (150), Expect = 4e-09
Identities = 43/170 (25%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Frame = +2
Query: 197 NINM-FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADG 373
N+N+ F+ + +KK+ + +L ++G+++Q MD SHV+L ++ +
Sbjct: 27 NMNLGFKVSCQDTDAVKKIFALLDELNDDVNLMFTEHGLKIQTMDTSHVALSTVKISKGF 86
Query: 374 FDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEM 553
F +Y + ++G+ + +M ++L C D ++D DN+ + S Q ++ +
Sbjct: 87 FTEYVVPQFTTIGIKISTMIRVLGCI-DGGFSFEYSEDTPDNL--IVRSDTQ----NFML 139
Query: 554 KLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEG 703
++LD E + P+ EY I SS + ++L+ FG+S +S T EG
Sbjct: 140 NTIDLDSEEMEAPDAEYDVEIDADSSVIQKYFKNLALFGDS--VSVTSEG 187
>UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1;
Metallosphaera sedula DSM 5348|Rep: DNA polymerase
sliding clamp - Metallosphaera sedula DSM 5348
Length = 245
Score = 64.5 bits (150), Expect = 4e-09
Identities = 32/163 (19%), Positives = 84/163 (51%)
Frame = +2
Query: 242 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 421
K V+EA+ L+ + TF +G+ + A+D +H+SL+ L + F+++ + G N
Sbjct: 12 KTVIEALSKLIDEVTFTFTSSGLDVVAVDRAHISLIKLHFPKEAFEEFDVEDQFRFGFNT 71
Query: 422 GSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 601
M K++ A K+ + +++++ ++ V + P +E + ++ + + ++ L + +
Sbjct: 72 QYMLKVMASAKRKEKIEMESREESEIVIRMLGEPPRE----FTIRNIEVPIQELPELKLD 127
Query: 602 YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQATS 730
+ ++ S F + +++ +S+ I T+ +K R + ++
Sbjct: 128 FDVKAKITSGGFKKAVSEIATVSDSVEIDATEMEIKLRSKEST 170
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 63.3 bits (147), Expect = 8e-09
Identities = 40/155 (25%), Positives = 75/155 (48%)
Frame = +2
Query: 236 ILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGM 415
I++K L + +L + G+++ AMD HVSL ++ FD Y + +G+
Sbjct: 25 IMRKALALLSELSDDVNITFAEQGMKIVAMDTGHVSLTAVKFAKGMFDVYSLGKETVIGV 84
Query: 416 NLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 595
+ ++ K+L C D T + ++ D F + + +++M L++LD E + IP
Sbjct: 85 KVSNLVKVLSCV-DGPTSFVYDEETPD--FFNISTTH----GNFKMGLIDLDSEEMLIPH 137
Query: 596 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTKE 700
++ I SS F + ++LS FG ++ I E
Sbjct: 138 MDFEVEIDADSSVFQKHVKNLSMFGGALRIQADDE 172
>UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Probable DNA
polymerase sliding clamp - Mimivirus
Length = 464
Score = 61.3 bits (142), Expect = 3e-08
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Frame = +2
Query: 305 GIQLQAMDNSHVSLVSLTLRADGFDKYRCDR-NISMGMNLGSMSKILKCAGDKDTVTIKA 481
GI++ + + +LV + L A F+ +RCD I++G+++ ++ LK D D + I
Sbjct: 242 GIRIIRLTEDNNTLVKVVLEAANFEYFRCDEPKITVGVDMHTLHSHLKMINDDDPIVIYM 301
Query: 482 QDNADNVTFVFE-SPNQEKVSDYEMKLMNLDL--EHLGIPETEYSCTIRMPSSEFARICR 652
+ + ++ S N + + E++L +D+ + +P+TE+ I M S +F IC+
Sbjct: 302 KKDIQGSLYIRSLSENNDNSEEREIELFLMDIINPEIPVPKTEFQNRITMKSDKFHLICK 361
Query: 653 DLSQFGESMVISCTKEGVKSRQQATSAQRTSSW 751
LSQ + I+ + + Q+ + T ++
Sbjct: 362 HLSQNSTFVEITSINNEILFKGQSEGGKVTMTY 394
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 60.5 bits (140), Expect = 6e-08
Identities = 32/157 (20%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = +2
Query: 248 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY-RCDRNISMGMNLG 424
+++A+ L+ ++ +G++L+A+D S ++V L + FD+Y +++I++G+N
Sbjct: 64 IMDAVAVLVEESALTVTKDGVKLRALDPSRTAMVDLYMPRTAFDEYPDVEQDINIGVNFS 123
Query: 425 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 604
+ KIL+ AG +VT + ++N+ + + + ++ L+++ +E L P+ +
Sbjct: 124 EVKKILQRAGKGSSVTFEVEENSLKIRM-----SGKVTRTIKLPLIDIPVEQLPTPKVIF 178
Query: 605 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSR 715
+ T ++ S + +D+ ++ ++G+ R
Sbjct: 179 TVTAKLASDALRQAVKDVEVIADAAKFEGKEDGLYIR 215
>UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-132
- Ectocarpus siliculosus virus 1
Length = 301
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Frame = +2
Query: 242 KKVLEAIKDLLTQATFD-CDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 418
K ++E +K+LL + D + GI+L ++D V+++ L + + + + ++ G+N
Sbjct: 62 KSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVV--NNIESFYAKGTVTAGLN 119
Query: 419 LGSMSKILKCAGDKDTVTIKA-QDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE 595
+ + K+++ D + + +D + + + + +KL++LD E + IP+
Sbjct: 120 VVVLYKMIRSMTSNDFMEWRIYEDEPHQMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQ 179
Query: 596 TEYSCTIRMPSSEFARICRDLSQFGESMVISCTK 697
E+ + MPSSE ++ R++ + I T+
Sbjct: 180 VEFDRVVSMPSSELSKHVREMVTVSPFISIRATR 213
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 245 KVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLG 424
++++ L+ +A F ++GI ++AMD S V L+ L L + F KY ++G+N+
Sbjct: 15 QLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNMD 74
Query: 425 SMSKILKCAGDKDTVTI-KAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHL 583
+ KILK KDT+ + K ++N +T + +V +++ M +DL L
Sbjct: 75 HLKKILKRGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDLPEL 128
>UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1;
Thermofilum pendens Hrk 5|Rep: DNA polymerase sliding
clamp - Thermofilum pendens (strain Hrk 5)
Length = 247
Score = 55.6 bits (128), Expect = 2e-06
Identities = 33/155 (21%), Positives = 75/155 (48%)
Frame = +2
Query: 242 KKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNL 421
K ++E++ ++ +A F G++L+A+D +++V L + ++ F++Y D+ + L
Sbjct: 13 KYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEYSVDQETKISAVL 72
Query: 422 GSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE 601
+ K+LK A D ++ + +T S E+ ++ L+++ + L P+
Sbjct: 73 DDIDKVLKRAKSDDKISFEVSQGRLIITL---SGRAER--RFKFPLIDIAGQELPSPKLN 127
Query: 602 YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
++ +M S F +D S ES+ + E +
Sbjct: 128 FTVAAKMLSDTFRDALKDASLVSESVKLKAEDESL 162
>UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1;
Archaeoglobus fulgidus|Rep: DNA polymerase sliding clamp
- Archaeoglobus fulgidus
Length = 245
Score = 55.2 bits (127), Expect = 2e-06
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Frame = +2
Query: 221 LLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRN 400
++ +LK V AI L+++A + G+ +A+D ++V++V + + D F+ Y D
Sbjct: 5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEE 64
Query: 401 ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEH 580
++G+++ + I K KD V + +D ES + K E K+ +D
Sbjct: 65 KTIGVDMDRIFDISKSISTKDLVELIVED---------ESTLKVKFGSVEYKVALIDPSA 115
Query: 581 LG----IPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+ IPE E I M + EF + + + ++ KEG +
Sbjct: 116 IRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEGFR 162
>UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6;
Sulfolobaceae|Rep: DNA polymerase sliding clamp 1 -
Sulfolobus acidocaldarius
Length = 247
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Frame = +2
Query: 239 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 418
LK ++E + + + F+ +GI+L A+D +HVSL+++ L + F +Y + G N
Sbjct: 11 LKNIVETLTKFIDEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFN 70
Query: 419 LGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESP-------NQEKVSDYEMKLMNLDLE 577
++KIL A K+ ++I++ D+ + V N +VS E+ +NL+ E
Sbjct: 71 SQYLAKILSIAKRKEEISIES-DSPERVKITLGGALNRVFIINNIQVSPPEVPEVNLEFE 129
>UniRef50_Q64803 Cluster: 20.6 kDa protein; n=1; Autographa
californica nucleopolyhedrovirus|Rep: 20.6 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 187
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -3
Query: 393 SQRYLSKPSARRVSDTRDT*ELSIACN*IPLSSQSKVACVSRSLIASSTFFKIELRSKRA 214
S Y KPSA +DT T E+SI C P SQSKVAC SRSL S++ FK A
Sbjct: 10 SHLYFLKPSACSCNDTSATCEVSITCMLTPRLSQSKVACGSRSLKVSTSLFKTAPVLNSA 69
Query: 213 SNMF 202
SN+F
Sbjct: 70 SNIF 73
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 53.6 bits (123), Expect = 7e-06
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Frame = +2
Query: 248 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 427
+L+AI ++ + NG++ A+D +HV+L+ + L + F +Y + + +G N+ +
Sbjct: 17 MLDAISKIVDELAMTITPNGVKAIALDPAHVALMVMELPPESFIEYEVEDEVKLGFNVAN 76
Query: 428 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPET--E 601
++KI+K D + I+ + D VT+ ++ +L+NLD+ +PE E
Sbjct: 77 IAKIIKRGKKGDKLDIEVDE--DRVTWSIVGATIKR-----YRLLNLDVPVPELPEAELE 129
Query: 602 YSCTIRMPSSEFARICRDLSQFGESM 679
+ + + F +D G+++
Sbjct: 130 FKVHVSLIVDPFKNALKDAEAVGDTV 155
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/153 (20%), Positives = 74/153 (48%)
Frame = +2
Query: 251 LEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSM 430
+ AI ++ + + +NGI+L+A+D S + +V + +G +Y D+ ++G+N+ +
Sbjct: 15 MNAIGKIIDEGAYKIQENGIRLRAIDPSRIVMVDFYIPREGLLEYEFDKEETIGVNMEDL 74
Query: 431 SKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSC 610
+KIL+ A D + ++ + A + +F ++ + +L L IP ++
Sbjct: 75 TKILRRAVKGDELELRTLE-AGRLAVIFLGRGTRMFIIPSLETIAEELPELKIP---FTV 130
Query: 611 TIRMPSSEFARICRDLSQFGESMVISCTKEGVK 709
+M S F + ++L +++ K+ K
Sbjct: 131 KAKMLPSTFRDVVKELEPISDAIEFRAIKDEQK 163
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 51.2 bits (117), Expect = 4e-05
Identities = 31/176 (17%), Positives = 85/176 (48%)
Frame = +2
Query: 239 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMN 418
LK++ + + ++++A F D+NG+ + A+D +HV+++ L + + F ++ D + ++
Sbjct: 11 LKEITDLLSTIVSEAKFRVDENGMSVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIALD 70
Query: 419 LGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPET 598
+ + +++ A + V I + + + F + N+ ++ + ++ +
Sbjct: 71 IDRLKSVIRLASSSENVGI--TKDGEKLKFELGTINKSISLLDPSTIVTPKIPNI---TS 125
Query: 599 EYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKSRQQATSAQRTSSWPRPLL 766
EY ++ S+F R R +S+ + +++G K+ + S + P+ L+
Sbjct: 126 EYYAVLK--KSDFERGLRAAEDISDSIRFTLSQDGFKAYSHSESEESEMILPKDLI 179
>UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp
subunit A; n=1; Ignicoccus hospitalis KIN4/I|Rep: DNA
polymerase sliding clamp subunit A - Ignicoccus
hospitalis KIN4/I
Length = 248
Score = 50.8 bits (116), Expect = 5e-05
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Frame = +2
Query: 230 SSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISM 409
+ I + +++AI ++ + G++++A+D + V ++ + + AD F +Y + S+
Sbjct: 8 AKIFQSLVDAIGKIVDEVALVAKPEGVEMKAIDPAQVVMIRIYIPADAFSEYEVEEEESL 67
Query: 410 GMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES--------PNQEKVSDYEMKLMN 565
G N+G + K K A + + ++ + V E PN E VS+ L N
Sbjct: 68 GFNIGDILKFFKRAKKGYKLELGSEAEGSKIRIVLEGALIKKYVIPNLEVVSEELPDLSN 127
Query: 566 LDLE 577
LD +
Sbjct: 128 LDFK 131
>UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B2 -
Aeropyrum pernix
Length = 249
Score = 50.0 bits (114), Expect = 8e-05
Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = +2
Query: 248 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC-DRNISMGMNLG 424
++ +I+ ++ + F G+ L+A+D SHV++V L F +Y ++ G++
Sbjct: 17 MVASIEKIIEEGVFVATGEGLSLRALDTSHVAMVDLYYPNTAFIEYDIGGESVEFGVSFD 76
Query: 425 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEY 604
+SK+L+ A +D + ++ + + +S + + + + + E L P+ +
Sbjct: 77 LLSKVLRRARKEDELVLEVE--GSRLAVKLKSRGER---TFRIPQVVMTYEKLPEPKVSF 131
Query: 605 SCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
+ RM S F RDL E++ + ++ +
Sbjct: 132 TVRARMLGSTFREAVRDLEPHSETLTLRALEDAL 165
>UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBR089W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 199
Score = 49.2 bits (112), Expect = 1e-04
Identities = 53/170 (31%), Positives = 68/170 (40%)
Frame = -3
Query: 711 DFTPSFVHEITIDSPNCERSRQILANSELGMRIVQLYSVSGIPKCXXXXXXXXXXXXXXX 532
+F S V I I+S N ++SR IL NSE G V+ Y S I K
Sbjct: 27 NFIVSLVIMILIESLNWDKSRTILENSEDGNDRVESYCNSSIFKKSASISINFREYSAIR 86
Query: 531 XXFGLSKTNVTLSALSCAFIVTVSLSPAHLRIFDMLPRFMPIEMFLSQRYLSKPSARRVS 352
S + S + A V VS+ RI R +P S Y K S
Sbjct: 87 SFLVSSNNKMMESGVLSAISVNVSVLLPQRRILLSEVRSIPNVTGWSHLYSWKASTPISK 146
Query: 351 DTRDT*ELSIACN*IPLSSQSKVACVSRSLIASSTFFKIELRSKRASNMF 202
+T T E S AC IP S K+ ++SL S K + S ASN+F
Sbjct: 147 ETNRTLESSTACAMIPSSLHWKLTNWTQSLKPSIILLKRDASSNFASNIF 196
>UniRef50_Q5UQH4 Cluster: Uncharacterized protein L823; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L823 - Mimivirus
Length = 323
Score = 48.8 bits (111), Expect = 2e-04
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Frame = +2
Query: 203 NMFEARLLRSSILKKVLEAIKDLLTQATF---DCDDNG--IQLQAMDNSHVSLVSLTLRA 367
N+ E + +LKK+L I ++ ++ F + ++ G I + DN + L+ L L+
Sbjct: 68 NILEIVTTKIDVLKKILRLIGEVTSECQFSFQNVNEGGRIIVTELHDNKTI-LLKLVLKG 126
Query: 368 DGFDKYRCDRN-ISMGMNLGSMSKILKCAGDKDT----VTIKAQDNADNVTFVFESPNQE 532
GFD Y+C ++ I+ + L + + L G DT + I + + + F+ N
Sbjct: 127 TGFDFYKCSKSKITARLYLPDIDEALGLIGVDDTNTNPIIISMKKDKETSIFITRIDNSG 186
Query: 533 KVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
E+ ++ +P+T + I + + +F +IC + + + IS T + V
Sbjct: 187 FTEQVELPCRESVGLNIPLPKTTFQGKIVINAEKFRKICERICSVSDLIKISLTDKEV 244
>UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4;
Pyrobaculum|Rep: DNA polymerase sliding clamp A -
Pyrobaculum aerophilum
Length = 249
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/153 (18%), Positives = 71/153 (46%)
Frame = +2
Query: 248 VLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGS 427
++++I L+ +A F ++G+ L+A+D S ++V L + + F+++ + G+N
Sbjct: 17 IIDSISVLVEEANFLIRNDGLYLRALDVSRTAMVDLAIPKESFEEFPEVEELRFGLNFKE 76
Query: 428 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYS 607
+ K+L+ D ++++ ++ + + +S V E+ E L P+ Y+
Sbjct: 77 LKKLLRRVKKGDKISMEFEEGRVRIKLIGKSVRSIVVPSIEVV-----GEELPTPKVVYT 131
Query: 608 CTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
++ S A +D + + ++E +
Sbjct: 132 AMVKAASDVLATAVKDADAVADEVKFEASEEAL 164
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 46.0 bits (104), Expect = 0.001
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 239 LKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRC--DRNISMG 412
LKK++ + DL+++ F + GI+L AMD + +++V ++ + F Y D+ I +
Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDYTIEGDKEI-IT 69
Query: 413 MNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 592
+++ + I+K ++ V + D N + +K + + L+ + IP
Sbjct: 70 VSMDDLKTIVKKLKQREMV-VWETDREKNKLKILARGTIKKT--FSIPLLEGEETETPIP 126
Query: 593 ETEYSCTIRMPSSEFARICRDLSQFGESM 679
EY+ + + S I D S +S+
Sbjct: 127 SLEYNNVVELDSKAIKEIIDDASAIADSL 155
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 45.6 bits (103), Expect = 0.002
Identities = 33/161 (20%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Frame = +2
Query: 209 FEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYR 388
F A + K A ++ +A +NGI +AMD SH+++ L + + FD+Y
Sbjct: 4 FRAYQEEARYFKYAFNAAGKVVEEAPLIVTENGIVSRAMDASHIAMAVLEMPWEMFDEYE 63
Query: 389 CDRN-ISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
+ + G+++ +++I++ A D +T++ +D + V S E+ E +L +
Sbjct: 64 PPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDE-EEVIIKLGSSGYER----EFRLRS 118
Query: 566 LDLEHL-GIPETEYSCTIRMPSSEFARICRDLSQFGESMVI 685
+D++ + PE +++ + + RD +++ +
Sbjct: 119 IDIDDIPDEPELDFAVEVTVVPDFIQDAVRDADLVSDTVKV 159
>UniRef50_A4YCS6 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 247
Score = 39.9 bits (89), Expect = 0.088
Identities = 33/167 (19%), Positives = 69/167 (41%)
Frame = +2
Query: 206 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 385
MF A S ++ +I + + T + + GI + + + V + + + D ++Y
Sbjct: 1 MFRAIYGSSRDFYYIVSSISKISDELTLNFTEEGIGSKYLTDDKVMMGVVEIGKDALEEY 60
Query: 386 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 565
++ IS+ +NLG + KIL + +V I + ++ E S +K
Sbjct: 61 SIEKPISVKLNLGELKKILSKMKGRSSVEITETNEGIRISMKDEKTGTR--SSLSIKAEK 118
Query: 566 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 706
+ + L P +S T+ + + + + Q GE + I + V
Sbjct: 119 GEPQILKEPSVAHSVTMGIGGDILSILVDESMQVGEEVEIKAEDDHV 165
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 368 DGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFV-FESPNQEKVSD 544
D F K+R +N+ +++G C D + +K ++ N+T + F + NQEK+S
Sbjct: 59 DSFSKFRGFKNV---LDIG-------CGAGSDLLVVKKYNDKANLTGIDFGNWNQEKLSK 108
Query: 545 YEMKLMNLDLEHLGIP 592
+ L+NLD+E +P
Sbjct: 109 NNINLINLDIEKDKLP 124
>UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 169
Score = 35.5 bits (78), Expect = 1.9
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +2
Query: 341 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES 520
S++ L +RA GF ++ + N M+ ++ GD + K++D N+T+V
Sbjct: 3 SVLRLAMRAKGFSRFLAETQAFPVKNRHFMTSSVRKTGDFEYEDPKSEDEVVNITYVLRD 62
Query: 521 PNQE----KVSDYEMKLMN-LDLEHLGIPETEYSCT 613
+ KV D M L + D+E G E +C+
Sbjct: 63 GTERKIRGKVGDNVMFLAHRYDIEMEGACEASLACS 98
>UniRef50_Q7D6X4 Cluster: Substrate--CoA ligase, putative; n=13;
Actinomycetales|Rep: Substrate--CoA ligase, putative -
Mycobacterium tuberculosis
Length = 1168
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 398 SYRSGTCQSHQLGE*VTRETHESCP*PVTEFHC 300
SY +G S GE + RE HE C PVT F C
Sbjct: 941 SYANGYANSKWAGEVLLREAHEQCGLPVTVFRC 973
>UniRef50_A7C6V8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 161
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 230 SSILKKVLEAIKDLLTQA--TFDCDDNGIQLQAMDNSHVSLVSLTLRAD 370
S L+K+ ++DLLTQA T D + + L A++ + SL SLT + D
Sbjct: 53 SETLQKLTAKVRDLLTQALPTHDMEALSVSLDALEPTQTSLSSLTAQID 101
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 34.3 bits (75), Expect = 4.4
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -3
Query: 303 LSSQSKVACVSRSLIASSTFFKIELRSKRASNM 205
+ S SK+A V+RSL S TF +I KRASNM
Sbjct: 59 VGSASKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 898
Score = 34.3 bits (75), Expect = 4.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 425 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYE 550
S+ LK G DT+ K+ DNA+NV F+ Q ++D E
Sbjct: 855 SIYNTLKTKGKVDTLYFKSYDNAENVAFLMRQSKQRILADVE 896
>UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5;
Methanosarcina|Rep: Geranylgeranyl reductase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 402
Score = 33.9 bits (74), Expect = 5.8
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 347 VSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPN 526
++L + FD + D+ G+++ S K+L C ++ V ++ N FV +
Sbjct: 99 IALLVSRKAFDNFLLDKARETGIDIHSGEKVLDCEEGEECVEVRTSQNTYLAKFVLIAEG 158
Query: 527 QEKVSDYEMK 556
E V Y ++
Sbjct: 159 SEGVLKYSVR 168
>UniRef50_Q1V1F8 Cluster: Putative uncharacterized protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative
uncharacterized protein - Candidatus Pelagibacter ubique
HTCC1002
Length = 197
Score = 33.5 bits (73), Expect = 7.7
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 431 SKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSC 610
++I+K + D A+ A +V F+ N +++S ++ ++L GI EY+
Sbjct: 124 NEIVKAVPEADVDRTSAEGKASSVQFIHFKLNDDQISKFKSDSATIEL---GIDHKEYTH 180
Query: 611 TIRMPSSEFARICRD 655
T ++ + +C D
Sbjct: 181 TTKLSENSIKSLCDD 195
>UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subunit;
n=1; Thermococcus kodakarensis KOD1|Rep: Oligosaccharyl
transferase, STT3 subunit - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 1000
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 497 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 634
N T +FE+ N ++ D ++ + NL+++HL ET T+++P +E
Sbjct: 804 NGTLIFEAYNGTELVDRQVLVKNLNIDHLN--ETPVEVTVKIPQAE 847
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,937,540
Number of Sequences: 1657284
Number of extensions: 14876872
Number of successful extensions: 34431
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 33207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34405
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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