Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O21
(895 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 344 2e-93
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 341 2e-92
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 338 1e-91
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 295 1e-78
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 236 6e-61
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 211 2e-53
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 184 2e-45
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 180 4e-44
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 161 2e-38
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 155 2e-36
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 138 2e-31
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 128 2e-28
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 127 3e-28
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 127 4e-28
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 126 6e-28
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 123 7e-27
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 121 2e-26
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 121 2e-26
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 121 2e-26
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 118 2e-25
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 117 4e-25
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 116 8e-25
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 115 2e-24
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 112 1e-23
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 112 1e-23
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 112 1e-23
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 111 2e-23
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 111 2e-23
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 111 3e-23
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 111 3e-23
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 110 5e-23
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 109 7e-23
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 109 9e-23
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 109 1e-22
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 108 2e-22
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 108 2e-22
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 107 3e-22
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 107 3e-22
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 107 4e-22
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 107 4e-22
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 107 4e-22
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 107 5e-22
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 107 5e-22
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 107 5e-22
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 107 5e-22
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 106 7e-22
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 106 7e-22
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 106 7e-22
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 106 7e-22
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 106 9e-22
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 106 9e-22
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 106 9e-22
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 1e-21
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 105 1e-21
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 105 2e-21
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 105 2e-21
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 105 2e-21
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 105 2e-21
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 104 3e-21
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 104 3e-21
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 104 3e-21
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 104 3e-21
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 104 4e-21
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 104 4e-21
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 104 4e-21
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 104 4e-21
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 104 4e-21
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 104 4e-21
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 103 5e-21
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 103 5e-21
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 103 8e-21
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 103 8e-21
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 102 1e-20
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 102 1e-20
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 102 1e-20
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 101 2e-20
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 101 2e-20
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 101 2e-20
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 101 2e-20
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 101 3e-20
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 100 4e-20
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 100 4e-20
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 100 6e-20
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 100 6e-20
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 100 6e-20
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 99 8e-20
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 100 1e-19
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 99 1e-19
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 99 1e-19
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 99 1e-19
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 99 1e-19
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 99 1e-19
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 99 2e-19
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 99 2e-19
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 99 2e-19
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 99 2e-19
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 99 2e-19
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 99 2e-19
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 98 2e-19
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 98 3e-19
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 98 3e-19
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 97 4e-19
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 97 4e-19
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 97 4e-19
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 97 4e-19
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 97 5e-19
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 97 7e-19
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 97 7e-19
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 97 7e-19
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 97 7e-19
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 97 7e-19
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 97 7e-19
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 97 7e-19
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 96 9e-19
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 96 9e-19
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 96 1e-18
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 96 1e-18
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 96 1e-18
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 96 1e-18
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 96 1e-18
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 96 1e-18
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 95 2e-18
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 95 2e-18
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 95 3e-18
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 95 3e-18
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 94 4e-18
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 94 4e-18
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 94 4e-18
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 94 4e-18
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 94 4e-18
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 94 4e-18
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 94 5e-18
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 94 5e-18
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 94 5e-18
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 93 7e-18
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 93 7e-18
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 93 7e-18
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 93 7e-18
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 93 7e-18
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 93 7e-18
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 93 9e-18
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 93 9e-18
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 93 9e-18
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 93 1e-17
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 93 1e-17
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 93 1e-17
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 93 1e-17
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 93 1e-17
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 93 1e-17
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 93 1e-17
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 92 2e-17
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 92 2e-17
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 92 2e-17
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 92 2e-17
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 92 2e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 92 2e-17
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 92 2e-17
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 92 2e-17
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 92 2e-17
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 92 2e-17
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 92 2e-17
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 92 2e-17
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 92 2e-17
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 92 2e-17
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 92 2e-17
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 92 2e-17
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 92 2e-17
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 91 3e-17
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 91 3e-17
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 91 3e-17
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 91 3e-17
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 91 3e-17
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 91 3e-17
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 91 3e-17
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 91 3e-17
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 91 3e-17
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 91 3e-17
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 91 3e-17
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 91 3e-17
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 91 5e-17
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 91 5e-17
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 91 5e-17
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 91 5e-17
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 91 5e-17
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 90 6e-17
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 90 6e-17
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 90 6e-17
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 90 6e-17
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 90 6e-17
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 90 6e-17
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 90 6e-17
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 90 6e-17
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 90 6e-17
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 90 8e-17
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 90 8e-17
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 90 8e-17
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 90 8e-17
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 90 8e-17
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 90 8e-17
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 90 8e-17
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 89 1e-16
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 89 1e-16
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 1e-16
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 89 1e-16
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 89 1e-16
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 89 2e-16
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 89 2e-16
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 89 2e-16
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 89 2e-16
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 89 2e-16
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 89 2e-16
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 89 2e-16
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 89 2e-16
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 88 2e-16
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 88 2e-16
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 88 2e-16
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 88 2e-16
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 88 2e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 88 2e-16
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 3e-16
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 88 3e-16
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 88 3e-16
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 88 3e-16
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 88 3e-16
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 88 3e-16
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 87 6e-16
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 87 6e-16
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 6e-16
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 87 6e-16
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 87 8e-16
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 87 8e-16
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 87 8e-16
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 86 1e-15
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 86 1e-15
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 86 1e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 86 1e-15
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 86 1e-15
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 86 1e-15
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 86 1e-15
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 86 1e-15
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 86 1e-15
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 86 1e-15
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 86 1e-15
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 86 1e-15
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 85 2e-15
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 85 2e-15
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 85 2e-15
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 2e-15
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 2e-15
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 85 2e-15
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 85 2e-15
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 85 2e-15
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 85 2e-15
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 85 2e-15
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 85 3e-15
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 85 3e-15
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 3e-15
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 85 3e-15
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 85 3e-15
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 85 3e-15
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 84 4e-15
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 84 4e-15
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 84 5e-15
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 84 5e-15
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 84 5e-15
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 83 7e-15
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 83 7e-15
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 83 7e-15
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 83 7e-15
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 83 7e-15
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 83 9e-15
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 83 9e-15
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 83 9e-15
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 83 9e-15
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 83 9e-15
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 83 9e-15
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 83 1e-14
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 83 1e-14
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 83 1e-14
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 83 1e-14
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-14
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 82 2e-14
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 2e-14
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 82 2e-14
UniRef50_A5B712 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 82 2e-14
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 82 2e-14
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 82 2e-14
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 82 2e-14
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 82 2e-14
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 82 2e-14
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 82 2e-14
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 82 2e-14
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 81 3e-14
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 81 3e-14
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 81 3e-14
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 81 3e-14
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 81 3e-14
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 81 3e-14
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 81 3e-14
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 81 3e-14
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 81 4e-14
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 81 4e-14
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 81 4e-14
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 81 4e-14
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 81 4e-14
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 81 4e-14
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 81 4e-14
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 81 4e-14
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 81 5e-14
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 5e-14
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 81 5e-14
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 81 5e-14
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 81 5e-14
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 81 5e-14
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 81 5e-14
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 81 5e-14
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 81 5e-14
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 80 7e-14
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 7e-14
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 80 7e-14
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 80 7e-14
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 80 7e-14
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 80 7e-14
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 80 7e-14
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 80 7e-14
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 7e-14
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 80 9e-14
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 9e-14
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 80 9e-14
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 80 9e-14
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 80 9e-14
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 79 1e-13
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 79 1e-13
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 79 1e-13
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 79 1e-13
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 79 1e-13
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 79 1e-13
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 79 1e-13
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 1e-13
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 2e-13
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 79 2e-13
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 79 2e-13
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 79 2e-13
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 79 2e-13
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 79 2e-13
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 79 2e-13
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 79 2e-13
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 79 2e-13
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 79 2e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 79 2e-13
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 79 2e-13
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 79 2e-13
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 79 2e-13
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 78 3e-13
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 78 3e-13
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 78 3e-13
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 78 3e-13
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 78 3e-13
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 78 3e-13
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 78 3e-13
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 78 3e-13
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 78 3e-13
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 78 3e-13
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 77 5e-13
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 77 5e-13
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 77 5e-13
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 77 5e-13
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 77 5e-13
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 77 5e-13
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 77 5e-13
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 77 5e-13
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 77 5e-13
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 77 5e-13
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 77 6e-13
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 77 6e-13
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 77 6e-13
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 77 6e-13
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 6e-13
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 77 8e-13
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 77 8e-13
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 77 8e-13
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 77 8e-13
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 77 8e-13
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 77 8e-13
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 77 8e-13
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 77 8e-13
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 77 8e-13
UniRef50_UPI0000E4A264 Cluster: PREDICTED: hypothetical protein;... 76 1e-12
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 76 1e-12
UniRef50_Q6CH90 Cluster: Yarrowia lipolytica chromosome A of str... 76 1e-12
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 76 1e-12
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 1e-12
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 76 1e-12
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 76 1e-12
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 76 1e-12
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 76 1e-12
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 76 1e-12
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 76 1e-12
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 76 1e-12
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 76 1e-12
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 75 2e-12
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 75 2e-12
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 75 2e-12
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 75 2e-12
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 75 2e-12
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 75 2e-12
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 2e-12
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 75 2e-12
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 75 3e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 75 3e-12
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 75 3e-12
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 75 3e-12
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 75 3e-12
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 75 3e-12
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 3e-12
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 74 4e-12
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 74 4e-12
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 74 4e-12
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 74 4e-12
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 74 4e-12
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 74 4e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 74 4e-12
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 74 6e-12
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 74 6e-12
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 74 6e-12
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 74 6e-12
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 74 6e-12
UniRef50_A4V6L4 Cluster: DEAD/H box protein; n=1; Dugesia japoni... 74 6e-12
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 74 6e-12
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 74 6e-12
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 73 8e-12
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 73 8e-12
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 8e-12
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 73 8e-12
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 73 8e-12
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 73 8e-12
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 73 8e-12
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 73 8e-12
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 73 8e-12
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 8e-12
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 73 8e-12
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 73 1e-11
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 73 1e-11
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 73 1e-11
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 73 1e-11
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 73 1e-11
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 73 1e-11
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 73 1e-11
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 73 1e-11
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 73 1e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 73 1e-11
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 73 1e-11
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 73 1e-11
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 73 1e-11
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 73 1e-11
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 73 1e-11
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 73 1e-11
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 73 1e-11
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 73 1e-11
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 73 1e-11
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 72 2e-11
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 72 2e-11
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 72 2e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 72 2e-11
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 72 2e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 72 2e-11
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 72 2e-11
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 72 2e-11
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 72 2e-11
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q015D2 Cluster: DEAD/DEAH box helicase family protein /... 72 2e-11
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 72 2e-11
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 72 2e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 72 2e-11
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 72 2e-11
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 72 2e-11
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 72 2e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 71 3e-11
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 71 3e-11
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 344 bits (846), Expect = 2e-93
Identities = 170/226 (75%), Positives = 185/226 (81%), Gaps = 1/226 (0%)
Frame = +2
Query: 218 APKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA 397
APKK+VKG+YVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA
Sbjct: 26 APKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA 85
Query: 398 KSGMGKTAVFVLATLQQLEPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 574
KSGMGKTAVFVLATLQQLEPS+++ +VLVMCHTRELAFQISKEYERFSKYM V+V+VF
Sbjct: 86 KSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVF 145
Query: 575 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMR 754
FGGM IQKDEE LK+ PHIVVGTPGRILA F+LDECDKMLE LDMR
Sbjct: 146 FGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMR 205
Query: 755 RDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXDE 892
RDVQEI R+TPHG+ + + + KFMQDPME YV DE
Sbjct: 206 RDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDE 251
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 341 bits (837), Expect = 2e-92
Identities = 165/229 (72%), Positives = 181/229 (79%)
Frame = +2
Query: 206 STEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDI 385
ST PKK++KGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+
Sbjct: 25 STPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDV 84
Query: 386 LCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV 565
LCQAKSGMGKTAVFVLATLQQ+EP V VLVMCHTRELAFQISKEYERFSKYM V+V
Sbjct: 85 LCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKV 144
Query: 566 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 745
SVFFGG+ I+KDEEVLK CPH+VVGTPGRILA F+LDECDKMLE L
Sbjct: 145 SVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQL 204
Query: 746 DMRRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXDE 892
DMRRDVQEI R TPH + + + + KFMQDPME +V DE
Sbjct: 205 DMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDE 253
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 338 bits (830), Expect = 1e-91
Identities = 166/227 (73%), Positives = 179/227 (78%)
Frame = +2
Query: 212 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 391
E KK+VKGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+LC
Sbjct: 28 EAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 87
Query: 392 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 571
QAKSGMGKTAVFVLATLQQLEP V VLVMCHTRELAFQISKEYERFSKYM V+V+V
Sbjct: 88 QAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAV 147
Query: 572 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 751
FFGG+ I+KDEEVLK CPHIVVGTPGRILA FILDECDKMLE LDM
Sbjct: 148 FFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDM 207
Query: 752 RRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXDE 892
RRDVQEI R TPH + + + + KFMQDPME +V DE
Sbjct: 208 RRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 295 bits (723), Expect = 1e-78
Identities = 142/220 (64%), Positives = 165/220 (75%)
Frame = +2
Query: 233 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 412
VK YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMG
Sbjct: 36 VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
Query: 413 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 592
KTAVFVL+TLQQ+EPS V LV+CHTRELA+QI E+ RFS Y+ +VSVF+GG+ I
Sbjct: 96 KTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 593 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
+ +++LK CPHIVVGTPGR+LA FILDECDKMLESLDMRRDVQEI
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
Query: 773 XRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXDE 892
+ TPH + + + + KFMQDPME YV DE
Sbjct: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDE 255
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 236 bits (577), Expect = 6e-61
Identities = 123/170 (72%), Positives = 132/170 (77%), Gaps = 28/170 (16%)
Frame = +2
Query: 212 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 391
E KK+VKGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+LC
Sbjct: 28 EAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 87
Query: 392 QAKSGMGKTAVFVLATLQQLEP-------SESH---------------------VYVLVM 487
QAKSGMGKTAVFVLATLQQLEP +SH V VLVM
Sbjct: 88 QAKSGMGKTAVFVLATLQQLEPVTGQVCFCDSHFPRGDNEELHLPYVSVYFLPKVSVLVM 147
Query: 488 CHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIV 637
CHTRELAFQISKEYERFSKYM V+V+VFFGG+ I+KDEEVLK CPHIV
Sbjct: 148 CHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIV 197
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 211 bits (515), Expect = 2e-53
Identities = 113/241 (46%), Positives = 150/241 (62%), Gaps = 21/241 (8%)
Frame = +2
Query: 233 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 412
++GSY ++H+ GF+DF LKPE+LRAI + GFEHPSEVQ E IP A+ G DILCQAKSGMG
Sbjct: 45 MRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMG 104
Query: 413 KTAVFVLATLQQLEPSESH--------------------VYVLVMCHTRELAFQISKEYE 532
KTAVFVL+ LQQL+ +E+ V L + HTRELA+QI E++
Sbjct: 105 KTAVFVLSILQQLDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFD 164
Query: 533 RFSKYMSGVRVSVFFGGMPIQKDEEVLK-TACPHIVVGTPGRILAXXXXXXXXXXXXXXF 709
RFSKY+ VR V +GG+ + K ++ K PHI++GTPGRILA F
Sbjct: 165 RFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHF 224
Query: 710 ILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXD 889
+LDECDK LE LDMR DVQ+I +TP + + + + KF+Q+P+E ++ D
Sbjct: 225 VLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDD 284
Query: 890 E 892
E
Sbjct: 285 E 285
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 184 bits (449), Expect = 2e-45
Identities = 99/219 (45%), Positives = 134/219 (61%), Gaps = 4/219 (1%)
Frame = +2
Query: 239 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 418
G++ ++ GF+DF LK E+ AI + GFEHPSEVQH+ +P+A+LG DIL QAKSGMGKT
Sbjct: 28 GTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKT 87
Query: 419 AVFVLATLQQLE--PSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 586
AVFV A L+Q+E P Y +V+ H RELA+QI +E++RFSKY+ VFFGG+
Sbjct: 88 AVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGGI 147
Query: 587 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 766
P ++ + LK P I+VGTPGR+ A F++DE D+ LE + MRRDVQ
Sbjct: 148 PEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDVQ 207
Query: 767 EIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYV 883
EI P + + + + KFM+D E YV
Sbjct: 208 EIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYV 246
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 180 bits (438), Expect = 4e-44
Identities = 99/231 (42%), Positives = 132/231 (57%), Gaps = 3/231 (1%)
Frame = +2
Query: 206 STEVAP-KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 382
+ AP +K +G HSS F DF LK ++LR++ + GFE PSEVQH+CIP A+ G D
Sbjct: 19 ANSTAPVQKHAQGFNTGGHSS-FNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKD 77
Query: 383 ILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVR 562
+LCQAK+G GKTAVFVL+ L QL LV+CHTRELAFQI E++R K+ + +
Sbjct: 78 VLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF-TNFK 136
Query: 563 VSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA--XXXXXXXXXXXXXXFILDECDKML 736
V +GG+ D LKT PHI+V TPGR L+ FI+DECD++L
Sbjct: 137 VKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVL 196
Query: 737 ESLDMRRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXD 889
S MR DVQ I P + + ++ KF+QD +E +V D
Sbjct: 197 SSNKMRSDVQNIFYELPRKKQVMMFSGTMSDESKKTCRKFLQDQIEIFVED 247
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 161 bits (392), Expect = 2e-38
Identities = 88/223 (39%), Positives = 129/223 (57%), Gaps = 5/223 (2%)
Frame = +2
Query: 236 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 415
K +YV S F++ LK EI+++I DCGFEHPSEVQ + IP+A+L DILCQAKSGMGK
Sbjct: 26 KDTYVGTVS--FQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAKSGMGK 83
Query: 416 TAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYM-----SGVRVSVFFG 580
TAVFVL+ L Q HV +V+CHTRELA Q+ E++R K + ++ + + G
Sbjct: 84 TAVFVLSILNQGLFLGDHVSAIVICHTRELARQVQNEFDRMKKRLVESIGKDIQTASYIG 143
Query: 581 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRD 760
G P D + LK P I+VGTPGR+ + F++DECDK+L S D
Sbjct: 144 GNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDLSKLDTFVIDECDKILSS-KSELD 202
Query: 761 VQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFMQDPMEXYVXD 889
+ + ++ + + I +N+ K++++P E ++ D
Sbjct: 203 IMSLFMSSSKNKQVMMFSATISEQNKALCRKYLKNPFEVFIDD 245
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 155 bits (375), Expect = 2e-36
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F++F LK E+LRA+ + GFEHP+ VQ E + A+LG ++CQAK+G GKTAVFVL L
Sbjct: 73 SQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTVL 132
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFF-GGMPIQKDEEVLKT 619
+ + V LV+ HTRELA Q E+ R K+M V+V F+ GG P+ + + ++T
Sbjct: 133 NTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIET 192
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
P IVVGTPGR+ FILDE D M+E L+MR+D+Q+I +P
Sbjct: 193 VKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSP 249
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 138 bits (334), Expect = 2e-31
Identities = 68/173 (39%), Positives = 103/173 (59%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F +F + E+L+AI D GFE P+ +Q IPQ + G D+ QA++G GKTA F + +++
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+P +V LV+ TRELA Q ++E+ R KY G+ V +GG PI++ LK
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALK-GTV 125
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+V+GTPGR++ FILDE D+ML+ + R D+++I R+TP
Sbjct: 126 QVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLD-MGFREDIEDIFRDTP 177
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 128 bits (309), Expect = 2e-28
Identities = 75/202 (37%), Positives = 99/202 (49%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L IL+A+ D GFE PS +Q CIP + G D+L A++G GKTA F L L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++PSE H +LVM TRELA Q++ E F KY G R+ +GG LK
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA- 125
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDD 808
+VVGTPGRIL +LDE D+ML + DV+ + P
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLR-MGFIDDVETVMAELPENHQTAL 184
Query: 809 VLSHIE*RNQTCV*KFMQDPME 874
+ + + +FM DP E
Sbjct: 185 FSATMPEPIRRITKRFMNDPQE 206
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 127 bits (307), Expect = 3e-28
Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Frame = +2
Query: 221 PKKEVK---GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 391
PKK+ + ++ + F DF LK E+L I + GFE PS +Q E IP A+ G DIL
Sbjct: 29 PKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILA 88
Query: 392 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 571
+AK+G GKTA FV+ TL++++P + + L+M TRELA Q S+ K+ G+ V
Sbjct: 89 RAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH-CGISCMV 147
Query: 572 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 751
GG + +D+ + HI+VGTPGR+L FI+DE DKML S D
Sbjct: 148 TTGGTNL-RDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDF 205
Query: 752 RRDVQEIXRNTP 787
+ +++I P
Sbjct: 206 KTIIEQILSFLP 217
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 127 bits (306), Expect = 4e-28
Identities = 65/173 (37%), Positives = 99/173 (57%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D L+ E+L+AI + GF PS +Q IP+ + G D++ QA++G GKTA F L LQ+
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ ++ V LV+C TRELA Q++ +K++ GVR+ +GG PI+ L+
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA- 125
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGRIL +LDE D+ML+ + R D++ I P
Sbjct: 126 QVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLD-MGFREDIERILSEMP 177
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 126 bits (305), Expect = 6e-28
Identities = 75/202 (37%), Positives = 102/202 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D LK IL A+ D G+E PS +Q ECIP + G D+L A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+P +LV+ TRELA Q+++ FSK+M GV V +GG L+ P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG-P 126
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDD 808
IVVGTPGR+L +LDE D+ML + DV+ I P G
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 809 VLSHIE*RNQTCV*KFMQDPME 874
+ + + +FM++P E
Sbjct: 186 FSATMPEAIRRITRRFMKEPQE 207
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 123 bits (296), Expect = 7e-27
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Frame = +2
Query: 218 APKKEVKGSYVSI---HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 388
AP K+++ + S F DF L+ E+L I GFE PS +Q + IP A+ G DIL
Sbjct: 18 APPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDIL 77
Query: 389 CQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 568
+AK+G GKTA F++ TL ++ S SH+ L++ TRELA Q S+ + ++ ++V
Sbjct: 78 ARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVM 137
Query: 569 VFFGGMPIQKDEEVLKTACP-HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
+ GG ++ D +L+ P HI+VGTPGRIL F++DE DK+L
Sbjct: 138 ITTGGTTLRDD--ILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL 192
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 121 bits (292), Expect = 2e-26
Identities = 61/173 (35%), Positives = 95/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L EI AI++ GFE S +Q E IP + G DI+ A++G GKTA F + T++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
LE H+ L++C TREL Q+S+++ + KY V +GG I++ L+ P
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKN-P 129
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
IV+ TPGR++ +LDE D+ML+ + R D++ I ++TP
Sbjct: 130 QIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLD-MGFREDMEFILKDTP 181
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 121 bits (292), Expect = 2e-26
Identities = 58/174 (33%), Positives = 99/174 (56%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D + PEI +A+ D GFE S +Q IPQ + D+ QA++G GKTA F + L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ ++++ +++C TRELA Q+++E + S Y+ + V +GG PI + + L+
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGV- 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
I++GTPGR++ ILDE D+ML+ + R D++ I + P+
Sbjct: 125 QIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLD-MGFREDIEYILEDIPY 177
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 121 bits (292), Expect = 2e-26
Identities = 58/173 (33%), Positives = 96/173 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L P I++AI D G+E P+ +Q E IP + G D+ QA +G GKTA F + ++
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+P+ +V +V+C +RELA Q+ E + + + G+ + +GG PI++ + L
Sbjct: 66 CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSRGV- 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I++GTPGR++ +LDE D+ML+ + R D++EI + P
Sbjct: 125 QIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLD-MGFREDIEEILSHIP 176
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 118 bits (284), Expect = 2e-25
Identities = 63/173 (36%), Positives = 96/173 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D L PE++ AI G+ + +Q + IP + G D+ QA++G GKTA F + ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ S + L++C TRELA Q+ E ++ SK+ G+RV +GG I++ LK A
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLK-AGA 121
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVVGTPGRI+ ILDE D+ML ++ R D++ I P
Sbjct: 122 HIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEML-NMGFREDIELILTRLP 173
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 117 bits (282), Expect = 4e-25
Identities = 61/173 (35%), Positives = 100/173 (57%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
FRD L ++L+A+ D GFE PS +Q + IP + G D++ QA++G GKTA F + +++
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L P + V LV+ TRELA Q+++E + ++ + V+ +GG I++ L+
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRH-ARVKTIAIYGGQSIERQIRSLRFGV- 125
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+V+GTPGRIL +LDE D+ML+ + D+++I +NTP
Sbjct: 126 DVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLD-MGFIEDIEKILQNTP 177
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 116 bits (279), Expect = 8e-25
Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L+ E+L+AI+ GFE PS+VQ IP A+ D++CQAKSG GKTAVFVL+ L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 449 LEPSES--HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF--FGGMPIQKDEEVLK 616
++P + V LV+C+T ELA QI KE+ RF+ + ++ + GG+ + LK
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPDIKDKILCAIGGVTVSLHVRALK 249
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ I VGT GR+ +LDE D + + D + + + P
Sbjct: 250 SKDVSIAVGTIGRVSDLVERGALDLSFIKYLVLDEFDALFKEEDNFKKIAGLISKMP 306
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 115 bits (276), Expect = 2e-24
Identities = 66/168 (39%), Positives = 85/168 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D LK +LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
LE LV+ TRELA QI K YM G GG ++ + + L+ P
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKLQAEAP 153
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
HIVVGTPGR+ F+LDE D+ML S + + EI
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEI 200
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 112 bits (270), Expect = 1e-23
Identities = 64/202 (31%), Positives = 104/202 (51%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +++A+ G+E PS +Q IP + G D+L QA++G GKTA F L L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ VLV+ TRELA Q+++ ++R++ +SG RV +GG + LK
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGV- 135
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDD 808
H++VGTPGR++ +LDE D+ML + DV+E+ R P
Sbjct: 136 HVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLR-MGFIEDVEEVLRKLPASRQVAL 194
Query: 809 VLSHIE*RNQTCV*KFMQDPME 874
+ + + + ++QDP+E
Sbjct: 195 FSATMPPQIRRIAQTYLQDPIE 216
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 112 bits (270), Expect = 1e-23
Identities = 61/173 (35%), Positives = 96/173 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L P I+RA+ + GFE + +Q + IP A+ G D++ QA++G GKTA F + ++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ P+ V LV+ TRELA Q+++E R K + G+R +GG + + L+ P
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGGQDFRSQVKALE-ELP 121
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVVGTPGR+L +LDE DKML+ + + ++I + P
Sbjct: 122 HIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLD-MGFIDEAEKILKKLP 173
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 112 bits (269), Expect = 1e-23
Identities = 57/173 (32%), Positives = 90/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L ++L +++CGF PS +QH+ IP G D++ +AKSG GKTAVF + L+
Sbjct: 26 FSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALEM 85
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ S V V+++ TRE+A QI + + G++V F GG+ + D + L
Sbjct: 86 IDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKLSNC-- 143
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HI +G PGR+ F+LDE DK++E ++D+ I P
Sbjct: 144 HIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEE-SFQKDINYIYAKLP 195
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 111 bits (268), Expect = 2e-23
Identities = 64/170 (37%), Positives = 93/170 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
+ D+ LK ++L+ I GFE PS +Q I + G DI QA+SG GKT F +A LQ
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ S+ +LV+ TRE+A Q + +E +M G RV++ GG PI D+ L+ P
Sbjct: 100 CDMSQDVTQILVLASTREIAAQNAARFEDLGCFM-GARVALLSGGSPIAADKVALEKK-P 157
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
HIVVGTPGR+ F++DE D+ML++ + V+ I R
Sbjct: 158 HIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKA-GFQEQVKSIFR 206
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 111 bits (267), Expect = 2e-23
Identities = 65/183 (35%), Positives = 85/183 (46%)
Frame = +2
Query: 239 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 418
G V + F LL +L + GFE PS VQ + IP G+D++ QAKSG GKT
Sbjct: 55 GDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 114
Query: 419 AVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 598
VF L L +L++ TRE+A QI M G+ VF GG P+ +
Sbjct: 115 CVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 174
Query: 599 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
D+ LK HI VG+PGRI FILDE DK+LE + + I
Sbjct: 175 DKTRLKKC--HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 232
Query: 779 NTP 787
+ P
Sbjct: 233 SLP 235
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 111 bits (266), Expect = 3e-23
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L I+R+I D GF + S +Q E +P + G DI+ +A++G GKTA F++ LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 449 L---EPSE---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
L +P E S L++ TRELA QI+K+ + SKY + + + GG+ K +E
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKY-ADLNIVTVLGGVDYDKQKEQ 218
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ +VV TPGR+L ++DE D+ML+ + D++ I R TP
Sbjct: 219 LENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLD-MGFIPDLKRIIRGTP 276
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 111 bits (266), Expect = 3e-23
Identities = 69/210 (32%), Positives = 95/210 (45%)
Frame = +2
Query: 239 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 418
G + + F LL +L + GFE PS VQ + IP G+D++ QAKSG GKT
Sbjct: 54 GDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 113
Query: 419 AVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 598
VF L L +L++ TRE+A QI M G+ VF GG P+ +
Sbjct: 114 CVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173
Query: 599 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
D+ LK HI VG+PGRI FILDE DK+LE + + I
Sbjct: 174 DKTRLKKC--HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 231
Query: 779 NTPHGETGDDVLSHIE*RNQTCV*KFMQDP 868
+ P + V + + K+M+DP
Sbjct: 232 SLPASKQMLAVSATYPEFLANALTKYMRDP 261
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 110 bits (264), Expect = 5e-23
Identities = 62/173 (35%), Positives = 94/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
FR+ L +L+++ GFE + +Q E IP A+ G DI+ QA++G GKTA F L L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + V +V+ TRELA Q+ +E + K+ VR+ +GG I + LK P
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-P 121
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HI+VGTPGRIL +LDE D+ML ++ D++ I + P
Sbjct: 122 HIIVGTPGRILDHINRKTLRLQNVETVVLDEADEML-NMGFIEDIEAILTDVP 173
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 109 bits (263), Expect = 7e-23
Identities = 63/167 (37%), Positives = 82/167 (49%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F LL +L + GF+ PS +Q + IP G+D++ QAKSG GKT VF L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + VLV+ TRE+A QI M G+ VF GG PI +D++ LK
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKKC-- 145
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQE 769
HI +G+PGRI F+LDE DK+LE D QE
Sbjct: 146 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLED-DSSSSFQE 191
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 109 bits (262), Expect = 9e-23
Identities = 63/175 (36%), Positives = 89/175 (50%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F F + +A+ D F PS +Q + IP + G D + A++G GKTA F L L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
Q L P S L++ TRELA Q+++++E SKY V ++V GG + + L++
Sbjct: 66 QNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSG 125
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGRIL FILDE D+ML + DV+ I P
Sbjct: 126 A-QVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLR-MGFIEDVETILEKLP 178
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 109 bits (261), Expect = 1e-22
Identities = 59/173 (34%), Positives = 95/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L+ +L A+ + G+E PS +Q CIP + G D+L +A++G GKTA F L L +
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+ + + VLV+ TRELA Q+++ ++R++K + G V +GG + L
Sbjct: 106 LDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGA- 164
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++VGTPGR++ +LDE D+ML + DV+ I ++TP
Sbjct: 165 HVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLR-MGFIDDVEWILQHTP 216
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 108 bits (260), Expect = 2e-22
Identities = 56/173 (32%), Positives = 92/173 (53%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F LL +I + + GF+ PS +Q + IP G D++ ++KSG GKT VF L+
Sbjct: 26 FASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLVFSTIALET 85
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ ++ H+ VL++ TRE+A QI +++G+++ F GG P++ D + K++
Sbjct: 86 VNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDD--LKKSSKC 143
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HI VG PGR+ F+LDE DK++E + D+ EI + P
Sbjct: 144 HIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEE-SFQSDINEIYNSLP 195
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 108 bits (260), Expect = 2e-22
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Frame = +2
Query: 236 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 412
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 413 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 592
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 593 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
+ + LK P IV+GTPGRI F+LDE DK+++ + R D+ I
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEV-FRDDINII 188
Query: 773 XRNTP 787
+ P
Sbjct: 189 INSLP 193
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 107 bits (258), Expect = 3e-22
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D LK +L+AI D GFE PS++Q E IP A+ G DI+ QA++G GKTA F A +
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 449 LEPS--ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
+ S + L++ TRELA Q+++E R K+ + V +GG PI + LK
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH-EKLSVLPIYGGQPIDRQIRALKNG 124
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN 781
IVVGTPGR+L +LDE D+ML ++ D++EI ++
Sbjct: 125 V-DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEML-NMGFIDDLEEIVKS 175
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 107 bits (258), Expect = 3e-22
Identities = 58/173 (33%), Positives = 91/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +LR + + G+E PS +Q IP + D+L QA++G GKTA F L L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ ++ LV+ TRELA Q+++ ++R++ Y+ G V +GG L+
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGV- 127
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H+VVGTPGR++ +LDE D+ML + DV+ I + TP
Sbjct: 128 HVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLR-MGFIDDVETILQKTP 179
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 107 bits (257), Expect = 4e-22
Identities = 54/154 (35%), Positives = 88/154 (57%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D+ LK E+L I + G+E PS +Q E IP A+ G DIL +AK+G GK+ +++ L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + H+ LV+ TRELA Q+S+ + +K++ GV+V GG + +D+ +
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL-RDDIMRLDETV 209
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDK 730
H+V+ TPGRIL ++DE K
Sbjct: 210 HVVIATPGRILDLMKKGVAKVDKVQIMVMDEVGK 243
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 107 bits (257), Expect = 4e-22
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F PEILRAI +CG+++ + VQ + IP G D+L A++G GKTA F L LQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 449 LEP-----SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
+ S+ L++ TRELA Q++ +SK+M+ + V +GGM + + L
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMN-ISVLTIYGGMKMATQAQKL 121
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
K I+V TPGR+L +LDE D+ML+ + D+Q+I
Sbjct: 122 KQGA-DIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLD-MGFSTDIQKI 172
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 107 bits (257), Expect = 4e-22
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 7/189 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L ++++I + GFE+ SE+Q E +P +LG DI+ QA++G GKTA F++A +
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAFLIAMISD 132
Query: 449 -----LEPSESHVYV--LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
LE ++ + L++ TRELA QI+ E + + + V GG+ +K +
Sbjct: 133 FLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCH-LNVVTLVGGLSYEKQKI 191
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+T I+V TPGR+L +LDE D+ML S+ DV+ I R TP
Sbjct: 192 ALETENVDILVATPGRLLDFARSRKVQLGKVECLVLDEADRML-SMGFIPDVKSIIRMTP 250
Query: 788 HGETGDDVL 814
H ET +L
Sbjct: 251 HKETRQTML 259
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 107 bits (256), Expect = 5e-22
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ F +P I A+ + GFE P+EVQ + IP G ++ Q+++G GKT F+L + +
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTAC 625
++P+ V +++ +RELA QI +E ++ +++ +RVS F GG Q+ LK
Sbjct: 64 VKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLKHQQ 123
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PH+V+GTPGRIL F++DE D L+ + +V +I P
Sbjct: 124 PHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLD-MGFLAEVDQIAGRLP 176
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 107 bits (256), Expect = 5e-22
Identities = 57/176 (32%), Positives = 92/176 (52%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
+ GF + P +L AI G+E PS +Q + IP + G D++ QA++G GKTA F L
Sbjct: 22 TGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPM 81
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +++P+ +L++ TRELA Q++ +E ++ + GV V +GG P+ + L+
Sbjct: 82 LSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQ 141
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR+ +LDE D+ML+ L D++ I P
Sbjct: 142 GA-QILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLK-LGFMEDLEVIFAALP 195
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 107 bits (256), Expect = 5e-22
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAV-LGMDILCQAKSGMGKTAVFVLATLQ 445
F L +LRAI+D GFE+P+EVQ + IP + +D++ A++G GKTA F +Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
+++ + + L++ TREL QI+ E + +SKY G+ V +GG I + +K
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR+ ILDE D+ML ++ D+ I TP
Sbjct: 124 -QIIVATPGRMQDMINRRLVDISQINYCILDEADEML-NMGFYEDIVNILSTTP 175
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 107 bits (256), Expect = 5e-22
Identities = 60/174 (34%), Positives = 96/174 (55%)
Frame = +2
Query: 266 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 445
GF +F L+ E++ +I G+ P+EVQ IP A+ G D++ ++K+G GKTA +++ +
Sbjct: 3 GFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIIN 62
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
E + L++ TRELA Q++K E K SG+R V +GG+ I K E++
Sbjct: 63 N-TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQIELILRGA 120
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+I+VGTPGR L F+LDE D+ML+ + D+++I P
Sbjct: 121 -NIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLD-MGFIEDIKKIINVLP 172
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 106 bits (255), Expect = 7e-22
Identities = 58/162 (35%), Positives = 92/162 (56%)
Frame = +2
Query: 251 SIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV 430
S + F D+ LK E+L I + G+E PS +Q E IP A+ G DIL +AK+G GK+ ++
Sbjct: 78 STKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYL 136
Query: 431 LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
+ L++L+ + ++ +V+ TRELA Q+S+ + SK+M G +V GG + +D+ +
Sbjct: 137 IPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL-RDDVM 195
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
H+V+ TPGRIL +LDE DK+L
Sbjct: 196 RLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLL 237
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 106 bits (255), Expect = 7e-22
Identities = 56/163 (34%), Positives = 88/163 (53%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L P + I G+ + VQ + +P + G+D++ QA +G GKTA F L LQ+L+P+
Sbjct: 33 LSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPAL 92
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
+ LV+C TRELA Q+ K+ + + + +++ V GGMP+ L+ PH+VVG
Sbjct: 93 TRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVG 152
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
TPGRI +LDE D+ML+ + ++EI
Sbjct: 153 TPGRIQELARKRALHLGGVRTLVLDEADRMLD-MGFEEPIREI 194
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 106 bits (255), Expect = 7e-22
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+GF + L+PE+LR++ G+E P+ +Q E +P V G D+L QA +G GKTA F L L
Sbjct: 57 AGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLL 116
Query: 443 QQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
+L + + LV+ TRELA Q+S+ R+ + + G RV +GG PI + L
Sbjct: 117 HRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDL-GARVLPVYGGAPIGRQVRAL 175
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VV TPGR L +LDE D+ML+ + D+ I P
Sbjct: 176 VQGV-DVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLD-MGFAEDIDAILEQAP 231
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 106 bits (255), Expect = 7e-22
Identities = 54/168 (32%), Positives = 88/168 (52%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L+ +++R + F P+++Q IP A+ GMD+L Q+KSG GKT ++V+ LQ S
Sbjct: 32 LRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLIYVVTALQMCSLST 91
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
H VLV+ TRELA Q+ + + + +VS F GG + +D E L+ H+ +G
Sbjct: 92 QHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDVTRDREKLRNC--HVAIG 149
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
TPGR+L +LDE D++ + +++ V + P
Sbjct: 150 TPGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTASLQKTVNALIAVLP 197
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 106 bits (254), Expect = 9e-22
Identities = 56/165 (33%), Positives = 90/165 (54%)
Frame = +2
Query: 293 EILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHV 472
+IL + CGF+ PS +Q + IP G D++ +AKSG GKT VF + +L+ ++ S V
Sbjct: 6 KILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISSV 65
Query: 473 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 652
VL++ TRE+A QI++ + + ++V VF GG+ I+ D++ + I VG PG
Sbjct: 66 QVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNC--QIAVGAPG 123
Query: 653 RILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
RI F+LDE DK++E+ ++D+ I P
Sbjct: 124 RIRHLIDKGFLKVENVRLFVLDEADKLMET-SFQKDINYIFSKLP 167
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 106 bits (254), Expect = 9e-22
Identities = 58/180 (32%), Positives = 93/180 (51%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 427
V + + F L PE+L + + GFE + +Q E IP + G DI+ QAK+G GKTA F
Sbjct: 42 VPVSQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAF 101
Query: 428 VLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L L ++ + + L++C TRELA Q+ E + + + G++V GG ++ +
Sbjct: 102 SLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQAD 161
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ IVVGTPGR+ +LDE DKML+ + +++ + R+ P
Sbjct: 162 ALENGV-QIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLD-MGFADEIKTVMRDLP 219
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 106 bits (254), Expect = 9e-22
Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
+ D L E+ A+ + PS +Q IP A+ G D+L QA++G GKTA F + +++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 449 LE--PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
LE P+ + L++ TRELA Q+ E + + + + V +GG P++ E LK A
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLT-HGQRINVVAVYGGKPLRSQMEKLKRA 124
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PHIVVGTPGR++ +LDE D+ML+ + R D+++I R P
Sbjct: 125 -PHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLD-IGFRPDIEKILRRCP 177
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 105 bits (253), Expect = 1e-21
Identities = 61/163 (37%), Positives = 86/163 (52%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 427
+S S+GF L +LRAI + G+E PS +Q + IP + G D+L A++G GKTA F
Sbjct: 1 MSESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAF 60
Query: 428 VLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L L + + VLV+ TRELA Q++ E +SK+ S V+V+ +GG
Sbjct: 61 TLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFR 120
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
LK P VVGTPGR++ +LDE D+ML
Sbjct: 121 ALKQG-PQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEML 162
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 105 bits (253), Expect = 1e-21
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 460
L +L+AI D GFE PS++Q E IPQ + D++ A++G GKTA F LQ ++ S
Sbjct: 8 LNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQNIDAS 67
Query: 461 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
L++ TREL QI+ E + ++K++ GVRV +GG IQ+ + IVV
Sbjct: 68 SKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGA-QIVV 126
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSH 820
TPGR+ +LDE D+ML ++ D+ I +TP + +
Sbjct: 127 ATPGRMQDMMRRRMVDITKLSYCVLDEADEML-NMGFYEDITNILADTPEDKLTWLFSAT 185
Query: 821 IE*RNQTCV*KFMQDPMEXYV 883
+ +FM DP+E V
Sbjct: 186 MPREVARIAKEFMHDPLEITV 206
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 105 bits (252), Expect = 2e-21
Identities = 59/170 (34%), Positives = 93/170 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + EI +AI++ GFE PS +Q + IP + G D++ QA++G GKTA F + +++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ HV L++ TRELA Q+S E ++ SK+ +R +GG I + LK
Sbjct: 68 VSTGR-HVQALILTPTRELAIQVSGEIQKLSKHKK-IRTLPIYGGQSIVHQIKALKQGV- 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
+V+GTPGRI+ ILDE D+ML+ + D++ I R
Sbjct: 125 QVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLD-MGFIDDIESILR 173
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 105 bits (252), Expect = 2e-21
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
FR+ L IL+A+ + G+E PS +Q + IP A+ G D+L A++G GKT F LQ+
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 449 LE---PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L P+ + L++ TRELA QI + +E + K++ +R +V FGG+ Q + LK
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLP-LRSAVIFGGVGQQPQVDKLKK 121
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR+L F+LDE D+ML+ + DV+ + + P
Sbjct: 122 GV-DILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLD-MGFLHDVRRVLKLLP 175
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 105 bits (251), Expect = 2e-21
Identities = 53/157 (33%), Positives = 88/157 (56%)
Frame = +2
Query: 266 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 445
GF D L I A+ + G+ +P+ VQ A+ G D++ ++K+G GKTA F L L+
Sbjct: 30 GFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLE 89
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
++ E V L++C TRELA Q++ E + +K+ G++++ +GG +++ E+ L+
Sbjct: 90 KIPADERRVRALILCPTRELALQVADELKMLAKH-KGLKIAAIYGGASMKQQEDALEEGT 148
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
P I+VGTPGR+ +LDE D+ML
Sbjct: 149 P-IIVGTPGRVFDHINRGNLKLDACDHAVLDEADEML 184
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 105 bits (251), Expect = 2e-21
Identities = 54/160 (33%), Positives = 84/160 (52%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S F L ++++ + G+E +E+Q +P + G D++ QAK+G GKTA F L
Sbjct: 3 SKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGV 62
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +L + + VL++C TREL Q+SK ++ M +++ GGMP + + +
Sbjct: 63 LSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAH 122
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
HIVVGTPGRIL +LDE D+ML+
Sbjct: 123 GA-HIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLD 161
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 104 bits (250), Expect = 3e-21
Identities = 63/173 (36%), Positives = 87/173 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L IL A+ + GF P+ +Q IP + G D L +A++G GKTA F L L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L S+ +VM TRELA Q++ E + + + G++V +GG I LK+
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA- 146
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVVGTPGR+ FILDE D+ML+ + DV I P
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLK-MGFVDDVTWIMEQAP 198
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 104 bits (250), Expect = 3e-21
Identities = 58/173 (33%), Positives = 95/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F++ L E+++AI GFE + +Q + IP ++ D++ QA++G GKTA F + +++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ S V LV+ TRELA Q+S+E + + VRV +GG I++ LK P
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQIRALKKH-P 121
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++VGTPGRI+ +LDE D+ML ++ D++ I + P
Sbjct: 122 HVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEML-NMGFIEDIEAILSHVP 173
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 104 bits (250), Expect = 3e-21
Identities = 55/156 (35%), Positives = 91/156 (58%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F++ + ++++ GF+ P+ +Q + IP A+ G+DIL QA++G GKT F + +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ + V L++ TRELA Q++++ FS+ GV+V FGGMPI++ + LK P
Sbjct: 64 VVGKQG-VQSLILAPTRELAMQVAEQLREFSR-GQGVQVVTVFGGMPIERQIKALKKG-P 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
IVVGTPGR++ ILDE D+M+
Sbjct: 121 QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMM 156
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 104 bits (250), Expect = 3e-21
Identities = 57/173 (32%), Positives = 90/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + P +LRAI D G+E P+ +Q IP + G D++ A++G GKTA F + L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + LV+ TRELA Q+++ + R+ Y+S + V +GG L+
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA- 133
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR++ +LDE D+ML ++ DV+ I TP
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEML-TMGFADDVERILSETP 185
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 104 bits (249), Expect = 4e-21
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM--DILCQAKSGMGKTAVFVLATL 442
F + + PEI +AI + G+E+P VQ E IP +LG D++ A++G GKTA F L L
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPY-LLGENNDVVALAQTGTGKTAAFGLPLL 62
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
QQ++ L++C TREL QI+ + +SKY+ G++V +GG I LK
Sbjct: 63 QQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRG 122
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
HI+V TPGR+L ++DE D+ML
Sbjct: 123 V-HIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEML 159
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 104 bits (249), Expect = 4e-21
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Frame = +2
Query: 257 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 436
+ +GF DF IL ++ + G+++P+ +Q IP+ +LG D+L QA++G GKTA F L
Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108
Query: 437 TLQQL-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
+++L + E + VLVM TRELA Q+++ ++ +S + + +GG + L
Sbjct: 109 LIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYAL 168
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHG 793
K +VVGTPGRI+ +LDE D+ML ++ D++ I P
Sbjct: 169 KRKV-DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEML-NMGFLEDIEWIIDQLPKN 226
Query: 794 ETGDDVLSHIE*RNQTCV*KFMQDPMEXYV 883
+ + + + K++ DP E +
Sbjct: 227 KQMVLFSATMPNEIRNIAKKYLNDPAEILI 256
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 104 bits (249), Expect = 4e-21
Identities = 61/176 (34%), Positives = 93/176 (52%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
++ F + L PE L A+ GFEHP+ +Q + IP A+ G D++ A +G GKTA F+L
Sbjct: 3 TTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPL 62
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
+ +L + LV+ TRELA QI +E ERF + VR +V GG+ + + E L+
Sbjct: 63 IDRL-AGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEALRQ 120
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
IV+ TPGR++ +LDE D+ML+ + + + I R P
Sbjct: 121 K-REIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLD-MGFKPQLDRILRRLP 174
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 104 bits (249), Expect = 4e-21
Identities = 54/173 (31%), Positives = 93/173 (53%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L P +L+ + G+E P+ +Q + I Q + G D+L A++G GKTA F L L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ +++ LV+C TRELA Q+++ ++ +++ + V +GG ++ LK P
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQN-P 125
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++VGTPGR++ +LDE D+ML + D+ I +TP
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLR-MGFIEDIDWILEHTP 177
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 104 bits (249), Expect = 4e-21
Identities = 53/168 (31%), Positives = 94/168 (55%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
+ P I +A+ G S +Q + +P A+ G D++ QA++G GKT FV+ L+++E ++
Sbjct: 11 INPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVND 70
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
+++C TRELA Q++++ +K + ++V+ GG P+ + LK + PHI+VG
Sbjct: 71 FSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHS-PHIIVG 129
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
TPGR++ +LDE D+ML+ + D++ I TP
Sbjct: 130 TPGRVMDHVEKRRIDLRNVKLRVLDEADRMLD-MGFEDDLRIIFGQTP 176
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 104 bits (249), Expect = 4e-21
Identities = 59/173 (34%), Positives = 94/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F +F + +I RA+ D GFE + +Q +P + GMD++ +A++G GKTA F + L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
LE +E L++C TREL Q+S+E +R KYM V+V +GG I L+
Sbjct: 66 LE-AERVPQALIICPTRELCLQVSEEIKRIGKYMK-VKVLAVYGGQSIGNQIAQLRRGV- 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++V TPGR++ +LDE D+ML ++ D++ I + P
Sbjct: 123 HVIVATPGRLIDHIERGTVDLGGISTVVLDEADEML-NMGFIDDIERILSHVP 174
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 103 bits (248), Expect = 5e-21
Identities = 60/173 (34%), Positives = 91/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + E + + GF P+ +Q + IPQ + G D++ Q+++G GKTA F L L++
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+P + V +V+ TRELA Q+ +F SG+R +GG I + LK
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSIDRQMLQLKRGV- 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVVGTPGR++ F+LDE D+ML S+ DV++I P
Sbjct: 123 HIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEML-SMGFIDDVEKILSQAP 174
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 103 bits (248), Expect = 5e-21
Identities = 52/157 (33%), Positives = 82/157 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L ++LR I GFE PS +Q + I +LG D+L QA+SG GKT F + LQ+
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++P++ V+++ RELA QI + +Y++ + GG Q+ E K
Sbjct: 118 IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLN-IEAFCCIGGTSTQETREKCKQGV- 175
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
HI++ TPGR++ ++DE D+ML+
Sbjct: 176 HIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLD 212
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 103 bits (246), Expect = 8e-21
Identities = 57/176 (32%), Positives = 90/176 (51%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
++ F L E L + + G+ + VQ +P + G D+ +AK+G GKTA F +
Sbjct: 3 TTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGL 62
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L ++ S+ LV+C TRELA Q+SKE R +++ +++ GG P+ + + L
Sbjct: 63 LDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVH 122
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
A PHIVVGTPGRI +LDE D+ML+ + + ++ TP
Sbjct: 123 A-PHIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLD-MGFTDAIDDVISYTP 176
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 103 bits (246), Expect = 8e-21
Identities = 54/174 (31%), Positives = 92/174 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L P + R I G+ + +E+Q + IP A+ DI+ ++ +G GKT F++ LQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L +++C T ELA QI ++ +F+ Y+ GV ++ GG IQ+ L+ +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-- 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
+I+VGTPGRI +LDE D+ML+ + + D+ ++ +N P+
Sbjct: 121 NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLK-MGFKTDLDKVFQNAPN 173
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 102 bits (244), Expect = 1e-20
Identities = 56/175 (32%), Positives = 89/175 (50%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
SGF F +L+ + D G+ PS +Q P+ +LG D++ QA++G GKTA F L L
Sbjct: 71 SGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLL 130
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
++LE + VLV+ TRELA Q++ ++ ++ ++V +GG + L+
Sbjct: 131 ERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRG 190
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR++ +LDE D+ML + DV+ I P
Sbjct: 191 V-DVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLR-MGFIDDVEWILEQLP 243
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 102 bits (244), Expect = 1e-20
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Frame = +2
Query: 227 KEVKGSYVSIHSSG--FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAK 400
KE K S+G F++F L +L+ + + GF + VQ + IP A+ G D+L ++
Sbjct: 5 KETKIESKDSKSTGTEFQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQ 64
Query: 401 SGMGKTAVFVLATLQQL---EPSESHV------YVLVMCHTRELAFQISKEYERFSKYMS 553
+G GKTA F+L + QL P+ S V VLV+C TRELA Q++ + + M
Sbjct: 65 TGSGKTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMK 124
Query: 554 GVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKM 733
G+R++ GGMP K + LK A +VV TPGR+L ++DE D+M
Sbjct: 125 GIRIATVMGGMPYGKQIQALKGAL--LVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRM 182
Query: 734 LE 739
L+
Sbjct: 183 LD 184
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 102 bits (244), Expect = 1e-20
Identities = 55/173 (31%), Positives = 94/173 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+DF L ++++AI GFE + +Q + IP + D++ QA++G GKTA F + +++
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ P ++ +V+ TRELA Q+S+E + + +V +GG I + LK P
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQ-DKRAKVLPIYGGQDIGRQIRALKKN-P 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+I+VGTPGR+L ++DE D+ML ++ D++ I N P
Sbjct: 123 NIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEML-NMGFIDDIESILSNVP 174
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 101 bits (243), Expect = 2e-20
Identities = 59/168 (35%), Positives = 95/168 (56%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
LK ++L+ I + GFE P+ +Q + IP A+ G+D++ QA++G GKTA F + L ++ E
Sbjct: 11 LKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNRVIKGE 70
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
+ LV+C TRELA Q+++E S+ M ++V +GG I+ L+ P I+VG
Sbjct: 71 G-LQALVLCPTRELAVQVTEEISSLSRRMR-IQVLAIYGGQSIELQLRSLRRN-PEIIVG 127
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
TPGR++ +LDE D+ML+ + D+Q+I P
Sbjct: 128 TPGRLMDHMNRGTISLSPLKYVVLDEADEMLD-MGFLPDIQKILSQCP 174
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 101 bits (243), Expect = 2e-20
Identities = 55/169 (32%), Positives = 87/169 (51%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 460
+L P L + + G+ + VQ +P + G D+ QAK+G GKTA F L LQQ++ S
Sbjct: 9 VLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDAS 68
Query: 461 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
LV+C TRELA Q++ E R ++++ ++ GG P + L+ A PHI+V
Sbjct: 69 LFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHA-PHIIV 127
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
TPGR+L ++DE D+ML+ + + ++ R P
Sbjct: 128 ATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD-MGFSDAIDDVIRFAP 175
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 101 bits (242), Expect = 2e-20
Identities = 59/174 (33%), Positives = 90/174 (51%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +L + F P+ +Q + IP + G D+L +A++G GKTA F L L +
Sbjct: 10 FNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALAK 69
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ S VLV+ TRELA Q+++ E F+ M GV V+ +GG P + LK
Sbjct: 70 IDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGTA 129
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
IVVGTPGR++ +LDE D+ML ++ D++ I + P+
Sbjct: 130 -IVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEML-NMGFIEDIETILKAVPN 181
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 101 bits (242), Expect = 2e-20
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F +F L PE+L +I + P+ +Q IP A+ G DI+ A++G GKTA F + LQ
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + Y LV+ TRELAFQI + ++ M G+R GGM + + L P
Sbjct: 160 LYTAAQPYYALVLAPTRELAFQIKETFDALGSSM-GLRSVCIIGGMSMMEQARDLMRK-P 217
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXRNTP 787
H+++ TPGR++ + ++DE D+M++ LD + + +I + P
Sbjct: 218 HVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMID-LDYAKAIDQILKQIP 270
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 101 bits (241), Expect = 3e-20
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L P ++ AI D GF + + +Q + + + G D + +A++G GKTA F+++ + Q
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 449 L----EPSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L P E ++ L++ TREL QI+K+ +KY +G+ V F GGM K +
Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMTFVGGMDFDKQLK 129
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ I+V TPGR+L +LDE D+ML+ + V++I R TP
Sbjct: 130 QLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLD-MGFIPQVRQIIRQTP 188
Query: 788 H 790
H
Sbjct: 189 H 189
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 100 bits (240), Expect = 4e-20
Identities = 55/172 (31%), Positives = 93/172 (54%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L E+ +A+ D G++ P+ +Q + IP A+ G DIL QA +G GKT F + +++L+ +
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
V LV+ TRELA Q+ ++ +KY + VF+GG ++++ ++L+ I++G
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKY-KRLSSYVFYGGTSVKQNLDILQNKNVDILIG 125
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGET 799
TPGRI +LDE D+ML+ + D++ I P T
Sbjct: 126 TPGRIKDLIDRKALNLSKVEYLVLDEFDQMLD-MGFIEDIEYIISFLPKERT 176
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 100 bits (240), Expect = 4e-20
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Frame = +2
Query: 209 TEVAPKKEVKGSYVSIH---SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM 379
+E +P +K S H + GF F LK +L+ I + GF PS VQ + IP + G
Sbjct: 24 SEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGK 83
Query: 380 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 559
D++ QA++G GKTA F + L L ++ + L++ TRELA QIS+E + ++ +
Sbjct: 84 DLIAQAQTGTGKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRF-GRI 141
Query: 560 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+ +GG I++ ++L+ P ++ TPGR+L +LDE D+ML+
Sbjct: 142 KTICMYGGQSIKRQCDLLEKK-PKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLD 200
Query: 740 SLDMRRDVQEIXRNTPH 790
+ D++EI + P+
Sbjct: 201 -MGFLDDIEEIFKFLPN 216
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 100 bits (239), Expect = 6e-20
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+GF F L P ++ A+ D + P+++Q IP A+ G DI+ Q+++G GKT F+L +
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYER-FSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
Q + P + +++ TRELA+QI +E + K ++ S+ GGM ++ +K
Sbjct: 62 QNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKV 121
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGET 799
+ P IV+GTPGRIL +I+DE D+ML+ + +V I + P
Sbjct: 122 S-PQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLD-MGFLPEVDRIAQALPEKLQ 179
Query: 800 GDDVLSHIE*RNQTCV*KFMQDPMEXYV 883
+ I + Q + K+M +P +V
Sbjct: 180 MMVFSATIPEKLQPFLKKYMNNPRYAHV 207
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 100 bits (239), Expect = 6e-20
Identities = 62/157 (39%), Positives = 87/157 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF LK I A+ + GF+ PS VQ + IP + G D++ QA++G GKTA F L +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ ++ V LV+ TRELA Q+S E RF K +SG++ + +GG K E +K A
Sbjct: 63 MK-ADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQIERIKQA-- 118
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
IVV TPGR L +LDE D+ML+
Sbjct: 119 SIVVATPGR-LQDLLMSGKIKLNPHFVVLDEADEMLD 154
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 100 bits (239), Expect = 6e-20
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
SS F D L P +L+A+ F+ P+ VQ + IP A+ G D+L +AK+G GKTA +VL
Sbjct: 42 SSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPI 101
Query: 440 LQ------QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMS-GVRVSVFFGGMPIQK 598
LQ Q+ P +++ L++ TREL Q++KE ERFS + + V+V +
Sbjct: 102 LQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVGLTDKVSDAV 161
Query: 599 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
+L+++ P IVV TP +LDE D +L S D++++ R
Sbjct: 162 QRSLLQSSSPDIVVSTPSTAWRNVDSGALSLDKLTHLVLDEADLVL-SYGYDEDLEKVAR 220
Query: 779 NTPHG 793
P G
Sbjct: 221 GLPKG 225
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 99 bits (238), Expect = 8e-20
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 460
L+P I + + GF+ PS +Q + IP + DI+ QA++G GKTA F L +Q++EP
Sbjct: 9 LEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPG 68
Query: 461 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
L++C TRELA Q+++E + F K G+ +GG PI + LK +VV
Sbjct: 69 LKKPQALILCPTRELAIQVNEEIKSFCK-GRGITTVTLYGGAPIMDQKRALKKGV-DLVV 126
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGET 799
TPGR + +LDE D+ML ++ DV+++ + +P T
Sbjct: 127 ATPGRCIHFIEDGKLELDSLEYLVLDEADEML-NMGFVEDVEKVLKASPDDRT 178
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 99.5 bits (237), Expect = 1e-19
Identities = 52/156 (33%), Positives = 85/156 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F ++ L E+ RA+ G+EHP+EVQ E IP A+ D++ ++++G GKTA F + +
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+E E+ LV+ TRELA Q+ ++ ++ ++ + +G P + + LK
Sbjct: 66 VEWEENKPQALVLTPTRELAVQVKEDITNIGRF-KRIKAAAIYGKSPFARQKLELKQK-T 123
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
HIVVGTPGR+L ++DE D+ML
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEML 159
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 99.1 bits (236), Expect = 1e-19
Identities = 61/173 (35%), Positives = 88/173 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF LK +++ +V GF P+ +Q + IP + G D++ QA++G GKTA F L L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ S+ V LV+ TRELA Q+ +S G V V +GG Q L+
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSG-DDGRNVLVVYGGSSYQAQVGGLRRGA- 174
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR+L +LDE D+ML S+ D++ I TP
Sbjct: 175 RVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEML-SMGFIDDIETILSQTP 226
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 99.1 bits (236), Expect = 1e-19
Identities = 56/173 (32%), Positives = 90/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +L A++ GF +++Q IP + G D+L +A++G GKTA F L L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ S ++V+ TRELA Q+++ E F K M G+RV+ +GG + L+
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGA- 135
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR++ +LDE D+ML ++ D+Q I + P
Sbjct: 136 QVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEML-NMGFLEDIQWILDHIP 187
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 99.1 bits (236), Expect = 1e-19
Identities = 56/157 (35%), Positives = 87/157 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ L +L+A+ D GFE P+ +Q E IP + G +++ QA +G GKTA ++L LQ+
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + VL++ TRELA Q++ E + KY+ VR +GG I++ L+
Sbjct: 64 IQRGKK-AQVLIVTPTRELALQVADEVAKLGKYLK-VRALAVYGGQAIERQIRGLRQGV- 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
++VGTPGRIL ILDE D+ML+
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLD 157
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 99.1 bits (236), Expect = 1e-19
Identities = 57/175 (32%), Positives = 89/175 (50%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F L IL + G+E PS +Q +CI + DI+ QA++G GKTA FVL L
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL 71
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
++ + + +L++ TRELA Q+S+ + +++ M G V +GG LK
Sbjct: 72 DKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRG 131
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H +VGTPGR++ F+LDE D+ML+ + D++ I + P
Sbjct: 132 V-HAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLK-MGFIDDIKWIMQRIP 184
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 99.1 bits (236), Expect = 1e-19
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L E++ AI D GF + + +Q + + + G D + +A++G GKTA F+++ + Q
Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70
Query: 449 LE----PSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L+ P E ++ L++ TREL QI+K+ +KY +G+ V F GGM K +
Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMSFVGGMDFDKQLK 129
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ I+V TPGR+L +LDE D+ML+ + V++I R TP
Sbjct: 130 ALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLD-MGFIPQVRQIIRQTP 188
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 98.7 bits (235), Expect = 2e-19
Identities = 62/177 (35%), Positives = 89/177 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L EI++A+ + P+ +Q + IP A+ G DI+ ++K+G GKTA F + +
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ E+ LV+ TRELA+Q+ E + M V+V V FGG P K LK
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGR-MKRVKVPVVFGGFPFDKQALTLKQK-S 123
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGET 799
HIVVGTPGR+L I+DE D ML+ + DV+ I P T
Sbjct: 124 HIVVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLD-MGFLDDVKRILSYLPENIT 179
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 98.7 bits (235), Expect = 2e-19
Identities = 56/168 (33%), Positives = 87/168 (51%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L P + A + G++ VQ +P G D++ Q+++G GKT F+L L++L+P+E
Sbjct: 44 LAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAE 103
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
+ LV+ TRELA Q+ E + +G+RV+ +GG+ K + L+ H VVG
Sbjct: 104 ASTQALVLVPTRELALQVEHEARTLFE-GTGLRVAAVYGGVGYGKQNDALREGA-HFVVG 161
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
TPGR+L DE D+ML S+ D++EI R P
Sbjct: 162 TPGRVLDHLLRRTMQLDRLRALTFDEADRML-SIGFYPDMKEIQRYLP 208
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 98.7 bits (235), Expect = 2e-19
Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +2
Query: 230 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 409
+VKGS V S G LK E+L + GF+ + VQ IP + D++ +AK+G
Sbjct: 15 DVKGSGVLFSSLG-----LKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGT 69
Query: 410 GKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV--RVSVFFGG 583
GKT F++ LQ + P++ H+ LV+ HTRELA Q +K + SK M V R+ GG
Sbjct: 70 GKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGG 129
Query: 584 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
+ I +D E + P +V+ TPGR+ +LDE D +L
Sbjct: 130 VSIAEDRERAREK-PLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLL 179
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 98.7 bits (235), Expect = 2e-19
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + P+I+ A + GF+HP+ +Q + IP+A+ D++ A++G GKTA F + LQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + + V+ TRELA+QIS++ E + GVR + GGM + + + + P
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTI-GVRSATIVGGMDMM-SQSIALSKRP 223
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXRNTP 787
H++V TPGR+ + ++DE D++L+ +D + ++ ++ P
Sbjct: 224 HVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLD-MDFGPIIDKLLQSIP 276
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 98.7 bits (235), Expect = 2e-19
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L P+ILRA+ + G+ P+ +Q + IP + G D++ A++G GKTA F L LQ L +
Sbjct: 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ 67
Query: 464 SH------VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
H V L++ TRELA QI + +SKY++ +R V FGG+ I L+
Sbjct: 68 PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMKLRGGV 126
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++V TPGR+L +LDE D+ML+ + D++ + P
Sbjct: 127 -DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD-MGFIHDIRRVLTKLP 178
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 98.7 bits (235), Expect = 2e-19
Identities = 62/200 (31%), Positives = 92/200 (46%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L+ ++LR I GFE PS +Q I Q + G D++ Q++SG GKTA F ++ LQ L+
Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV 104
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 105 RETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYG-QHVVAG 162
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSHI 823
TPGR+ +LDE D+ML + + ++ R P + + +
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 221
Query: 824 E*RNQTCV*KFMQDPMEXYV 883
KFM DP+ V
Sbjct: 222 PHEILEMTNKFMTDPIRILV 241
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 427
VS H+ F + L +LRA G++ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAF 221
Query: 428 VLATLQQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 598
L TL++L V+ VL++ TRELA QI + +++ + ++ + GG+ +++
Sbjct: 222 ALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQF-TDIKCGLIVGGLSVRE 280
Query: 599 DEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIX 775
E VL+ + P IVV TPGR++ ILDE D++L++ ++ E+
Sbjct: 281 QEVVLR-SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQT-GFATEITELV 338
Query: 776 RNTP 787
R P
Sbjct: 339 RLCP 342
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 97.9 bits (233), Expect = 3e-19
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L I +A+ + G++ PS +Q + IP + G D++ A++G GKTA F L L+
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 449 LEPSES----HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L + LV+ TRELA Q+S+ E + KY+ +R +V FGG+PI + L+
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLR 121
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++V TPGR+L +LDE D+ML+ + RD+++I P
Sbjct: 122 HGV-DVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLD-MGFIRDIKKILAMLP 176
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 97.9 bits (233), Expect = 3e-19
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S+ F D L + RA+ GF+ PS VQ C+P G D++ QAKSG GKT FV+
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEY-ERFSKY-------MSGVRVSVFFGGMPIQ 595
L++++ L + TRE A Q + + E K+ G+ + GG+P++
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 596 KDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 763
+D L + PH+VVGTPGR ILDE D +L S RDV
Sbjct: 156 EDRARLASQ-PHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALL-SGTFERDV 209
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 97.5 bits (232), Expect = 4e-19
Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L I+RAI + G+EHP+ +Q + IP+ + G D+L A++G GKTA F L LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 449 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L S + + L++ TRELA Q+++ ++ + KY+ + ++ GG + + +VL
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLR-LTHALLIGGESMAEQRDVLNR 411
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP-HGE 796
+++ TPGR+L ++DE D+ML+ + D+++I P H +
Sbjct: 412 GV-DVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLD-MGFIPDIEKIVALLPAHRQ 469
Query: 797 T 799
T
Sbjct: 470 T 470
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 97.5 bits (232), Expect = 4e-19
Identities = 55/200 (27%), Positives = 103/200 (51%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
+ EI + P+ VQ + IP + D++ QA++G GKT F+L L+++ +
Sbjct: 10 ISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEK 69
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 643
+ L++ TRELA QI+ E ++ ++ + G+ + +GG +++ LK + HI++G
Sbjct: 70 PTIQALIITPTRELAIQITAETKKLAE-VKGINILAAYGGQDVEQQLRKLKGSI-HIIIG 127
Query: 644 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSHI 823
TPGR+L +LDE D+ML + RDV++I + P + +
Sbjct: 128 TPGRLLDHLRRKTINLGKLSMLVLDEADQMLH-MGFLRDVEDIMTHIPKRRQNMFFSATM 186
Query: 824 E*RNQTCV*KFMQDPMEXYV 883
+ +T ++M+DP++ V
Sbjct: 187 PNQVRTLAEQYMKDPVQIQV 206
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 97.5 bits (232), Expect = 4e-19
Identities = 56/170 (32%), Positives = 84/170 (49%)
Frame = +2
Query: 230 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 409
E+ G V+ + D L E+++AI G+ + VQ IP + D++ +A +G
Sbjct: 2 EINGEQVN-EVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGT 60
Query: 410 GKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP 589
GKT F + ++ ++P V LV+ TRELA QI E ++ GVR +GG P
Sbjct: 61 GKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAP 120
Query: 590 IQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
I+K LK P IVV TPGR++ +LDE D+ML+
Sbjct: 121 IEKQITTLKKH-PQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLD 169
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 97.5 bits (232), Expect = 4e-19
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L ++RAI + G+E+ S +Q +P A+ G D + +A++G GKTA F++ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 449 -LEPSESHVYV-----LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
LE YV L++ TRELA QI+++ + +KY S ++V+ GGM K ++
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKY-SRLKVAAVVGGMDFDKQKQQ 147
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
L I+V TPGR++ I+DE D+ML+ + D++ I R TP
Sbjct: 148 LHEQRTDILVATPGRLIDFMNRKAVFLDQIEMLIIDEADRMLD-MGFIPDIKTIVRATPR 206
Query: 791 GETGDDVL 814
E +L
Sbjct: 207 TENRQTLL 214
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 97.5 bits (232), Expect = 4e-19
Identities = 47/173 (27%), Positives = 87/173 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L +L + F P+++Q IP A+ MD++ Q+KSG GKT ++V+A +Q
Sbjct: 27 FEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQS 86
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
P+ + + +++ TRELA Q+ + K + S F GG + KD + + +
Sbjct: 87 FNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-- 144
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+++GTPGR+L +LDE D++ ++ ++ V ++ P
Sbjct: 145 RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMP 197
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 97.1 bits (231), Expect = 5e-19
Identities = 56/178 (31%), Positives = 90/178 (50%)
Frame = +2
Query: 254 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 433
+ S F + L IL + G+E PS +Q + IP + G D+L QA++G GKTA F L
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 434 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L +L+ VLV+ TRELA Q++ + ++ + + G+ V GG ++ L
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGL 125
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ ++VGTPGR++ +LDE D+ML + DV+ + +TP
Sbjct: 126 RRGA-QVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLR-MGFIDDVKRVVSDTP 181
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 96.7 bits (230), Expect = 7e-19
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L EIL A+ D G+ +P+ +Q + IP + G D++ A++G GKTA F L L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 449 LE--------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
L+ P+ V L+M TRELA QI + ++ KY++ +R +V FGG+ I+
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLA-LRTAVVFGGINIEPQI 125
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
L+ A I+V TPGR+L +LDE D+ML+
Sbjct: 126 AALQ-AGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLD 169
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 96.7 bits (230), Expect = 7e-19
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 3/210 (1%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+ F D L I+ + + G++ P +Q +CIP + G D+L A +G GKTA F+L L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG-VRVSVFFGGMPIQKDEEVLKT 619
Q ++ + V L++ TRELA QI F K +S + ++V +GG + LK
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKK 125
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP-HGE 796
PHI++GTPGR+L I+DE D+ML + D++ I R P H +
Sbjct: 126 N-PHIIIGTPGRLL-DHLSRGLDISKLKTLIIDEADEMLR-MGFIEDIEHIIRYVPTHRQ 182
Query: 797 TG-DDVLSHIE*RNQTCV*KFMQDPMEXYV 883
T + R + KFM +P E Y+
Sbjct: 183 TALFSATLPVSIRKLSY--KFMCNPKEIYI 210
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 96.7 bits (230), Expect = 7e-19
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + IL A+ G+ HP+ +Q E IP A+ G D+L A++G GKTA FV+ L +
Sbjct: 46 FTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDR 105
Query: 449 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + S L++ TRELA Q+ +SK M G+ GG P LK
Sbjct: 106 LSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKK 165
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++V TPGR+L +LDE D+ML+ + D+ +I R P
Sbjct: 166 GV-QVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLD-MGFADDISDILRAAP 219
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 96.7 bits (230), Expect = 7e-19
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L I +A+ + G++ PS +Q + IP + G D++ A++G GKTA F L L+
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 449 LEPSES----HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L + LV+ TRELA Q+S+ E + KY+ +R +V FGG+PI + L+
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLR 121
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++V TPGR+L +LDE D+ML+ + RD+++I P
Sbjct: 122 HGV-DVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLD-MGFIRDIKKILALLP 176
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 96.7 bits (230), Expect = 7e-19
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAV-LGMDILCQAKSGMGKTAVFVLATLQ 445
F DF L EIL AI G+E P+E+Q +P A+ D++ QA++G GKTA F + L+
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 446 QLE-PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
+++ + V +++ TRELA QI +E + K V+++ +GG ++K + L+
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSL-KGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
IVVGTPGRI+ +LDE D+ML+ + DV EI + T
Sbjct: 139 V-DIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLD-MGFLDDVLEIIKRT 190
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 96.7 bits (230), Expect = 7e-19
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F L P++ AI G+ P++VQ IPQA+ G D+L A++G GKTA ++L L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 449 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
+ ++ + VLVM TRELA Q+ K+ E ++ +G++ + GG Q +L+
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELAQQVMKDCEALTQ-QTGLKTVIIRGGQEFQYQASLLRR 120
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
P IV+ TPGR+ +LDECD+ML+
Sbjct: 121 N-PEIVIATPGRMTEHLNKNSTDLLDVECLVLDECDRMLD 159
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 96.7 bits (230), Expect = 7e-19
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Frame = +2
Query: 251 SIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV 430
+I S+ F L E++ A+ G+E+P+ +Q IP+A+ G D+L A++G GKTA F+
Sbjct: 25 TIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFM 84
Query: 431 LATLQQLE--------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 586
L +L++L+ P+ V +LV+ TRELA QI + + + K + +R +V FGGM
Sbjct: 85 LPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLP-LRHTVLFGGM 143
Query: 587 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 766
+ K L+ C IVV T GR+L +LDE D+ML+ + D++
Sbjct: 144 NMDKQTADLRAGC-EIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLD-MGFIDDIR 201
Query: 767 EIXRNTP 787
+I + P
Sbjct: 202 KIMQMLP 208
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 96.3 bits (229), Expect = 9e-19
Identities = 54/156 (34%), Positives = 79/156 (50%)
Frame = +2
Query: 320 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 499
G + +Q + IP + G DI+ QAK+G GKT FVL L++++P S V L++ TR
Sbjct: 24 GITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTR 83
Query: 500 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 679
ELA QI+ E ++ + V +GG + + LK HIVV TPGR+L
Sbjct: 84 ELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK-GNTHIVVATPGRLLDHIRRE 142
Query: 680 XXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+LDE D+ML D+++I TP
Sbjct: 143 TIDLSNLSTIVLDEADQML-YFGFLYDIEDILDETP 177
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 96.3 bits (229), Expect = 9e-19
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Frame = +2
Query: 209 TEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 388
T+ + VK S + + F F L P L+AI D GFE + VQ +P + G D+L
Sbjct: 364 TDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVL 423
Query: 389 CQAKSGMGKTAVFVLATLQQL--EPSESH------VYVLVMCHTRELAFQISKEYERFSK 544
+AK+G GKT F+L ++ + P S + VLV+C TRELA Q + E K
Sbjct: 424 AKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLK 483
Query: 545 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI---LAXXXXXXXXXXXXXXFIL 715
Y + V V GG + ++ ++T I+V TPGR+ + +L
Sbjct: 484 YHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVL 543
Query: 716 DECDKMLESLDMRRDVQEIXRNTP 787
DE D +L+ + RRD++ I P
Sbjct: 544 DEADHLLD-MGFRRDIERIIAAVP 566
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 95.9 bits (228), Expect = 1e-18
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L P + RA+ D GF PS +Q IP A+ G D++ QA++G GKTA F + L+Q
Sbjct: 46 FDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQ 105
Query: 449 LEPSES--HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
L+ E +V+ TRELA Q++ E ER ++ + ++V GG + + L+
Sbjct: 106 LDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVP-TEIAVLSGGKNMNRQLRQLENG 164
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR+ +LDE D+ML+ + R ++ I R P
Sbjct: 165 -TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLD-IGFRPQIERIMRKCP 217
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 95.9 bits (228), Expect = 1e-18
Identities = 57/171 (33%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 460
L++P IL+A+ G+ P+ +Q + IP + G D+L A++G GKTA F + LQ+L +
Sbjct: 8 LIEP-ILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQKLYKT 66
Query: 461 ESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
+ + LV+ TRELA QI + +E + +Y +G++ +V FGG+ + + L++ I
Sbjct: 67 DHRKGIKALVLTPTRELAIQIGESFEAYGRY-TGLKHAVIFGGVGQKPQTDALRSGI-QI 124
Query: 635 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+V TPGR+L F+LDE D+ML+ + D++ I + P
Sbjct: 125 LVATPGRLLDLISQGFISLSSLDFFVLDEADRMLD-MGFIHDIKRILKLLP 174
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 95.9 bits (228), Expect = 1e-18
Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S GF LL P LRAI D G+ P+ +Q + IP +LG D++ A++G GKTA F L
Sbjct: 5 SLGFSPALL-PAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPM 63
Query: 440 LQQLEPSES----HVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDE 604
LQQL + + L++ TRELA Q+ + F+KY+ V+V+V FGG+ I
Sbjct: 64 LQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQM 123
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
L+ IVV TPGR+L +LDE D++L+
Sbjct: 124 MNLRGGA-DIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLD 167
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 95.9 bits (228), Expect = 1e-18
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAVFVLATLQ 445
F D L +L+++ + PSE+Q + IP + +++ A++G GKTA F L LQ
Sbjct: 3 FSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQ 62
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
Q+ PS VLV+ TREL Q++K+ FS+Y+ + +GG I++ + L+T
Sbjct: 63 QINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP- 121
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
HI+V TPGR+L ILDE D+ML ++ D+ +I +
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEML-NMGFLPDIDKIMK 171
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 95.9 bits (228), Expect = 1e-18
Identities = 57/210 (27%), Positives = 106/210 (50%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F D+ L E+L++I FE P++VQ + IP + DI+ ++++G GKTA F +
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
Q ++ E+ LV+ TRELA Q+ ++ ++ ++V+ +G P E+ LK
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF-KRLKVAAVYGKAPFYHQEKELKQK 122
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETG 802
H+VVGTPGRI+ ++DE D+M ++ ++ I ++
Sbjct: 123 -THVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMF-NMGFVDQIETIIKDLSKKRVT 180
Query: 803 DDVLSHIE*RNQTCV*KFMQDPMEXYVXDE 892
+ + + +T ++M+DP+ + +E
Sbjct: 181 MLLSATMPSAIETLSNRYMKDPIHAEIEEE 210
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 95.9 bits (228), Expect = 1e-18
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Frame = +2
Query: 236 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 415
KG + ++D L P IL I CG++ P+ +Q + IP + DI+ A++G GK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441
Query: 416 TAVFV---------LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 568
TA F+ L + ++E S+ Y +++ TRELA QI +E +F K + G+R
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL-GIRTV 500
Query: 569 VFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLD 748
GG+ + L+ C IV+ TPGR++ +LDE D+M++ +
Sbjct: 501 AVIGGISREDQGFRLRMGC-EIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID-MG 558
Query: 749 MRRDVQEIXRNTP 787
DVQ+I + P
Sbjct: 559 FEPDVQKILEHMP 571
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 95.5 bits (227), Expect = 2e-18
Identities = 56/189 (29%), Positives = 93/189 (49%)
Frame = +2
Query: 221 PKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAK 400
P K V + + F L + A+ + G+ P+ +Q + +P + G D+ A+
Sbjct: 119 PIKPVTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
Query: 401 SGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFG 580
+G GKTA F L L +L E + LV+ TRELA Q+ + ++++SKY + + +V +G
Sbjct: 179 TGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY-TDLTATVVYG 237
Query: 581 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRD 760
G+ K E L+ +V TPGR+L +LDE D+ML+ + D
Sbjct: 238 GVGYGKQREDLQRGV-DVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLD-MGFLPD 295
Query: 761 VQEIXRNTP 787
V+ I + P
Sbjct: 296 VKRIVQQCP 304
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 95.5 bits (227), Expect = 2e-18
Identities = 54/173 (31%), Positives = 85/173 (49%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L P +L A+ G+E PS +Q + IP + G +L A++G GKTA F L L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + + +LV+ TRELA Q+++ + ++ V +GG LK
Sbjct: 86 IDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA- 144
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++VGTPGR+L +LDE D+ML + DV+ I TP
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLR-MGFIDDVEAILAKTP 196
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 95.5 bits (227), Expect = 2e-18
Identities = 57/173 (32%), Positives = 80/173 (46%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +LR + F HPS +Q IP A LG+D+L QAKSG GKT VF + +
Sbjct: 24 FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTGKTLVFTVLITEN 83
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
P L + TRE+A QI R + R F GG+ I +D + L++
Sbjct: 84 HNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDISQDRKNLQSC-- 141
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
VVGTPGRI +LDE D ++ ++ +V +I + P
Sbjct: 142 SAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITG-SLKPEVDQIVKMLP 193
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 95.1 bits (226), Expect = 2e-18
Identities = 54/157 (34%), Positives = 85/157 (54%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F +K EIL+++ + GFE P+++Q +P A G DI+ QA++G GKTA F + L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+ S + + LV+ TRELA QI + KY ++++ GG+ +K + L +
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVSYEKQKAALNSGV- 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+IVV TPGR+ F LDE D++L+
Sbjct: 121 NIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLK 157
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 94.7 bits (225), Expect = 3e-18
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + LKP I+ A+ GF P+++Q IP + ++ Q+++G GKT ++L L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG--VRVSVFFGGMPIQKDEEVLKTA 622
++P++ V V++ TRELA QI +E + ++ G +R F GG QK + LK
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PH+VVGTPGRI ++DE D ML+ + DV I P
Sbjct: 126 -PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLD-MGFLADVDYIGSRMP 178
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 94.7 bits (225), Expect = 3e-18
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D L +L+AI GF+ P+ +Q CIP +LG DI A +G GKTA F L L++
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 449 L--EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +P ++ V VLV+ TREL Q+ + +++ + + + GG+ ++ E L+
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCN-ITTCLAVGGLDVKSQEAALR- 337
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
A P I++ TPGR++ ILDE D+ML+ ++EI R H
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY-FEEQMKEIIRMCSH 394
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 94.3 bits (224), Expect = 4e-18
Identities = 54/156 (34%), Positives = 83/156 (53%)
Frame = +2
Query: 275 DFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE 454
DF+ KP I A FE VQ + IP D+L +A +G GKT +V+ L+ ++
Sbjct: 2 DFM-KPFITEAWERARFEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELID 60
Query: 455 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
+E H+ V++ TREL QI + + FS+ SG++ F GG+ +++ E LK P I
Sbjct: 61 ENEPHIQVVITAPTRELVMQIHQVIQLFSQ-GSGIKSGAFIGGVELKRQHERLKKK-PQI 118
Query: 635 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES 742
+VGTPGR++ +LDE D++ ES
Sbjct: 119 IVGTPGRLVELIDSKKMKMHKVKLIVLDEADQIYES 154
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 94.3 bits (224), Expect = 4e-18
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L P +L+A+ + GF P+ +Q + IP A+ G D++ A +G GKTA F+L L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 449 L-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
L + LV+ TRELA QI ++ + + + + + FGG+ I+ E +
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVH-TPISAAAVFGGVSIRPQEHAFRRGV 121
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+++GTPGR+L +LDE D+ML+ + D++ I ++ P
Sbjct: 122 D-VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLD-MGFLPDIRRILKHIP 173
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 94.3 bits (224), Expect = 4e-18
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L P++ +AIV+ G+E P+ +Q IP A+ G D+L A++G GKTA F L +
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 449 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + + LV+C TRELA Q+++ ++ ++K++ + ++ GG+ ++ E+ +
Sbjct: 73 LARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVK-LTKALLIGGVSFKEQEQAIDK 131
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+++ TPGR+L ++DE D+ML+ + D++ I P
Sbjct: 132 GV-DVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLD-MGFIPDIERIFGLVP 185
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 94.3 bits (224), Expect = 4e-18
Identities = 52/168 (30%), Positives = 88/168 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F L+ ++ A+ D FE P+E+Q+ IP+ + +++ Q+++G GK+ F+L +Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ +V+ TRELA Q+ S++ +GV V VF GG I+KD + A P
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC-NAQP 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
+++GTP RI ++DE D M++ L + DV I
Sbjct: 125 QLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMID-LGLIEDVDYI 171
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 94.3 bits (224), Expect = 4e-18
Identities = 51/157 (32%), Positives = 82/157 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + IL+AI D GF+ P+EVQ + IP + D++ +K+G GKTAVF ++ LQ
Sbjct: 5 FNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQL 64
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
P E+ L++ RELA Q+ + + +KY+ + + +G I + ++L
Sbjct: 65 TNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKH-KTTAIYGQHNINLETQILNKGV- 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
IV GTPGR+ +LDE D+ML+
Sbjct: 123 SIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLD 159
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 94.3 bits (224), Expect = 4e-18
Identities = 51/161 (31%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +L+ + G+ PS +Q IP A+LG DI+ A +G GKTA F++ +++
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 449 L--EPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +P++ + V+V+ TRELA Q++ ++ ++++SG+ + GG+ +++ E++LK+
Sbjct: 293 LLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKS 352
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLE 739
P IV+ TPGR + ++DE D+MLE
Sbjct: 353 R-PDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLE 392
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 93.9 bits (223), Expect = 5e-18
Identities = 55/173 (31%), Positives = 85/173 (49%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F L +IL+++ G+ PS VQ E IP+ + G +++ ++K+G GKTA F + +
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ +++ L++ TRELA Q+ E + + VR S FG I+ LK
Sbjct: 65 INVDYNNIQALIVVPTRELALQVKDEISDIGR-LKKVRCSAIFGKQSIKDQIAELKQRV- 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVV TPGRIL ++DE DKM +++I N P
Sbjct: 123 HIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNK-GFVEQMEKILLNLP 174
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 93.9 bits (223), Expect = 5e-18
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + EIL +I + G++ P+E+Q E +P A L DI+ +++G GKTA F++ LQ
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQD 217
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+ ++ Y LV+ TREL QIS+ ++ + + + +GG+ I L P
Sbjct: 218 LKVNKQSFYALVISPTRELCIQISQNFQALGMNLL-INICTIYGGVDIVTQSLNLAKK-P 275
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEI 772
+++V TPGRIL + + DE DK+L S D + ++
Sbjct: 276 NVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLL-SQDFESSINKL 323
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 93.9 bits (223), Expect = 5e-18
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D + + A G+ P+++Q E IP A+ G DI+ A++G GKT F L L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + ++ LV+ TRELAFQIS+++E + GV+ +V GG+ L P
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXRNTP 787
HI++ TPGR++ + ++DE D++L ++D +V +I + P
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIP 196
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 93.5 bits (222), Expect = 7e-18
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L E+L+A+ + G+E P+ VQ IP ++ D++ A++G GKTA FVL +
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDI 62
Query: 449 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + L++ TRELA Q+++ +E++ KY + +S+ GG+P+ + + L+
Sbjct: 63 LAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHK-LSMSLLIGGVPMAEQQAALEK 121
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+++ TPGR+L ++DE D+ML+ + D++ I P
Sbjct: 122 GV-DVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLD-MGFIPDIETICTKLP 175
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 93.5 bits (222), Expect = 7e-18
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
+S F + L PE+ + + G+E P+ +Q + IP + G D+L +A++G GKTA F L
Sbjct: 3 ASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPI 62
Query: 440 LQQL--EPSESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
+++L P + + V LV+ TRELA Q++ + + + G+RV +GG+P++ +
Sbjct: 63 IEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDL-GMRVISVYGGVPVENQIK 121
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
LK I+V TPGR+L +LDE D+ML+
Sbjct: 122 RLKRG-TDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLD 164
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 93.5 bits (222), Expect = 7e-18
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+DF LKPEIL A+ G P+ +Q +P A+ G D++ QA++G GKT F L ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 449 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L PS+ LV+ TRELA Q++ E + ++ V V +GG K +E L
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAV---YGGTGYGKQKEALLR 119
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
VV TPGR L +LDE D+ML S+ +V+ + TP
Sbjct: 120 GA-DAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEML-SMGFEEEVEALLSATP 173
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 93.5 bits (222), Expect = 7e-18
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 442
F D L I +AI + F P+ VQ + IP + +++ A++G GKTA F L +
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 443 ----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
Q E E + LV+ TRELA QI + ++ +SKY S +R + FGG+ ++ +E+
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKY-SNLRSTAVFGGVSLEPQKEI 121
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L I+V TPGR++ F+LDE D ML+ + D+++I + P
Sbjct: 122 LAKGV-DILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLD-MGFINDIKKIEKLCP 178
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 93.5 bits (222), Expect = 7e-18
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAVFVLATLQ 445
F++ L EIL A+ GF P+ +Q + IP + G DI+ QA++G GKTA F + L+
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
++ S + L++ TRELA Q+++E + K + V +GG I + L+
Sbjct: 64 TIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN 781
IVVGTPGRIL +LDE D+ML ++ DV+EI ++
Sbjct: 123 -QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEML-NMGFIDDVEEILKS 172
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 93.5 bits (222), Expect = 7e-18
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F F L PE+L+A+ G+ P+ +Q E IP A+ D+L A +G GKTA F+L L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 443 QQL----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
Q L +LV+ TRELA Q++++ E +++ + + ++ GG+ Q +V
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQF-THLNIATITGGVAYQNHGDV 122
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
T +VV TPGR+L I DE D+ML+ + +D ++I T
Sbjct: 123 FNTN-QDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQ-MGFGQDAEKIAAET 178
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 93.1 bits (221), Expect = 9e-18
Identities = 52/173 (30%), Positives = 84/173 (48%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L P +L + + G++ + VQ +P + D + +A +G GKT F L L +
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLLAK 82
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
LE LV+C TRELA Q++ E + +K M +++ GG P + L+
Sbjct: 83 LEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGA- 141
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++VGTPGR+L +LDE D+MLE + + + I ++ P
Sbjct: 142 HVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLE-MGFQDSLNAIVKHIP 193
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 93.1 bits (221), Expect = 9e-18
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L E +R+I + G+ P+ +Q IP+ + G DI+ A++G GKTA F+L ++
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIEL 85
Query: 449 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L +P V+ LV+ TRELA Q+ + ++KY++ +R FGG+ I+ + L+
Sbjct: 86 LRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLA-LRSDAVFGGVSIRPQVKRLQ 144
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR+L +LDE D+ML+ + RD++++ P
Sbjct: 145 GGV-DILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLD-MGFIRDIKKVIEYLP 199
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 93.1 bits (221), Expect = 9e-18
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVFVLAT 439
S F ++ + +++I + G P+++Q + IP + D + A++G GKTA F L
Sbjct: 2 STFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPV 61
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG-VRVSVFFGGMPIQKDEEVLK 616
L ++ + H+ L++ TREL QI K+ +F+KY+ + + FGG I + LK
Sbjct: 62 LHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLK 121
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
HIV+ TPGR++ ILDE D+ML S+ ++D+ I + T
Sbjct: 122 RT-THIVIATPGRLIDLIERGAVDISHVKTVILDEADEML-SMGFKQDLNRILKFT 175
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 92.7 bits (220), Expect = 1e-17
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Frame = +2
Query: 203 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 382
G+T + KE + + S G L P ++ A+ G+E P+ +Q +P + G D
Sbjct: 21 GATSPSTVKETSAADNTFESLG-----LLPPLVEALSALGYEEPTPIQRAALPPLLEGKD 75
Query: 383 ILCQAKSGMGKTAVFVLATLQQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMS 553
+L A +G GKTA F L LQ++ P + LV+ TRELA Q+++ R+ + +
Sbjct: 76 LLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKL- 134
Query: 554 GVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKM 733
G+ V +GG I + VLK +VV TPGR L +LDE D+M
Sbjct: 135 GISVVPLYGGQVISQQLRVLKRGV-DVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEM 193
Query: 734 LESLDMRRDVQEIXRNTP 787
L+ + D++ I +TP
Sbjct: 194 LD-MGFAEDLEAILSSTP 210
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 92.7 bits (220), Expect = 1e-17
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +I+ ++ G+E+P+ +Q IP + G D+L QA++G GKTA F L +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 449 LE--PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
++ + VLV+ TRELA Q+++++E F+K + + V+ +GG LK
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
+VVGT GR++ +LDE D+ML
Sbjct: 129 V-KVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEML 165
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 92.7 bits (220), Expect = 1e-17
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + E+ + I + GF + +Q + +P A+ G D+ QA++G GKTA F+++ +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 449 L-----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L E H L++ TREL QI K+ + KY +G + +GG+ K + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKY-TGFNIQAIYGGVDYMKQRDAL 121
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
K A IV+GTPGR++ ++DE D+M + + D++ I R P
Sbjct: 122 K-AGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFD-MGFIADLRFILRRLP 177
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 92.7 bits (220), Expect = 1e-17
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D + + A G+ P+++Q E IP A+ G DI+ A++G GKT F L L
Sbjct: 15 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 74
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + ++ LV+ TRELAFQIS+++E + GV+ +V GG+ L P
Sbjct: 75 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 132
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXR 778
HI++ TPGR++ + ++DE D++L ++D +V +I +
Sbjct: 133 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILK 182
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 92.7 bits (220), Expect = 1e-17
Identities = 59/173 (34%), Positives = 89/173 (51%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ ++ ILR+I D FE P+E+Q IP + G DI+ A +G GKT F +Q+
Sbjct: 4 FKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+E + LV+ TRELA Q+ + FS++ +RV+ +GG+ I L+ A
Sbjct: 64 IEKGNG-IRALVLTPTRELAEQVQNSLKEFSRHKQ-LRVAPIYGGVAINPQIRQLERA-- 119
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VV TPGR+L +LDE D+ML+ + DV+EI P
Sbjct: 120 DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLD-MGFIDDVEEIIDECP 171
>UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1;
Caldivirga maquilingensis IC-167|Rep: DEAD/DEAH box
helicase-like - Caldivirga maquilingensis IC-167
Length = 359
Score = 92.7 bits (220), Expect = 1e-17
Identities = 57/164 (34%), Positives = 89/164 (54%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 460
LLK E+ RAI + GF P+EVQ IP+ + G ++ QA++G GKTA ++L T+ ++
Sbjct: 5 LLKEELRRAISEYGFNEPTEVQRSVIPKILDGFNVAMQARTGSGKTAAYLLPTMSMMKGD 64
Query: 461 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
LV+ TRELA QI ++ F+KY + +V +GG+ + L+ A ++V
Sbjct: 65 LGE--ALVISPTRELALQIMNQFLIFNKY-TKFNSAVVYGGVGYSGQVKALRDA--SLIV 119
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
TPGR+L I+DE D+ML+ + +DV I
Sbjct: 120 ATPGRLLDLTGKSIVDLSNVKYLIIDEVDRMLD-MGFIKDVYTI 162
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 92.7 bits (220), Expect = 1e-17
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+GF + L ++ G + P+ VQ CIP + G D L AK+G GKTA FVL L
Sbjct: 2 AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
Q+L ++ LV+ TRELA+QI++++ K + G++ + GGM + L
Sbjct: 62 QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIIVGGMDMVAQALELSRK 120
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLES--LDMRRDVQEIXRNTP 787
PH+V+ TPGR+ F ++DE D++LE D D++ I P
Sbjct: 121 -PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 92.3 bits (219), Expect = 2e-17
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+GF L P ++ G P+ VQ C+P + G D + AK+G GKTA FVL L
Sbjct: 2 AGFGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPIL 61
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
Q+L ++ LV+ TRELA+QI++++ K + G++ + GGM + L
Sbjct: 62 QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIVVGGMDMVTQALDLSRK 120
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLE 739
PH+V+ TPGR+ F ++DE D++LE
Sbjct: 121 -PHVVIATPGRLADHLRSSSTFSIKKIRFLVMDEADRLLE 159
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 92.3 bits (219), Expect = 2e-17
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L P IL++++ G+E+ + VQ + IP A+ G D+L + +G GKTA F+L ++Q+
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQR 62
Query: 449 L--EPSESHV--YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L EP+ + VLV+ TRELA Q+ K + K M R + GG P + L
Sbjct: 63 LLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLS 122
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VV TPGR++ +LDE D+ML+ + D++ I P
Sbjct: 123 QPV-DVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLD-MGFVDDIKAIAARCP 177
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 92.3 bits (219), Expect = 2e-17
Identities = 46/169 (27%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L E+L+++V G E P+++Q + IP+ + G +++ +A++G GKT ++L +++++ S+
Sbjct: 9 LSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEKIDDSK 68
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
+ + +++ T EL QI+ + + + + G I++ E LK PHI+V
Sbjct: 69 NEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNK-PHILV 127
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
GT GRIL ++DE DK+L+ +++ +DV+ + ++ P
Sbjct: 128 GTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINI-KDVKSVVKSCP 175
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 92.3 bits (219), Expect = 2e-17
Identities = 58/173 (33%), Positives = 84/173 (48%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L EIL A+ D GF P+ +Q IP + D++ A++G GKTA F L L
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLAI 106
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ E +V LV+ TRELA Q ++ E F+ + + V +GG P LK
Sbjct: 107 VDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGA- 165
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+VVGTPGR++ +LDE D+ML + DV+ I + P
Sbjct: 166 QVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLR-MGFAEDVETIASSAP 217
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 92.3 bits (219), Expect = 2e-17
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S F L IL+AI D G+ PS +Q + IP + G D++ A++G GKTA F L
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 440 LQQLEPSE----SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L+ L E + V LV+ TRELA Q+++ + + +++S ++ +V FGG+ I
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLS-LKSTVVFGGVKINPQMM 122
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ I++ TPGR++ +LDE D+ML+ + D+++I P
Sbjct: 123 ALRRGA-DILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLD-MGFIHDIKKILAILP 180
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 92.3 bits (219), Expect = 2e-17
Identities = 59/177 (33%), Positives = 91/177 (51%)
Frame = +2
Query: 257 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 436
+S G DFL E L+++ G+E + +Q IP + G D++ A++G GKTA F L
Sbjct: 12 NSLGLPDFL--QENLQSL---GYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALP 66
Query: 437 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L ++ LV+C TRELA Q+++ + + + M G+R+ FGG +++ + L+
Sbjct: 67 ILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLR 126
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
HIVV TPGR+L +LDE D+ML + DV I TP
Sbjct: 127 EG-THIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLR-MGFIDDVDTILAKTP 181
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 92.3 bits (219), Expect = 2e-17
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L P I++ I + PS +Q + +P A+ G D+L A++G GKTA F + LQ
Sbjct: 120 FNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQH 179
Query: 449 --LEP---SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
++P LV+ TRELA QI KE + FS+ + ++ + GG I+K L
Sbjct: 180 CLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSEL 239
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ A I V TPGR + +LDE D+ML+ + ++EI R+ P
Sbjct: 240 R-AGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD-MGFEPQIREIMRSLP 295
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 92.3 bits (219), Expect = 2e-17
Identities = 56/173 (32%), Positives = 90/173 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + +K +L A+ D GFE +Q IP + G D++ QA +G GKT + ++ LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
++ + L++ TRELA QI++E ++F+KY + VR +GG + + LK
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKY-TKVRPVAIYGGQSMGVQLDALKRGA- 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR++ +LDE D ML+ + D+Q I TP
Sbjct: 121 EILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLD-MGFIDDIQFILDLTP 172
>UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;
n=6; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 48 - Oryza sativa subsp. japonica (Rice)
Length = 811
Score = 92.3 bits (219), Expect = 2e-17
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + P ++A+ D G+ + VQ +P + G D+L +AK+G GK+A F+L ++
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403
Query: 449 -LEPSESH-------VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
L +SH ++ L++C TRELA Q++ E KY G+ V GG + D+
Sbjct: 404 VLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQ 463
Query: 605 EVLKTACPHIVVGTPGRIL---AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIX 775
L++ I+V TPGR+L +LDE D +L+ L R D+++I
Sbjct: 464 RRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLD-LGFRTDIEKIV 522
Query: 776 RNTP 787
+ P
Sbjct: 523 DSLP 526
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 91.9 bits (218), Expect = 2e-17
Identities = 48/157 (30%), Positives = 82/157 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ + + L A+ + G P+E+Q + IP+A+ G +++ +++G GKT ++L L +
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
E L++ T+ELA QI + ++ + S + V GG I++ E LK P
Sbjct: 64 TEELPEQTQALILAPTQELAMQIVEVAKQLTATTS-ITVLPLIGGANIKRQVEKLKKKKP 122
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
H+ VGTPGRIL ++DE D+M+E
Sbjct: 123 HVAVGTPGRILELMEMKKLKVPHVKMIVVDEADRMME 159
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + KP ++ A+ + F P+ +Q + P G+ ++ Q+++G GKT ++L TL +
Sbjct: 6 FTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTLNR 65
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG---VRVSVFFGGMPIQKDEEVLKT 619
+ P V +++ TRELA QI +E + +K+ + + GG Q+ E LK
Sbjct: 66 INPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIEKLKK 125
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PHIVVGTPGRI I+DE D ML+ + DV +I P
Sbjct: 126 Q-PHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLD-MGFIHDVDKIAARMP 179
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--- 451
++KP +L AI D G+E P+ +Q IP + D+ A++G GKTA F L LQ+L
Sbjct: 8 VIKP-LLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQRLRKT 66
Query: 452 -EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ + + LV+ TREL+ QI ++ + ++K M G+ ++V GG ++ +++LK
Sbjct: 67 SDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNM-GINIAVLVGGKDLESQQKILKEGV- 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
IV+ TPGR+L F+LDE D+ML+ + ++++ I
Sbjct: 125 DIVIATPGRVL-EHVDKGLSLSHVEIFVLDEADRMLD-MGFMKEIRRI 170
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 91.9 bits (218), Expect = 2e-17
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Frame = +2
Query: 257 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 436
H F + L ++L AI + G+ P+E+Q + IPQ + G DI+ A++G GKTA + L
Sbjct: 3 HPLNFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALP 62
Query: 437 TLQQLEPSESH-VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L +++ ++ H ++ TREL QI ++ +KY + +R+ +GG+ + +E L
Sbjct: 63 ILMKIKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKY-TDLRIVALYGGIGPKLQKEHL 121
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+ I+V TPGR L +LDE DKM++
Sbjct: 122 QKGV-DIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMD 162
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 91.9 bits (218), Expect = 2e-17
Identities = 53/173 (30%), Positives = 87/173 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D LK IL AI G++ P+ +Q++ + + G D L +AK+G GKTA F + LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L H VL++ REL QIS+E+ + K + RV+ GG + ++ L A
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGA-- 124
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
++ TPGR++ ++DE D++ + + R V I ++ P
Sbjct: 125 QVISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFD-MGFREAVTSILKDLP 176
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 91.9 bits (218), Expect = 2e-17
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L PEILRA+ D G P+ +Q + IP + G D+L A++G GKT F+L L ++
Sbjct: 8 LSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHKIAEGR 67
Query: 464 SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
H LV+ TRELA QI + + ++KY+ + GG+ + E LK I
Sbjct: 68 RHGIRNRALVLSPTRELATQIHQAAKDYAKYLH-TNAVLLVGGVDFIRQERNLKRNW-DI 125
Query: 635 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHG 793
VV TPGR+L I+DE D+ML+ + D+ I R P G
Sbjct: 126 VVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLD-MGFLPDINTIVRQLPKG 177
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
+S F F L +L+A+ + F P+ VQ IP A+ G D+ A++G GKTA FVL
Sbjct: 181 TSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPL 240
Query: 440 LQQ---LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
L + L+ + + L++ TRELA Q K+ + FS++ + ++ + GG ++ +
Sbjct: 241 LNRLVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQF-TYIKAGLVTGGEDFKEQAAM 299
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
L+ P +++GTPGR+L ILDE D+ML+ + D++ + + +
Sbjct: 300 LRKV-PDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLD-MGFAEDMERLCKECEN 357
Query: 791 GE 796
E
Sbjct: 358 RE 359
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 91.9 bits (218), Expect = 2e-17
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Frame = +2
Query: 254 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 433
I F D+ ++ +I+ ++ D G HP +Q +P A+ G DI+ QAK+G GKT F +
Sbjct: 34 IEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGI 93
Query: 434 ATLQQL----EPSESHVYV------LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 583
LQ++ +P + V LV+ TRELA Q++K+ E ++ R++ +GG
Sbjct: 94 PALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENAAR-KRNARIATIYGG 152
Query: 584 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 763
+ + L+ IVVGTPGR++ ILDE D+ML+ L DV
Sbjct: 153 RAYEPQVDSLQKGV-EIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLD-LGFLPDV 210
Query: 764 QEIXRNTP 787
+ + TP
Sbjct: 211 ETLIAGTP 218
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 91.9 bits (218), Expect = 2e-17
Identities = 54/168 (32%), Positives = 88/168 (52%)
Frame = +2
Query: 233 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 412
+K + + F+D LK ++L + D G+EHPS +Q + IP A+ DIL ++K+G G
Sbjct: 5 IKNNLYENENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTG 64
Query: 413 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 592
KT F++ LQ + + +++ TRELA QIS + SKYM + + V G+
Sbjct: 65 KTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQV--TGVDS 122
Query: 593 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
+ D+ + +I++GTPG+I +LDE DK+L
Sbjct: 123 KIDKNNIDF---NILLGTPGKIY-DCLCKNEVNKTCKTLVLDEADKLL 166
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 91.5 bits (217), Expect = 3e-17
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
+ F D L P +LRA+ + G+ P+ +Q + IP + G D+L A++G GKTA F L
Sbjct: 6 AQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPL 65
Query: 440 LQQLEPS-----ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
L +L + ++ VLV+ TREL QI+ +E FS++ VRV+ FGG+
Sbjct: 66 LHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQP-VRVTTIFGGVSQVHQV 124
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
+ L+ I+V PGR+L +LDE D+ML+ + + ++ I
Sbjct: 125 KALEEGV-DIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLD-MGFAKPIERIVATL 182
Query: 785 P 787
P
Sbjct: 183 P 183
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 91.5 bits (217), Expect = 3e-17
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ F L IL+ I GF ++VQ + IP+A+ D++ A++G GKTA FV+ LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 449 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + S L++ TRELA Q+ K+ + +K+ +G++ + GG K + L
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKF-TGIQSGMITGGQEF-KFQAALFR 119
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
P I++ TPGR++ FILDE D+ML+ + DV I
Sbjct: 120 KNPEIIIATPGRLIDHLKQKKDLMEDVEYFILDEADRMLD-MGFEEDVLTI 169
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 91.5 bits (217), Expect = 3e-17
Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L ILR I D F + + +Q +P + G+D +A++G GKTAVF++ L Q
Sbjct: 118 FHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLTQ 177
Query: 449 L--EPS-----ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
P+ + LV+ TRELA QI KE S++ V++ FGGM +K +
Sbjct: 178 FLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAI-FGGMDYEKQKR 236
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L IVV TPGR+L ++DE D+ML+ + DVQ I TP
Sbjct: 237 RLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLD-MGFIPDVQRIIHYTP 295
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 91.5 bits (217), Expect = 3e-17
Identities = 52/158 (32%), Positives = 86/158 (54%)
Frame = +2
Query: 266 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 445
G+ L P +L+ I D G++ PS VQ IP + G ++L ++K+G GKTA +++ L
Sbjct: 109 GWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLN 168
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
+ SE + +++ RELA QIS+ +R S+ +GV + GG +Q D+ + +
Sbjct: 169 MINSSELSIQGIILVPIRELALQISRNVKRMSE-GTGVISAPVVGGTSMQ-DDIIRVSNG 226
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
H++VGTPGRI+ + DE DK+L+
Sbjct: 227 VHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLD 264
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 91.1 bits (216), Expect = 3e-17
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D L PE+L+ + G++ P+ +Q IP A+ DI+ A++G GKTA F+L +Q
Sbjct: 11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQH 70
Query: 449 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + Y +++ TRELA Q+ + + K + G+ + GGM + K + V
Sbjct: 71 LLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMK-QSVQLA 129
Query: 620 ACPHIVVGTPGRI---LAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
P ++VGTPGRI + ++DE DK+LE +D ++ + P
Sbjct: 130 KRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLE-MDFANEIDYLIEKLPK 188
Query: 791 GET 799
T
Sbjct: 189 QRT 191
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 91.1 bits (216), Expect = 3e-17
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Frame = +2
Query: 323 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE-SHVYVLVMCHTR 499
F P+E+Q + IP + G D++ ++K+G GKTA ++L L +E + V +++ TR
Sbjct: 16 FTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTR 75
Query: 500 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 679
ELA Q + R K +SG++ ++ +GG I + E L + IV+GTPGRIL
Sbjct: 76 ELALQTHRVASRLGK-ISGIKSTIVYGGASIIRQVEELPGS--DIVIGTPGRILDLYNQK 132
Query: 680 XXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFM 859
+LDE D ML+ + D+++I TP G + + + +T FM
Sbjct: 133 YLKLDHVKYLVLDEADLMLD-MGFIDDIKKIISFTPEGRQTILLSATLPAEVKTIANHFM 191
Query: 860 QDP 868
+P
Sbjct: 192 NNP 194
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/173 (26%), Positives = 88/173 (50%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + + +A+ + F + +Q IP+ + G D++ QA++G GKT F + +++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+EP L++C TREL Q+ +E ++ ++ +R++V +GG K L+ A P
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALE-AKP 123
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H+++ TPGR + LDE D+ML+ + + ++ I + P
Sbjct: 124 HLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLK-MGFQEALETILKKIP 175
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 91.1 bits (216), Expect = 3e-17
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Frame = +2
Query: 242 SYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 421
+++S+H S F L P IL+A+ + P +Q + IP + G DIL A++G GKTA
Sbjct: 3 THLSLHMS-FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTA 61
Query: 422 VFVLATLQQLEP----SESHVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGM 586
FVL LQ L+ H+ LV+ TRELA Q+ + ++ FS + + ++ +GG+
Sbjct: 62 SFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGV 121
Query: 587 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 766
I + ++++ I++ TPGR+L +LDE DKML +L + ++
Sbjct: 122 SI--NPQMIQLQGVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKML-NLGFKEEMA 178
Query: 767 EIXRNTP 787
I + P
Sbjct: 179 NIFKLLP 185
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 91.1 bits (216), Expect = 3e-17
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EP 457
L IL AI +CG+ ++VQ + IP A+ G DI+ A++G GKTA F L L+QL +P
Sbjct: 29 LSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQLSKQP 88
Query: 458 SESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
++ + LVM TRELA Q+ +++S+++ ++ +GG + + ++ I
Sbjct: 89 NDKPLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQGV-DI 146
Query: 635 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
+V TPGR+ ++DE D+ML+ L RD++++ R
Sbjct: 147 LVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLD-LGFVRDIEKVKR 193
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 91.1 bits (216), Expect = 3e-17
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S + F L PE+L ++ GF P +Q IP+A +G DI+ +A +G GKT F + L
Sbjct: 122 SAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPIL 181
Query: 443 QQL--EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
+ +V LV+ TRELA QI + +E K +RV GG+ +QK + +L
Sbjct: 182 EHCLRNVDAKYVQALVVAPTRELAHQICQHFE-LIKPSPNIRVMSITGGLAVQKQQRLLN 240
Query: 617 TACPHIVVGTPGRI--LAXXXXXXXXXXXXXXFILDECDKMLE 739
PH+VV TPGR+ + +LDE D++L+
Sbjct: 241 KH-PHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQ 282
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 91.1 bits (216), Expect = 3e-17
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 1/176 (0%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAV 424
+ + F + L IL AI + GFE P+++Q + IP + +I+ QA++G GKTA
Sbjct: 1 MEVEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTAS 60
Query: 425 FVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
F + ++ + + + +++ TRELA Q++ E E K ++++ +GG I
Sbjct: 61 FAIPLIELVNENNG-IEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAIYPQI 118
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
+ LK A +IVVGTPGRIL FILDE D+ML ++ +DV++I
Sbjct: 119 KALKNA--NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEML-NMGFIKDVEKI 171
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 91.1 bits (216), Expect = 3e-17
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Frame = +2
Query: 236 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 415
K + HSS F+ L IL+ + + GFE P+++Q + IP A+LG DI+ A +G GK
Sbjct: 251 KSMMTTTHSS-FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGK 309
Query: 416 TAVFVLATLQQL--EPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 586
TA F++ L++L P + VL++C TRELA Q + + + + + V + GG+
Sbjct: 310 TAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASF-TDIMVCLCIGGL 368
Query: 587 PIQKDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 763
++ E+ L+ P IV+ TPGR + ++DE D+MLE ++
Sbjct: 369 SLKLQEQELRKR-PDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLED-GFADEL 426
Query: 764 QEIXRNTP 787
EI + P
Sbjct: 427 NEIIQACP 434
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 90.6 bits (215), Expect = 5e-17
Identities = 54/144 (37%), Positives = 76/144 (52%)
Frame = +2
Query: 356 IPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYER 535
IP A+ G D L QAK+G GKTA F L L L+ E L++ TRELA QI +
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRD 59
Query: 536 FSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFIL 715
F++Y++ VR F+GG + D +VL+ +V+GTPGRI F+L
Sbjct: 60 FARYLN-VRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVL 118
Query: 716 DECDKMLESLDMRRDVQEIXRNTP 787
DE D ML+ ++ + D+ I P
Sbjct: 119 DEVDVMLD-MNFKEDIDFIYSQLP 141
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 90.6 bits (215), Expect = 5e-17
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L P+I +AI G+ P+ +Q + IP + G+D++ A++G GKTA F L L +
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 449 L--------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
L P+ V L++ TRELA Q++ ++K+ + +R +V +GG+ I
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKF-TPLRSTVVYGGVDINPQI 140
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
+ L+ +V+ TPGR+L +LDE D+ML+ + D+Q I
Sbjct: 141 QTLRRGV-ELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLD-MGFLPDLQRIINLL 198
Query: 785 P 787
P
Sbjct: 199 P 199
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 90.6 bits (215), Expect = 5e-17
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--- 451
+L P I A+ + G+ P+ VQ + G D++ A++G GKT F +A Q +
Sbjct: 5 ILPPAIGEALAERGYSEPTPVQAAAMAPDSAGRDLIVSAQTGSGKTVAFGIALAQDILDQ 64
Query: 452 ---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
P + VL + TRELA Q+S+E + +G+R++ GGM K+ L++
Sbjct: 65 ISGTPLQERPLVLAIAPTRELALQVSREL-GWLYAKAGLRIATCVGGMDASKERRALRSG 123
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
P IVVGTPGR+ +LDE D+ML+ + R D++EI TP
Sbjct: 124 -PAIVVGTPGRLRDHLERGALDLSGLIGVVLDEADEMLD-MGFREDLEEILDATP 176
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 90.6 bits (215), Expect = 5e-17
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L PE+++A + + P+ +Q + IP A+ G DI+ A++G GKTA F + L +
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNR 142
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L + Y ++ TRELA QI + ++ M GVR + GGM + L P
Sbjct: 143 LWHDQEPYYACILAPTRELAQQIKETFDSLGSLM-GVRSTCIVGGMNMMDQARDLMRK-P 200
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLE 739
HI++ TPGR++ F ++DE D++L+
Sbjct: 201 HIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLD 238
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 90.6 bits (215), Expect = 5e-17
Identities = 52/179 (29%), Positives = 91/179 (50%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F+++ + +ILRA+ G+ P++VQ IP A+ D++ ++++G GKTA F +
Sbjct: 2 SHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLC 61
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
+ E+ L++ TRELA Q+ ++ ++ ++ + FG K + LK
Sbjct: 62 ELANWDENKPQALILTPTRELAVQVKEDITNIGRF-KRIKATAVFGKSSFDKQKAELKQK 120
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGET 799
HIVVGTPGR+L ++DE D+ML ++ V+ I ++ P T
Sbjct: 121 -SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEML-NMGFIEQVEAIIKHLPTERT 177
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 90.2 bits (214), Expect = 6e-17
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L P + I F++P+E+Q + IP + G ++ Q+++G GKT F+L
Sbjct: 3 FEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHG 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVR---VSVFFGGMPIQKDEEVLKT 619
LE + V ++ TRELA Q+ E + + GG QK E LKT
Sbjct: 63 LESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKLKT 122
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
PHI+VGTPGRIL F++DE D ML+
Sbjct: 123 P-PHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLD 161
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 90.2 bits (214), Expect = 6e-17
Identities = 51/157 (32%), Positives = 82/157 (52%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F++ L ++L A+ F +E+Q IP + G +I ++ +G GKTA FVL L++
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+EP++ V ++M TRELA QI + F + + ++ GG ++ + LK +
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS-- 120
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
IVVGTPGR+ ILDE D+ML+
Sbjct: 121 QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLK 157
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 90.2 bits (214), Expect = 6e-17
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Frame = +2
Query: 320 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSESHVYVLVM 487
G++ P+ +Q + IP + G D++ A++G GKTA FVL L++L P + + LV+
Sbjct: 20 GYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALVL 79
Query: 488 CHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 664
TRELA Q+S+ +R+S+ +R +GG I + L C IVV TPGR+L
Sbjct: 80 VPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGC-DIVVATPGRLLD 138
Query: 665 XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+LDE D+ML+ L ++ +I TP
Sbjct: 139 LMRKNALDLRGLKALVLDEADRMLD-LGFADELDDILDQTP 178
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 90.2 bits (214), Expect = 6e-17
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F P+I I D G+ P+ +Q + IP A+ G D++ A++G GKTA FVL LQ+
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 449 L-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
L V +++ TRELA QI E KY +G+R +GG+ Q + L+
Sbjct: 63 LMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKY-TGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I V PGR+L ILDE D+M + + DV+ I R P
Sbjct: 122 -EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFD-MGFLPDVRRILRLAP 173
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 90.2 bits (214), Expect = 6e-17
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Frame = +2
Query: 257 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 436
+++ F DF + +L A+ D F + +Q + +P + G D++ A++G GKTA F+L+
Sbjct: 7 NTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTAAFLLS 66
Query: 437 TLQQL-----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 601
+ L P + +V+ TRELA QI KE + Y V ++++ GG I+
Sbjct: 67 LMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIY-GGTSIEHQ 125
Query: 602 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN 781
+++ + +++GTPGRI+ +LDE D+M + L DV+ + R
Sbjct: 126 KKLFQACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFD-LGFIDDVRYLLRQ 184
Query: 782 TP 787
P
Sbjct: 185 MP 186
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 90.2 bits (214), Expect = 6e-17
Identities = 50/154 (32%), Positives = 82/154 (53%)
Frame = +2
Query: 326 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTREL 505
E VQ + IP +LG D+L QAKSG GKT VF + ++ L+ ++ +++ TRE+
Sbjct: 35 EKLKSVQAKAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPTREI 94
Query: 506 AFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXX 685
+ QI + + + +G R SV+ GG+ + + LK P IV+GTPGR+
Sbjct: 95 STQIKETVRKLTP--AGARTSVYTGGIGHKLNVIDLKKTRPQIVIGTPGRVAQLIRMGAM 152
Query: 686 XXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
F+LDE DK+++ + + D+ I + P
Sbjct: 153 DISHVDFFVLDEADKLMDEV-FKPDINTIINSLP 185
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 90.2 bits (214), Expect = 6e-17
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Frame = +2
Query: 320 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 499
GF+ PS +Q IP+ + G DI+ AK+G GKTA F + L QL V+ +++ TR
Sbjct: 23 GFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTR 82
Query: 500 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 679
ELA QI +++ M+ V SV GG+ + ++ PHI+V TPGR+ +
Sbjct: 83 ELAVQIGEQFNAIGAPMN-VNCSVVIGGID-NVTQALILDKRPHIIVATPGRLASHLNNG 140
Query: 680 XXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVL 814
F +LDE D++L D ++ I + P E +L
Sbjct: 141 LKIALKFCKFLVLDEADRLLGE-DFELEIASILEHLPPPEKRQTLL 185
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 90.2 bits (214), Expect = 6e-17
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S GF L PE+ RAI GF P+ +Q + IPQ + G DI+ +K+G GKTA F++
Sbjct: 9 SGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPL 68
Query: 440 LQQLEPSESHVYV--LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
+ +L+ + V + L++ TRELA QI+ + K+ S ++ S+ GG + E L
Sbjct: 69 INKLQNHSTVVGIRGLILLPTRELALQIASVLKALLKF-SDIQYSIMVGGHGFEGQFESL 127
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ P I++ TPGR+L I DE D + E + + +++I + P
Sbjct: 128 -ASNPDILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFLFE-MGLADQLKQILSHLP 183
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 90.2 bits (214), Expect = 6e-17
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
S F F L +LRA+ F P+ +Q IP A+ G DI+ A +G GKTA F++ T+
Sbjct: 333 SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTI 392
Query: 443 QQL-------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 601
++L P E+ VL++ TRELA Q + +K+ + +R + GG+ ++
Sbjct: 393 ERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKF-TDIRFCLCVGGLSVKSQ 451
Query: 602 EEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXR 778
E LK P +V+ TPGR++ ++DE D+MLE ++ EI +
Sbjct: 452 EAELKLR-PEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLED-GFADELNEIVK 509
Query: 779 NTPHG 793
+ P G
Sbjct: 510 SCPKG 514
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 89.8 bits (213), Expect = 8e-17
Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L P++L AI + + P+ +Q E IP+ +L D+L A +G GKTA FVL LQ
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 449 L--EPSESH-VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +P S VL++ TRELAFQI K ++ + +V GG K E+L++
Sbjct: 63 LLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP-FESNVVTGGFASDKQLEILQS 121
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
I+V TPGR+L I+DE D+ML+
Sbjct: 122 KI-DILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLD 160
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 89.8 bits (213), Expect = 8e-17
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF +L ++ GF P+ +Q E IP + D++ A++G GKTA ++L L +
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILHK 62
Query: 449 -LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE-VLKTA 622
+E + + LV+ TRELA QI ++ E FS +++ ++V+ GG D++ T
Sbjct: 63 IIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALTD 122
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+IV+ TPGR+LA +LDE D+ML+
Sbjct: 123 GANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLD 161
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 89.8 bits (213), Expect = 8e-17
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +L+A+ D G+ P+ +Q + IP + G D+L A++G GKTA F L L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 449 L----EPSESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L +P+ + LV+ TRELA QI++ + + K+M G+ V+ FGG+ + L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHM-GLTVATIFGGVKYGPQMKAL 185
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
A +VV TPGR++ F+LDE D+ML+
Sbjct: 186 -AAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLD 226
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 89.8 bits (213), Expect = 8e-17
Identities = 55/178 (30%), Positives = 88/178 (49%)
Frame = +2
Query: 254 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 433
+ + F + L + RAI + G+E P+ VQ G D++ ++K+G GKTA F +
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 434 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L+++ LVMC TRELA Q+++E+ +K+ + V +GG + + + L
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRD-LSVVAVYGGASMGEQLQKL 135
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ A I+VGTPGRI LDE D+ML ++ +V I N P
Sbjct: 136 E-AGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEML-NMGFFEEVTRILDNLP 191
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 89.8 bits (213), Expect = 8e-17
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L IL A+ + ++ P+++Q IP + G DIL A++G GKTA F L L++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 449 LEPSESH-----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L E + VLV+ TRELA Q+++ + ++K + + V FGG+ + L
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPV-FGGVSSYPQIQAL 121
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
K+ IVV TPGR+L + DE D+M + + D+++I + P
Sbjct: 122 KSGI-DIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFD-MGFIHDIKQIVKMLP 177
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 89.8 bits (213), Expect = 8e-17
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + E+ RA + G++ P+++Q E IP A+ G DI+ A++G GKTA F + LQ+
Sbjct: 43 FEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQK 102
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L ++ L++ TREL+ QI ++ + G+ V + GG+ + L P
Sbjct: 103 LLEKPQRLFSLILAPTRELSLQIKEQLISLGSEI-GLDVCLILGGLDMVSQALQLSKK-P 160
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIXRNTP 787
HI+VG+PGRI + +LDE DK+L S D + +I + P
Sbjct: 161 HIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLL-STDFDDSLNKIITSLP 213
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 89.8 bits (213), Expect = 8e-17
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Frame = +2
Query: 236 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 415
KGS + + + L E+L+A+ G++ PS +Q IP + D++ A++G GK
Sbjct: 304 KGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGK 363
Query: 416 TAVFV---LATLQQLEP-SESH----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 571
TA FV LA + +L P SE + Y +VM TRELA QI +E +F+ Y+ G RV+
Sbjct: 364 TAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL-GFRVTS 422
Query: 572 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
GG I++ + C IV+ TPGR++ +LDE D+M++
Sbjct: 423 IVGGQSIEEQGLKITQGC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMID 477
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 89.4 bits (212), Expect = 1e-16
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Frame = +2
Query: 230 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 409
E + S S S GF+ L + L ++ G+ P+ +Q + IP + G DI+ A++G
Sbjct: 2 EEQQSKKSKSSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGS 61
Query: 410 GKTAVFVLATLQQLEP-SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 586
GKTA +++ + +LE S V L++C TRELA Q K + K ++ ++ S+ GG
Sbjct: 62 GKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGS 120
Query: 587 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 766
+ + L + P I+V TPGR+ DE D M ES V
Sbjct: 121 KLSDQFDNLSSG-PDIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFES-GFSEQVS 178
Query: 767 EIXRNTP 787
+I R P
Sbjct: 179 DIMRMLP 185
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 89.4 bits (212), Expect = 1e-16
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+D L +L+AI F P+ +Q CIP +LG DI A +G GKTA F+L L++
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 449 L--EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +P E+ V VLV+ TREL Q+ + +++ + V + GG+ ++ E L++
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQF-TEVTTCLAVGGLDVKTQEAALRS 301
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
P +++ TPGR++ ILDE D+ML+ ++EI R H
Sbjct: 302 G-PDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEY-FEEQMKEIIRLCSH 357
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 89.4 bits (212), Expect = 1e-16
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = +2
Query: 290 PEILRA-IVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSES 466
P+ LR + G+E ++VQ + +P A G D++ QA++G GKTA F L L++ +PS
Sbjct: 13 PDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILERCQPS-G 71
Query: 467 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 646
+ LV+ TRELA Q+++E+E + +G+ + +GG ++K + L I+VGT
Sbjct: 72 KLQALVLAPTRELANQVAQEFE-LLQGNAGLSIVTVYGGTDLEKQAKTLAKGV-DIIVGT 129
Query: 647 PGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
PGR++ LDE D+ML+
Sbjct: 130 PGRVMDMNERGHIDLNSPKMLCLDEADRMLD 160
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 89.0 bits (211), Expect = 1e-16
Identities = 59/164 (35%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVFVLAT 439
S + +F L P I+RAI DCGF P+ +Q EC+ A G DI+ A++G GKT F L
Sbjct: 17 SAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSGKTLAFALPI 76
Query: 440 LQQLEPSESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
LQ+L V L++ TRELA Q+ + Y + + V GGM +K E +L
Sbjct: 77 LQRLLSQGIDVLRALIVAPTRELALQVCAMMRAVAVY-TKIDVCPVVGGMSKEKQERLLN 135
Query: 617 TACPHIVVGTPGRI---LAXXXXXXXXXXXXXXFILDECDKMLE 739
P ++V TPGR+ + F+LDE D+M+E
Sbjct: 136 RK-PAVIVATPGRMWDTMQSGHEHLTELSALSFFVLDEADRMVE 178
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 89.0 bits (211), Expect = 1e-16
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Frame = +2
Query: 266 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 445
GF+ F L+ +L AI+ GF P+ +Q + IP + G D++ A++G GKTA F++ L
Sbjct: 23 GFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLN 82
Query: 446 QLEPSESHVYV--LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L+ V + LV+ TREL+ QI + +K++ +R + GG + + E+L
Sbjct: 83 TLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLD-LRFAALVGGDSMDQQFELL-A 140
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ P +VV TPGR+L +LDE D++ E L ++ + I + P
Sbjct: 141 SNPDVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFE-LGLQPQIGAIMQKLP 195
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 88.6 bits (210), Expect = 2e-16
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F+ F L IL+AI + G++ P+ +Q + IP+ +L +L A++G GKTA FVL L +
Sbjct: 3 FQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILDK 62
Query: 449 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + S VL++ TRELA QI+ +++S+Y+ + GG+ +
Sbjct: 63 LTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLR-INSITITGGISYGLQNRMFSK 121
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
I+V TPGR+L ILDE D+ML+ + D+++I T
Sbjct: 122 PI-DILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLD-MGFVPDIRKIYNAT 174
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 88.6 bits (210), Expect = 2e-16
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Frame = +2
Query: 290 PEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL-----E 454
PE+++A+ +CG+E + +Q + IP A G DI A++G GKTA F L +QQL
Sbjct: 10 PEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQQLLESGKS 69
Query: 455 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
S L+ TRELA QI+ + ++KY + + V+ FGG + E +L+ I
Sbjct: 70 ASRKTARALIFAPTRELAEQIADNIKAYTKY-TNLSVAAIFGGRKMSSQERMLENGV-DI 127
Query: 635 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+V TPGR+ + DE D++L+
Sbjct: 128 LVATPGRLEEHIESGNVSVANIEFLVFDEADRILD 162
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 88.6 bits (210), Expect = 2e-16
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Frame = +2
Query: 227 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 406
K + + VS+ +S F D ++ +I +A+ G P +Q IP AV G D++ QA++G
Sbjct: 42 KTLTETTVSVPTS-FADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTG 100
Query: 407 MGKTAVFVLATLQQLE----------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSG 556
GKT F + L ++ ++ LVMC TRELA Q+SK+ + + G
Sbjct: 101 TGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAAS-VRG 159
Query: 557 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
RV +GG+ + + LK A +VVGTPGR+L +LDE D+ML
Sbjct: 160 ARVLTVYGGVGYESQIDALK-AGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEML 218
Query: 737 ESLDMRRDVQEIXRNTP 787
+ L DV+ + TP
Sbjct: 219 D-LGFLPDVENLIGRTP 234
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 88.6 bits (210), Expect = 2e-16
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF---VLAT 439
F + L P I +++ + GF P+++Q + IP + G D+L A++G GKTA F VL T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 440 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L ++ SE + + LVM TRELA QIS+ +++ Y + +R GG+ Q+ +
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAY-TRLRTVCITGGVE-QEAQIAAA 120
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
I+V TPGR+ +LDE D ML+ L +D+Q++ + P
Sbjct: 121 DYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLD-LGFIKDIQDVKKFLP 176
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 88.6 bits (210), Expect = 2e-16
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = +2
Query: 290 PEILRAIVDC-GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSES 466
PE L ++ GF +E+Q + I + G DIL Q+K+G GKT F + + + +
Sbjct: 11 PEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSN 70
Query: 467 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 646
+V+ TRELA Q++ E + + Y + +++ +GG+P++ + L HI++GT
Sbjct: 71 KPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGA-HILIGT 129
Query: 647 PGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PGRI +LDE D+ML+ + ++ +I N P
Sbjct: 130 PGRIQDHLAKGTLTLESIKTLVLDEADRMLD-MGFYEEIIKIGSNMP 175
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 88.6 bits (210), Expect = 2e-16
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAV 424
+SIH F D + + + + D P+E+Q + IP + DI+ AK+G GKTA
Sbjct: 1 MSIH---FSDLGINLALQQRLNDLKIITPTEIQEKVIPIVLNDKEDIVALAKTGTGKTAA 57
Query: 425 FVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
F L LQ ++ + + +++ TREL QI+ F+++ S V ++ GG+PI+
Sbjct: 58 FGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPIKPQI 117
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 745
E LK A HI+V TPGR+ FILDE D+M+ +L
Sbjct: 118 ERLKEA-THIIVATPGRLADLVKREAIDIKSISYFILDEADEMVTAL 163
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 88.6 bits (210), Expect = 2e-16
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Frame = +2
Query: 281 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--E 454
L+KP +L+A+ + +E P+ +Q IP A+ G D+L + +G GKTA F++ LQ+
Sbjct: 197 LIKP-LLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRS 255
Query: 455 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 634
P ++ L++ TRELAFQI + + + +KY + +R + G +QK E L+ P +
Sbjct: 256 PFTNYSKALIVTPTRELAFQIYEVFTKLNKY-TKLRACLVIGQSAMQKQEAELR-GNPEV 313
Query: 635 VVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN 781
++ TPGR++ I DE DK+L+ L Q I N
Sbjct: 314 IIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLD-LGFEAAAQNIVEN 362
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 88.6 bits (210), Expect = 2e-16
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Frame = +2
Query: 230 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 409
+V GS V F L+ I+ + G++ P+ +Q IP G D++ A++G
Sbjct: 234 KVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGS 293
Query: 410 GKTAVFVLATLQQL--EPSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 574
GKTA F+L L +L +P E + V+++ TRELA QI E +F+ + S +++ +
Sbjct: 294 GKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA-FESYLKIGIV 352
Query: 575 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE---SL 745
+GG + E + C H+V+ TPGR+L +LDE D+ML+ S
Sbjct: 353 YGGTSFRHQNECITRGC-HVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSE 411
Query: 746 DMRRDVQEIXRNTPH 790
DMRR + + H
Sbjct: 412 DMRRIMTHVTMRPEH 426
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 88.2 bits (209), Expect = 2e-16
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 460
L +L + D GFE+P+E+Q + IP + D + A++G GKTA F L L ++ +
Sbjct: 20 LSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLDLIDVN 79
Query: 461 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 640
V L++ TRELA QI + E+ SK++ + V FGG I ++ I+V
Sbjct: 80 SREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA-QIIV 138
Query: 641 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHG 793
TPGR++ +LDE D+ML ++ + D+ I + G
Sbjct: 139 ATPGRLMDLMKRREVKLDALKYMVLDEADEML-NMGFKEDIDFILSKSDTG 188
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 88.2 bits (209), Expect = 2e-16
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L + RAI + G+ HP+ +Q + IP ++G D+L A++G GKTA F L +
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 449 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L + + L++ TRELA Q+++ + ++ +Y+ + ++ GG + +VL
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLK-LNHALLIGGESMNDQRDVLSK 343
Query: 620 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPH 790
+++ TPGR++ ++DE D+ML+ + DV+ I PH
Sbjct: 344 GV-DVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLD-MGFIPDVERIVSLLPH 398
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 88.2 bits (209), Expect = 2e-16
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F++ L + +A+V+ ++ P+ +Q + IP A+ G D+L A++G GKTA L L Q
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQ 63
Query: 449 LEPSE-----SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L + H LV+ TRELA QI ++ + +++ +R + +GG+ + L
Sbjct: 64 LGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLK-LRSVLIYGGVGQGNQVKAL 122
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
K HI+V TPGR+L F+LDE D+ML+ + D++ I P
Sbjct: 123 KRGA-HILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLD-MGFLPDLKRIITQLP 178
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 88.2 bits (209), Expect = 2e-16
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L + +AI GFE+ + +Q E +P + D++ QA++G GKTA F++ +Q
Sbjct: 44 FSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQT 103
Query: 449 L--EPSE------SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
+ P E S VL + TRELA QI+K+ E+ + +G +V GGM K
Sbjct: 104 MLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAH-TGHKVVTVVGGMHYDKQR 162
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN- 781
+ L+ I+V TPGR++ ILDE D+ML+ + DV+ I R
Sbjct: 163 DQLQNEVVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLD-MGFIPDVKRIIRKC 221
Query: 782 TP 787
TP
Sbjct: 222 TP 223
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 88.2 bits (209), Expect = 2e-16
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F ++ EI RA+ + G P +Q +P A+ G D++ QA++GMGKT F + LQ+
Sbjct: 12 FASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQR 71
Query: 449 L----EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSG----VRVSVFFGGMPIQKD 601
+ E S + L++ TREL Q+ + +KY++ + V +GG P +
Sbjct: 72 VTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEPQ 131
Query: 602 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRN 781
E L+ +VVGTPGR+L +LDE D+ML+ L D++ I R
Sbjct: 132 IESLRKGA-DVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLD-LGFLPDIERILRQ 189
Query: 782 TP 787
TP
Sbjct: 190 TP 191
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 88.2 bits (209), Expect = 2e-16
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L +L+A+ GF P+ +Q + IP A+ G DIL A +G GKTA F+L L++
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 449 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L +S + VL++ TRELA Q E +++ S + + GG+ K +EV
Sbjct: 252 LLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQF-SNITSCLIVGGLS-NKAQEVELR 309
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
P +V+ TPGR++ ILDE D++L+ + + ++ +I + P
Sbjct: 310 KSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLD-MGFKDEINKIVESCP 365
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 88.2 bits (209), Expect = 2e-16
Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Frame = +2
Query: 326 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTREL 505
E P+ +Q +CIP + G ++ A +G GKTA F L LQ L V+ LV+ +REL
Sbjct: 23 ETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPILQTLAADAYGVFALVLTPSREL 82
Query: 506 AFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL----AXXX 673
A+QI ++ F + VR + GG+P + + LK A PHIV TPGR+
Sbjct: 83 AYQIIDQFIAFGAPLR-VRTMLAVGGVPTETQVDALK-ARPHIVAATPGRLRHLLEVFAP 140
Query: 674 XXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+LDE D++ E D+ RDVQ + R P
Sbjct: 141 EVQKAFAHLRYLVLDEADRLTEG-DILRDVQSLLRLLP 177
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 88.2 bits (209), Expect = 2e-16
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA---- 436
F D +I+ AI +E P+ +Q + +P + G D++ AK+G GKTA FVL
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 437 TLQQLEPSESHVYVLVMC-HTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
+ Q E + V+C TRELA QI E ++FSK G+RVS +GGM + + L
Sbjct: 290 IMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSK-AYGLRVSAVYGGMSKHEQFKEL 348
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
K C IVV TPGR++ +LDE D+M +
Sbjct: 349 KAGC-EIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 87.8 bits (208), Expect = 3e-16
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
++P + +A GF+ +E+Q + IP + G D++ ++ +G GKT ++L L ++ P
Sbjct: 5 MQPFLQQAWEKAGFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEV 64
Query: 464 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 637
V+V+ TREL QI +E ++F+ +G +S GG I++ E LK P ++
Sbjct: 65 KQPQVVVLAPTRELVMQIHEEVQKFT---AGTEISGASLIGGADIKRQVEKLKKH-PRVI 120
Query: 638 VGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
VG+PGRIL + DE D++++ M VQ++ ++T
Sbjct: 121 VGSPGRILELIRMKKLKMHEVKTIVFDEFDQIVKQ-KMMGAVQDVIKST 168
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF + ++ I D FE+ + +Q + + + G D++ +A +G GKTAVF++ + +
Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMAR 155
Query: 449 LEPSES------HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 610
L + L++ TREL QI K+ ++ +Y +GV +GG +K E+
Sbjct: 156 LLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRY-TGVNADAVYGGAEYEKQMEL 214
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
LK IVV TPGR++ ++DE D+ML+
Sbjct: 215 LKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLD 257
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 87.8 bits (208), Expect = 3e-16
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
FR + IL+AI + G++ P+ +Q E IP + G D+L A++G GKTA F + LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 449 LEPSESH-----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L +++ + L++ TRELA QI + ++ + ++ +G+ +V FGG+ L
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRH-TGLTSTVIFGGVNQNPQTASL 202
Query: 614 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
+ I++ TPGR+L F+LDE D+ML+ + D+++I P
Sbjct: 203 QKGI-DILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLD-MGFIHDIRKILAELP 258
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 87.8 bits (208), Expect = 3e-16
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L I +AI D GFE P+E+Q + IP A+ G D+L A +G GKT F +Q
Sbjct: 19 FAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQH 78
Query: 449 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
+ E S + VL++ +RELA QI E+ +K+ + ++ + GG P ++ L
Sbjct: 79 ILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKH-TRIQSHLIIGGTPYGMQQQQLS 137
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
C I+V TPGR++ F++DE D+ML+
Sbjct: 138 EPC-DILVATPGRLVELDEKQWLDLTDVSYFVIDEADRMLD 177
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 87.8 bits (208), Expect = 3e-16
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 427
+ +H+ F+D L + A+ D F+ P+ +Q + + G D++ A++G GKT +
Sbjct: 4 IKLHTLSFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAY 63
Query: 428 VLATLQQLEPSES-HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
+L L+ L+ SE + +L+M TREL Q+ +E E+ +KY++ +RV+ +GG+ I
Sbjct: 64 LLPLLRMLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYIN-LRVAGVYGGVNINTQH 122
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
+ L IVV TP R+ F++DE D ML+ L + V I
Sbjct: 123 QDLMQGL-DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLD-LGFKFQVNNIIELL 180
Query: 785 P 787
P
Sbjct: 181 P 181
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 87.8 bits (208), Expect = 3e-16
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS- 460
L +L+A+ D F + +Q E IP A+ G DI+ +A++G GKTA F+L L++L S
Sbjct: 37 LSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALERLLRSP 96
Query: 461 ---ESHVY------------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQ 595
S V VLV+ +RELA Q E +KY + +V GGM IQ
Sbjct: 97 YVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTGGMNIQ 156
Query: 596 KDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
+ E +LK PHIV+ TPGRIL ILDE D++L+ + R++ EI
Sbjct: 157 QQERILKCQ-PHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLD-MGFRQECLEI 214
Query: 773 XR 778
+
Sbjct: 215 LK 216
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 87.0 bits (206), Expect = 6e-16
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F L EIL+AI + G+ P+ +Q + IP + G D++ A++G GKTA F L +Q+
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 449 L--------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 604
L P+ V L++ TRELA Q++ ++K+ + +R +V FGG+ +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKH-TPLRSAVVFGGVDMNPQM 131
Query: 605 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
L+ I++ TPGR+L +LDE D+ML+ + D+Q I
Sbjct: 132 AELRRGV-EILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLD-MGFLPDLQRILNLL 189
Query: 785 P 787
P
Sbjct: 190 P 190
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 87.0 bits (206), Expect = 6e-16
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +L+A+ P+ VQ E +P G D++ +++G GKT F+L + +
Sbjct: 3 FDDMGLAAPLLQALNALNITAPTLVQQEVVPLGKDGGDLMVSSQTGSGKTFGFLLPVMHR 62
Query: 449 LEPSESHVY-------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
+ E LV+C TRELA Q+S++ K+ GVRV+ GGMP K
Sbjct: 63 MMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGKQMA 122
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
L+ A IVVGTPGR+L I+DE D+ML+ L D++ I
Sbjct: 123 SLRGA--RIVVGTPGRLLDLAQQGKLNLSTVTTLIVDEADRMLD-LGFSEDLEAI 174
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 87.0 bits (206), Expect = 6e-16
Identities = 54/204 (26%), Positives = 99/204 (48%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+ F L ++R + + G+E+ + +Q + I + G D+L + +G GKT F++ +
Sbjct: 55 TSFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPII 114
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
+ + L++ TRELA QI +E++ SK M + + F GG I D +VL
Sbjct: 115 EHALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMR-LHSATFIGGTNINTDMKVLSRK 173
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETG 802
H++VGTPGR+L +LDE D+ML+ + DV+++ E
Sbjct: 174 L-HVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLD-MGFVNDVKKLVGGMTQREQT 231
Query: 803 DDVLSHIE*RNQTCV*KFMQDPME 874
+ +E + + +++P+E
Sbjct: 232 MLFSATLEPNQKNLIQSLLKNPVE 255
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 87.0 bits (206), Expect = 6e-16
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D + +++ + G P+EVQ + IP + G D++ +++G GKT FVL +
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L Y LV+ TREL+ QI++ + F +G+RV + GG L P
Sbjct: 63 LLQKNRSFYCLVVAPTRELSSQIAECFNMFQ--ATGLRVCLLVGGANFNVQANQLSKR-P 119
Query: 629 HIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 772
H+VVGTPGRI F+LDE D+ E D D++ I
Sbjct: 120 HVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQ-DFVEDLETI 167
>UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA
helicase-like; n=9; Eukaryota|Rep: Myc-regulated DEAD/H
box 18 RNA helicase-like - Ostreococcus tauri
Length = 2729
Score = 86.6 bits (205), Expect = 8e-16
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Frame = +2
Query: 203 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDC-GFEHPSEVQHECIPQAVLGM 379
G+ A + E +GS ++ F + L RAI D GF H + VQ +P + G+
Sbjct: 2181 GTLARAVRVESQGSNAPSSTAAFANMGLTEASARAIRDVMGFTHATSVQDATLPHIMQGL 2240
Query: 380 DILCQAKSGMGKTAVFVLATLQQL----EPSESHVYVLVMCHTRELAFQISKEYERFSKY 547
D+L +AK+G GKT F+L +++L P +V LV+ TRELA QI +E + +
Sbjct: 2241 DVLARAKTGSGKTVGFLLPAIERLARAGAPQRGNVSCLVISPTRELASQIGEEAKSLLSF 2300
Query: 548 MSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL--AXXXXXXXXXXXXXXFILDE 721
+ V FGG I + + LKT ++ TPGR++ +LDE
Sbjct: 2301 -HPFKCQVVFGGTNINSERKRLKTEPVEFLIATPGRLIDHFESGDLARACQNLDVLVLDE 2359
Query: 722 CDKMLESLDMRRDVQEIXRNTPH 790
D++L+ + R +++I P+
Sbjct: 2360 ADQLLD-MGFRPSLEKILSFLPN 2381
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 86.6 bits (205), Expect = 8e-16
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Frame = +2
Query: 233 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 412
V G H F L+ E++ + + P+ +Q IP + G D++ A++G G
Sbjct: 164 VSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSG 223
Query: 413 KTAVFVLATLQQLEPSESHV-------YVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 571
KTA F+L + L E + Y++++ TRELA QI E +F+ + + ++V V
Sbjct: 224 KTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFA-HGTKLKVCV 282
Query: 572 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+GG +Q ++++ C H++V TPGR+L +LDE D+ML+
Sbjct: 283 SYGGTAVQHQLQLMRGGC-HVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLD 337
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 86.6 bits (205), Expect = 8e-16
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Frame = +2
Query: 227 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 406
+ KG + +S F+ L +LRAI GF+ P+ +Q + IP + G D++ A++G
Sbjct: 57 RRTKGKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTG 116
Query: 407 MGKTAVFVLATLQQLEP--SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFG 580
GKTA FV+ ++ L+ + S+ L++ RELA Q K + FSK + +R G
Sbjct: 117 SGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSK-GTDLRSVAIVG 175
Query: 581 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
G+ +++ +L + P IVV TPGR L + DE D++ E
Sbjct: 176 GVSLEEQFSLL-SGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFE 227
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 86.2 bits (204), Expect = 1e-15
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAVFVLATLQ 445
F F L ++ A+ D GF P+ +Q + +P + G D + A +G GKTA F + ++
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 446 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 625
++ + LV+ TRELA Q++++ K GVRV +GG + + +K
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGK-KKGVRVVTIYGGASYRTQIDGIKRGA 164
Query: 626 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
HIVV TPGR++ +LDE D+ML S+ + ++ I T
Sbjct: 165 -HIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEML-SMGFKEALETILSAT 215
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 86.2 bits (204), Expect = 1e-15
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F F L P ++ A+ GF +P+ +Q + +P A+ G DIL A +G GKTA FVL L +
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 449 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
L E + + LV+ TREL QI +E + +++ +R + +GG+ + L+
Sbjct: 118 LLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCR-LRSATVYGGVGMHAQTVQLR 176
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
T IV+ PGR+L +LDE D M + + DV+EI T
Sbjct: 177 TGV-DIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFD-MGFLSDVREILHCT 230
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 86.2 bits (204), Expect = 1e-15
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Frame = +2
Query: 203 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 382
G E A K KG + + F + L + RA G++ P+ +Q IP A+ G D
Sbjct: 129 GFQERAVVKGAKGD-TTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRD 187
Query: 383 ILCQAKSGMGKTAVFVLATLQQL-----EPSESHVYVLVMCHTRELAFQISKEYERFSKY 547
+ +A +G GKTA F+L L+++ P+ + +VLV+ TRELA Q+ + E +++
Sbjct: 188 VCGRAVTGSGKTAAFMLPQLERMLHRGPRPAAA-THVLVLVPTRELAVQVHQMTESLAQF 246
Query: 548 MSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDEC 724
+ +R + GG+ L+T P IVV TPGR++ ILDE
Sbjct: 247 TT-IRAVLVVGGLSANVQAAALRTR-PEIVVATPGRVIDHVRNTHSFGLEDLATLILDEA 304
Query: 725 DKMLESLDMRRDVQEIXRNTP 787
D++LE + +++EI R P
Sbjct: 305 DRLLE-MGFLEEIKEIVRQCP 324
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 86.2 bits (204), Expect = 1e-15
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
+ F+ L+P +L IV G+ P+ VQ IP + G DI+ A++G GKTA F+L
Sbjct: 260 AESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPM 319
Query: 440 LQQLEPSE--SHVYV-------LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 592
L + + S+ + LV+C TRELA QI +E +FS + S + V +GG
Sbjct: 320 LHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFS-HSSVAKCCVAYGGAAG 378
Query: 593 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
+ + + C HI+V TPGR+L +LDE D+ML+
Sbjct: 379 FHQLKTIHSGC-HILVATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLD 426
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 86.2 bits (204), Expect = 1e-15
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 439
S F L E+ ++ G++ P+ +Q E +P A+ G DI+ A++G GKTA F L
Sbjct: 50 SPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPI 109
Query: 440 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
LQ+L Y L++ TREL QIS++ + GV V GG+ + +
Sbjct: 110 LQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTL-GVTVVTLVGGLD-HNTQAIALA 167
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 766
PH+VVG+PGR++ +LDE D++L SLD +Q
Sbjct: 168 KKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLL-SLDFDAALQ 216
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 86.2 bits (204), Expect = 1e-15
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIP--QAVLGMDILCQAKSGMGKTAVFVLATLQQLEP 457
L P +L+ + GF PSE+Q I + ++ QA+SG GKT F + L +++
Sbjct: 98 LPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVLSKIDV 157
Query: 458 SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIV 637
S+ LV+ TRELA QI ++ + G+ +++F GG D + + PHI
Sbjct: 158 SQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQARAASHPHIC 217
Query: 638 VGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES--LDMRRDVQE 769
+ TPGR L +LDE D+ML ++ D+ E
Sbjct: 218 ICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIME 263
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 86.2 bits (204), Expect = 1e-15
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +++A D G+ HP+ VQ + IP + G D+L + +G GKTA F+L +Q+
Sbjct: 118 FHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPIMQR 177
Query: 449 LEPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
++ Y L++ TRELA Q + +E+ +KY + ++ G +PIQ+ E L+
Sbjct: 178 FGNLKNLQYSKALIILPTRELALQCFEMFEKLNKY-ANCTAALVIGAVPIQQQETELR-K 235
Query: 623 CPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNT 784
P I++ TPGR + + DE D+++E + +++++I + T
Sbjct: 236 YPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLME-MGFEKEIRQILQAT 289
>UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 430
Score = 86.2 bits (204), Expect = 1e-15
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F DF L P+++ A+ GF + + +Q +P + G D+ QA++G GKT F+ +T
Sbjct: 11 FSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70
Query: 449 L-------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
L E + L+M TRELA QI + E S +++G+++ + +GG K +
Sbjct: 71 LLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALS-HLTGLKLGLAYGGDGYDKQLK 129
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
VL+ I+VGT GR++ +LDE D+M + L +D++ + R P
Sbjct: 130 VLENGV-DILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYD-LGFIKDIRWLFRRMP 187
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 85.8 bits (203), Expect = 1e-15
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F + L +L+A+ F +P+ +Q IP A++G DI A +G GKTA ++L TL++
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 449 L--EPSESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
L P + V VLV+ TREL Q+ + ++ S++ S V V + GG+ ++ E VL+
Sbjct: 216 LLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTS-VEVGLSVGGLDVKVQESVLRK 274
Query: 620 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLE 739
P IV+ TPGR++ ILDE D+ML+
Sbjct: 275 N-PDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLD 314
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 85.8 bits (203), Expect = 1e-15
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Frame = +2
Query: 254 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 433
I S F D ++ +++ + + P+ VQ + IP + G D+L A++G GKTA F L
Sbjct: 4 IMSVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGL 63
Query: 434 ATLQQLEPSESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 607
+Q ++ + + + L++ TRELA Q+ +++++ + +R+ +GG I +
Sbjct: 64 PIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEH-TDLRIVCVYGGTSIGVQKN 122
Query: 608 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
L+ I++ TPGR+L +LDE D+ML+ + D+Q I R P
Sbjct: 123 KLEEGA-DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLD-MGFWPDLQRILRRLP 180
Query: 788 HGETGDDVLSHIE*RNQTCV*KFMQDPMEXYV 883
+ + + E R +T K M P+E V
Sbjct: 181 NDKQIMLFSATFEKRIKTIAYKLMDSPVEVEV 212
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 85.8 bits (203), Expect = 1e-15
Identities = 50/158 (31%), Positives = 77/158 (48%)
Frame = +2
Query: 263 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 442
+GF F L P IL+A+ F+ PS +Q E IP D++ +++G GKTA +
Sbjct: 15 NGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGKTATCAIPIC 74
Query: 443 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 622
++ + + L++ TRELA Q + E ++ KY GV+ FGG + LK
Sbjct: 75 NRVNTELTDIQALIIVPTRELALQYATETQKIGKY-KGVKAFAIFGGEDSALQQSKLKHG 133
Query: 623 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
++V TPGR++ ILDE D+ML
Sbjct: 134 V-QVLVATPGRLIDFIYSRQIDLSHVETLILDEADEML 170
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 85.8 bits (203), Expect = 1e-15
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F L +IL+A G+ P+ +Q CIP A+ G DI A +G GKTA FVL L++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 449 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 619
+ S VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRS 268
Query: 620 ACPHIVVGTPGRIL 661
P +VV TPGR++
Sbjct: 269 G-PDVVVATPGRLI 281
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,636,888
Number of Sequences: 1657284
Number of extensions: 16764196
Number of successful extensions: 40623
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 38555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39872
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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