Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O22
(913 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 42 7e-04
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 40 0.004
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.026
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.18
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.24
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 33 0.32
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.32
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 32 0.56
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 32 0.74
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 32 0.74
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 31 0.98
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 31 0.98
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 1.3
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 31 1.7
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 2.3
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 3.0
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 5.2
SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 29 5.2
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 6.9
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 9.1
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 28 9.1
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 28 9.1
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P P PPP P PPP P PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P P PPP P PPP P PP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P PPPP P P P PPP P PPP P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPP P P P PPP P PPP P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P P PPPP P P P PPP P PPP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PP P P P P PPP P PPP P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLK 697
P P P + PPPP P P P PPP P PPP P L+
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPP----PPPPPPPPPAPPPPPPPPPPPPPALR 435
Score = 36.7 bits (81), Expect = 0.026
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 527 GXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
G P P PPPP P P P PPP P PPP P
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 35.9 bits (79), Expect = 0.045
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 525 GXXXQXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPPXXPP 686
G PP PP PPP PP P PPP PP PP
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 35.1 bits (77), Expect = 0.079
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PP P P P PPP P PPP P PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P P PPP P PPP A + PP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPP-----PPAPPPPPP-----PPPPPPPALRLACAPP 441
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +2
Query: 527 GXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
G P P PPPP G P P + P PPP P PPP + + PP
Sbjct: 284 GIQPPPPPSRGAAPPPPSRGAPPPPPSRGSAP---PPPPARMGTAPPPPPPSRSSQRPPP 340
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P + PPPP G P P P PP P PPP P PP
Sbjct: 328 PPPPSRSSQRPPPPSRGAPPP-------PSMGMAPPPVGGAAPPPPPPPPVGGPPPP 377
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 554 PXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP 676
P PPPP G P P P++ PP P PPP
Sbjct: 363 PPPPPPPPVGGPPPPPP-----PIEGRPPSSLGNPPPPPPP 398
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +2
Query: 545 PXXPXK-XPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP---XAPKXLKXPP 706
P P + PPPP G P P PPP P PPP P L PP
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPP--PPPPPPVGGPPPPPPPIEGRPPSSLGNPP 393
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPP----PXAPK 688
RG P P PPPP G P PPP P PP P P
Sbjct: 293 RGAAPP--PPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPS 350
Query: 689 XLKXPP 706
PP
Sbjct: 351 MGMAPP 356
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXP------XPPPXA 682
RG P P PPPP P + P + PPP P PPP
Sbjct: 311 RGSAPPPPPARMGTAPPPPP---PSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPP 367
Query: 683 PKXLKXPP 706
P + PP
Sbjct: 368 PPPVGGPP 375
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 522 GGXXXQXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPP 674
GG PP PP PPP PP P + PPP PP
Sbjct: 359 GGAAPPPPPPPPVGGPPP----PPPPIEGRPPSSLGNPPPPPPPGRGAPPP 405
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 524 GGXXPKXPXXPX--KXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
GG P P P PPPP G P PL PPP P PPP P
Sbjct: 938 GGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLP--PPPGGSAPPPPPPPPPP 991
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 522 GGXXXQXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPP 641
GG PP P PPP PP P PPP
Sbjct: 949 GGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPK 688
GG P P P PPP G P P PPP P PPP K
Sbjct: 949 GGNAPPPPPPPGGSAPPPGGGAP-PLPPPPGGSAPPPPPPP-----PPPPPPMRK 997
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP 676
PPPP P P PPP P PPP
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPP 959
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 492 PPXXXFXXKKGGXXXQXPPXPPKKXPPPXXXGPPXP 599
PP GG PP P PPP PP P
Sbjct: 957 PPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 36.3 bits (80), Expect = 0.034
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P P PP P PPP AP PP
Sbjct: 170 PNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYP-PPPNAPNPPYPPP 225
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXP-XPPPXAPKXLKXPP 706
P P PPP P P P PPP P PPP AP PP
Sbjct: 182 PPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236
Score = 32.7 bits (71), Expect = 0.42
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P PPP P P P PPP + PPP AP
Sbjct: 127 PPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAP 173
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXP-XPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P P PPPP P P + P P P PPP AP
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAP 202
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +2
Query: 536 PKXPXXPXK-XPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPP-PXAPKXLKXPP 706
P P P PPPP P P P PP P PP P P L PP
Sbjct: 106 PPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPP 164
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P PPPP P P P PP P PP P PP
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPK 688
P P PPPP P P P PPP P PPP P+
Sbjct: 194 PYPPPPNAPNPPPPNPPYPPPPNA----PNPPYPPPPNAPNPPYPPPPNPQ 240
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
P P PP P P P PL PP P PPP P P
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPP 186
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPP P + P P P P PPP P PP
Sbjct: 114 PPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPP-PPNPPYPPPLYPPPPNPPP 169
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P PPPP P P P PPP P P P P PP
Sbjct: 139 PYPPSPNAPYPPPPNPPYPPP-----LYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP 190
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 PKXPXXPXKXPP-PPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P P PP PP P P P PP P PPP AP
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYP-PPPNAP 139
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXP-XPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PP P P P P PPP + P P P PP
Sbjct: 141 PPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.10
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXP---XPPPXAPKX 691
+GG P+ P P PPP P + P + PPP F P PPP P+
Sbjct: 447 QGGGPPQLP--PNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPP--PRG 502
Query: 692 LKXPP 706
+ PP
Sbjct: 503 MPPPP 507
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +3
Query: 522 GGXXXQXPPX----PPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPP 674
GG PP PP + PP GPP P + PPP + PP
Sbjct: 463 GGMRGMPPPPMGMYPPPRGFPPPPFGPPPPFYRGPPPPRGMPPPPRQRMPSQGPP 517
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 524 GGXXPKXPXXPXKX-PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
GG P P P PPPP P PL PP P PPP P
Sbjct: 149 GGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPP 203
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P+ P P + P PP P P P P P PPP AP PP
Sbjct: 114 PRAPETPSQAPSPP----PPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPP 166
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = +1
Query: 493 PPXXXFXKKKGGXXPKXPXXPXK--XTPPPXXGXPXXLXXKXXFXXKXXPPPXFXKKXPX 666
PP GG P P P PPP + PPP P
Sbjct: 139 PPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPP 198
Query: 667 PPPXXP 684
PPP P
Sbjct: 199 PPPPPP 204
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 546 PXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPP 641
P PP PPP PP P PPP
Sbjct: 188 PPPPSGGPPPPPPPPPPPPPPPILELAAPPPP 219
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
GG P P P P P P P PPP P PPP + P
Sbjct: 162 GGPPPPPPIAPAATVPAPAV----PLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAPP 217
Query: 704 P 706
P
Sbjct: 218 P 218
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 537 QXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPPXXPPXF*XPP 704
+ PP PP PP GPP P F P PP PP F PP
Sbjct: 27 ETPPPPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPP-GPPGFQGPP 81
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P+ P P P P P P + P + PPP + P PPP P + P
Sbjct: 1044 PRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQ--PVPPPRQPDPIPTNP 1098
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPP-PXFXKXXPXPPPXAPKXLKXP 703
P+ P P P PP P P + P + P P PPP PK P
Sbjct: 1059 PRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTPAP 1115
Score = 31.9 bits (69), Expect = 0.74
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +2
Query: 515 KKRGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXL 694
K++ P P + P PP P P P K PPP P PP
Sbjct: 1030 KRKASPPSAQPLPPPRKPSPPPSAVPIP------PPRKPSPPPSEPAPPPRQPPPPSTSQ 1083
Query: 695 KXPP 706
PP
Sbjct: 1084 PVPP 1087
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P K P P P K P P P K P P AP + PP
Sbjct: 1022 PTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPP 1078
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P + P PP P P K PPP P PPP P
Sbjct: 1019 PPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPP---SAVPIPPPRKP 1062
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP 676
P+ P P P P P P P + PPP K P P P
Sbjct: 1073 PRQPPPPSTSQPVPPPRQPDPIPTNPAHPTE--PPPRQPKPTPAPRP 1117
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 536 PKXPXXPXKXP--PPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P P PPP P P PPP P P AP+ PP
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXL 694
P P PPPP P PL PPP + P PPP P L
Sbjct: 65 PPPPAAAPAAPPPPAAPPAAPPPP---PPLPAPPPPP-AQPAPQPPPAPPHFL 113
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P + PPP PPP AP P
Sbjct: 465 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPPG-APHPRVPPPGAPHPRVPP 523
Query: 704 P 706
P
Sbjct: 524 P 524
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P PPP PPP AP P
Sbjct: 545 GAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPG-TPHPRVPPPGAPHPKVPP 603
Query: 704 P 706
P
Sbjct: 604 P 604
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P PPP PPP AP P
Sbjct: 435 GAPHPRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHPRVPP 493
Query: 704 P 706
P
Sbjct: 494 P 494
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P PPP PPP AP P
Sbjct: 455 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPG-APHQRVPPPGAPHPRVPP 513
Query: 704 P 706
P
Sbjct: 514 P 514
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P PPP PPP AP P
Sbjct: 425 GAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHPRVPP 483
Query: 704 P 706
P
Sbjct: 484 P 484
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P + PPP G P P P PPP PPP AP PP
Sbjct: 494 PGAPHQRVPPP--GAPHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHPRVPPP 544
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P PPP G P P P PPP PPP AP PP
Sbjct: 504 PGAPHPRVPPP--GAPHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHPRVPPP 554
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P+ P P P G P P P PPP PPP A P
Sbjct: 505 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPG-APHPRVPPPGASHPRVPP 563
Query: 704 P 706
P
Sbjct: 564 P 564
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
PPPP P F P PPP P PPP L PP
Sbjct: 283 PPPPPSNTPGMFASSGFQP---PPPPPTDFAPPPPPPEPTSELPPPP 326
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +3
Query: 537 QXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPPXXPPXF*XPP 704
Q PP PP+ PPP PP P PPP + P PP PP
Sbjct: 203 QPPPPPPR--PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPP 256
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P + P PP P PPP PP
Sbjct: 206 PPPPRPPPSPPPPPP--PPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPP 260
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXL 694
G P P + PPPP P P P P P + P PPP P+ L
Sbjct: 191 GTSHPTSPSQITQPPPPPPRPPPSP------PPPPPPPSPSPPRPPPPPPPSPPRPL 241
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPP-PXAPKXLKXPP 706
P P PP P P P P + PPP P PP P A K + PP
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPP-----PPSPPRPLAAKLPEPPP 250
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPPXFXKKXXLXPP 674
PP PP PP PP + PPP L PP
Sbjct: 218 PPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPP 261
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
G P P PPPP P P P PPP P PPP P
Sbjct: 343 GVNPPPPPTNNPPSPPPPTNNTPPPPP-----PTNKPPPPPPPTNGPPPPPPPTNGPPPP 397
Query: 704 P 706
P
Sbjct: 398 P 398
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 536 PKXPXXPXKX--PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P P PPPP P P P PPP P PPP PP
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPP----PPTNGPPPPPPPTNGPPPPPPPTNGPPPPP 408
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 536 PKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
P P PPPP P P P PPP P PPP PP
Sbjct: 357 PPPPTNNTPPPPPPTNKPPPPPPPTNGPP----PPPPPTNGPPPPPPPTNGPPPPPP 409
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 32.3 bits (70), Expect = 0.56
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 537 QXPPXPPKKXPPPXXXGPPXPXXKKXFXX*XXPPP 641
Q PP PP PPP PP P F PPP
Sbjct: 462 QAPPPPPPPPPPPPPPPPPPPPPPPPFP--PPPPP 494
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 525 GXXXQXPPXPPKKXPPPXXXGPPXP 599
G PP PP PPP PP P
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPP 483
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 525 GXXXQXPPXPPKKXPPPXXXGPPXP 599
G PP PP PPP PP P
Sbjct: 461 GQAPPPPPPPPPPPPPPPPPPPPPP 485
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXL 694
PPPP P P P PPP F P PPP P L
Sbjct: 464 PPPPPPPPPPPPPPP---PPPPPPPPPF----PPPPPPTPLHL 499
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 634 PPPXFXKKXPXPPPXXPQXFKXPP 705
PPP P PPP P F PP
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPPPP 492
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
PPPP G P P PPP P PPP P + P
Sbjct: 282 PPPPLTGGMLPPPFGG-HPAAAPPPPPLPAGVPAPPPPPPPPMLGGP 327
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFX-----PLKXXPPPXFXKXXPXPPPXAP 685
RGG K P PPPP P P K PPP + PPP P
Sbjct: 152 RGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPP--P 209
Query: 686 KXLKXPP 706
+ PP
Sbjct: 210 ERSSGPP 216
Score = 31.5 bits (68), Expect = 0.98
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXP----XPPPXAPK 688
RG P P P PP P P + PL PPP + P PPP P
Sbjct: 336 RGQIAPPPP--PISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPP 393
Query: 689 XLKXP 703
+ P
Sbjct: 394 AMDKP 398
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPX-APKXLKXPP 706
PPPP G P P PP + P PPP AP+ L PP
Sbjct: 331 PPPPLRGQIAPP------PPPISKPPTSTRSAPPPPPGRAPQPLGGPP 372
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKX 700
RG P P PPPP G P P + P F P PP +
Sbjct: 255 RGPTSGGEPPPPKNAPPPPKRGSSNPPP----PPTRGPPSNSFTTQGPPLPPSRDQAPAP 310
Query: 701 PP 706
PP
Sbjct: 311 PP 312
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Frame = +3
Query: 492 PPXXXFXXKKGGXXXQXPPXPPKK-----XPPPXXXGPPXPXXKKXFXX*XXPPPXFXKK 656
PP Q PP PP + PPP PP P + PPP +
Sbjct: 281 PPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQV--PLPPPPL--R 336
Query: 657 XXLXPPXXPPXF*XPP 704
+ PP PP PP
Sbjct: 337 GQIAPP--PPPISKPP 350
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFX-----PLKXXPPPXFXKXXPXPPPXAP 685
RGG K P PPPP P P K PPP + PPP P
Sbjct: 64 RGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPP--P 121
Query: 686 KXLKXPP 706
+ PP
Sbjct: 122 ERSSGPP 128
Score = 31.5 bits (68), Expect = 0.98
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXP----XPPPXAPK 688
RG P P P PP P P + PL PPP + P PPP P
Sbjct: 248 RGQIAPPPP--PISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPP 305
Query: 689 XLKXP 703
+ P
Sbjct: 306 AMDKP 310
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPX-APKXLKXPP 706
PPPP G P P PP + P PPP AP+ L PP
Sbjct: 243 PPPPLRGQIAPP------PPPISKPPTSTRSAPPPPPGRAPQPLGGPP 284
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +2
Query: 521 RGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKX 700
RG P P PPPP G P P + P F P PP +
Sbjct: 167 RGPTSGGEPPPPKNAPPPPKRGSSNPPP----PPTRGPPSNSFTTQGPPLPPSRDQAPAP 222
Query: 701 PP 706
PP
Sbjct: 223 PP 224
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Frame = +3
Query: 492 PPXXXFXXKKGGXXXQXPPXPPKK-----XPPPXXXGPPXPXXKKXFXX*XXPPPXFXKK 656
PP Q PP PP + PPP PP P + PPP +
Sbjct: 193 PPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQV--PLPPPPL--R 248
Query: 657 XXLXPPXXPPXF*XPP 704
+ PP PP PP
Sbjct: 249 GQIAPP--PPPISKPP 262
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG G GG G GGG G G G GGGG G G G
Sbjct: 63 GGGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATG 119
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -1
Query: 703 GGF*XFGGXXGGXRXXFXKXXGGGXF*XXKXFXXXGXGGPXXXGGGXFXGGXGG 542
GG+ G GG R GGG + G GG GGG GG GG
Sbjct: 130 GGYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGG 183
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKX-GGGXXFXGKXXFXXXGXGXPXXG--GGGXFXGXXGXFG 535
GG ++ G GG G + + GGG G G G G GGG + G G +G
Sbjct: 145 GGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYG 204
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 703 GGF*XFGGXXGGXRXXFXKXXGGGXF*XXKXFXXXGXGGPXXXGGGXFXGGXGG 542
GG GG GG GGG + G GG GGG + GG G
Sbjct: 172 GGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGGGGYGGGGYGGGRSG 225
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG ++ G GGG G GGG G G G GGGG G G
Sbjct: 158 GGGYRGRGRGGGGYGG--GGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGGG 212
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/49 (42%), Positives = 21/49 (42%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXF 559
GG F G GGG G F GGG F G G G GGGG F
Sbjct: 84 GGGFGGGGGFGGGGGGGFG-GGGGGGFGG----GGGGGGGFGGGGGGGF 127
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -2
Query: 687 LGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
+G GGG G GGG G G G GGGG G G FG
Sbjct: 80 VGGRGGGFGGGGGFGGGGGGGFGGG--GGGGFGGGGGGGGGFGGGGGGGFG 128
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = -1
Query: 703 GGF*XFGGXXGGXRXXFXKXXGGGXF*XXKXFXXXGXGGPXXXGGGXFXGGXGGF 539
GGF GG GG F GGG GG GGG GG GGF
Sbjct: 85 GGFGGGGGFGGGGGGGFGGGGGGGF------------GGGGGGGGGFGGGGGGGF 127
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
PPPP P P F P PPP PPP P
Sbjct: 362 PPPPIIPIPPPAMPAMFNP--HVPPPMIGPVTVPPPPLIP 399
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +2
Query: 554 PXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXP 703
P + P PP G P P PL+ PP P PPP P + P
Sbjct: 1330 PWELPLPPS-GLPLPLPRLPLPPLRLPPP---HSRLPLPPPKLPPPSRIP 1375
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 554 PXKXPPPPXXGXPXPXXXKXF-XPLKXXPPPXFXKXXPXPPP 676
P + PPPP G P P PPP + P PPP
Sbjct: 550 PSEEPPPPPPGVDIPPPLPPSEDPKPPPPPPEPPEECPPPPP 591
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG G GG G GGG G G G GGGG G G G
Sbjct: 248 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATG 304
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG G GG G GGG G G G GGGG G G G
Sbjct: 255 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATG 311
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG G GG G GGG G G G GGGG G G G
Sbjct: 297 GGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATG 353
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -2
Query: 684 GAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GA GGG G GGG G G G GGGG G G G
Sbjct: 245 GATGGGGGA----TGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATG 290
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXG 544
GG G GG G GGG G G G GGGG G G
Sbjct: 304 GGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGG 357
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 684 GAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
G GG G GGG G G G GGGG G G G
Sbjct: 318 GGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGGPGSGGCGEDG 367
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP 676
GG P P P P P P P PPP P PPP
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
PPPP P P PPP P PP P PP
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPP 741
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
PPPP P P P P P P PPP P PP
Sbjct: 712 PPPPP---PPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPP 755
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 684 GAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
G GGG G GGG G G G GGGG G G G
Sbjct: 785 GGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGG 834
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -2
Query: 705 GGXFKXLGAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
GG G GGG G + GG G G G GGGG G G G
Sbjct: 813 GGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGG 869
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -2
Query: 684 GAXGGGXGXFFXKXGGGXXFXGKXXFXXXGXGXPXXGGGGXFXGXXGXFG 535
G GGG G GGG + G GGGG G G +G
Sbjct: 782 GGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYG 831
>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
Length = 288
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXA 682
PPPP G P P P+ PPP PPP A
Sbjct: 218 PPPPTTGAPPP------TPVTNKPPPPRPATTQAPPPTA 250
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 1158 PPPPPPPPPPPSSPSPPPP 1176
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPP 676
PPPP P P P PPP P PPP
Sbjct: 951 PPPPTSALPPPI------PATQVPPPPLPPLPPPPPP 981
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 545 PXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAP 685
P P PPPP P P P PP P P +P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSP 729
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 683 PPPPPPPPPPPPPPPPPPP 701
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 685 PPPPPPPPPPPPPPPPPQP 703
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 691 PPPPPPPPPPPQPSTPPPP 709
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +2
Query: 524 GGXXPKXPXXPXKXPP--PPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLK 697
GG P P P PP G P + P PPP PPP +
Sbjct: 20 GGYPPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIG 79
Query: 698 XPP 706
PP
Sbjct: 80 GPP 82
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 566 PPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
PPPP P P PPP PPP P PP
Sbjct: 307 PPPPAASEPAAFAPAP--PPSQAPPPPKTIPSTLPPPPVPSATSAPP 351
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 6.9
Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +1
Query: 634 PPPXFXKKXPXPPPXXPQXFKXPPXXXXXXXXXXXXXXXXGGFFFXXPPPNXGXXXXXXX 813
PPP + PPP Q + PP GG PPP G
Sbjct: 504 PPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGG---GPPPPGAGQGWGQPP 560
Query: 814 XXXQKKXGGGPXXP*XKK--XPXXXGGKFFXPPP 909
+ GGGP P + P G+ PPP
Sbjct: 561 PGAGQ--GGGPPPPGAGQGGPPPPGAGQEGPPPP 592
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 867 PPPPPPPPPPPPPPPPPPP 885
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +2
Query: 494 PXXXXFXKKRGGXXPKXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPP 673
P K GG P P PPPP P P P PP + P P
Sbjct: 108 PLMNAVKKYLGGYVPPPPPT-GTLPPPPVTPPPGPETPP--PPDTPAPPVPPTEAPPTAP 164
Query: 674 PXAPKXLKXPP 706
P + PP
Sbjct: 165 PTGGSCVSKPP 175
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 703 GGF*XFGGXXGGXRXXFXKXXGGGXF*XXKXFXXXGXGGPXXXGGGXFXGGXGG 542
GG+ GG GG + + GGG + G G GGG GG GG
Sbjct: 186 GGYRSGGGGYGGSKGGYGGGSGGGGY--------GGGRGGGGYGGGHGGGGYGG 231
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 543 PPXPPKKXPPPXXXGPPXP 599
PP PP PPP PP P
Sbjct: 102 PPPPPPPPPPPPPPPPPPP 120
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 539 KXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
+ P P PPP P P P+ PPP PPP P PP
Sbjct: 43 RPPNTPIPGDPPP--NIPIPGNPPPNTPIPGDPPPN-TPIPGDPPPNTPIPGNPPP 95
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +2
Query: 539 KXPXXPXKXPPPPXXGXPXPXXXKXFXPLKXXPPPXFXKXXPXPPPXAPKXLKXPP 706
+ P P + PP P P P + P PP + P PP P+ PP
Sbjct: 312 RYPQSPLRYPPSPIRYPPLP---SRYPP----SPPRYPSSHPRYPPSPPRYPPSPP 360
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,143
Number of Sequences: 59808
Number of extensions: 200233
Number of successful extensions: 2385
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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