Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O21
(895 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 293 9e-80
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 290 9e-79
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 113 2e-25
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 112 3e-25
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 112 3e-25
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 89 4e-18
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 3e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 76 3e-14
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 75 8e-14
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 75 1e-13
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 69 4e-12
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 61 1e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 54 2e-07
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 46 5e-05
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 45 7e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 40 0.004
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 39 0.005
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 293 bits (720), Expect = 9e-80
Identities = 136/176 (77%), Positives = 151/176 (85%)
Frame = +2
Query: 224 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 403
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 404 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 583
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 584 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 751
+ I+KD++ LKT CPHIVVGTPGRILA FILDECDKMLE LD+
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQLDL 209
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 290 bits (712), Expect = 9e-79
Identities = 135/174 (77%), Positives = 149/174 (85%)
Frame = +2
Query: 224 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 403
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 404 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 583
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 584 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 745
+ I+KD++ LKT CPHIVVGTPGRILA FILDECDKMLE L
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQL 207
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 113 bits (272), Expect = 2e-25
Identities = 56/157 (35%), Positives = 87/157 (55%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F LL P +LR + + GFE PS +Q + IP G+D++ QAKSG GKT VF + L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
+ + + ++++ TRE+A Q+ + G+ VF GG+ +++D++ LK+
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSC-- 132
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
HI VGTPGR+ FILDE DK+L+
Sbjct: 133 HIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLD 169
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 112 bits (270), Expect = 3e-25
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 6/179 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 610
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++V TPGR+L ++DE DK+L S+D ++ +++I ++ P
Sbjct: 168 FVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL-SMDFKKMLEQIIKHLP 225
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 112 bits (270), Expect = 3e-25
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 6/179 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 610
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 611 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
H++V TPGR+L ++DE DK+L S+D ++ +++I ++ P
Sbjct: 168 FVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL-SMDFKKMLEQIIKHLP 225
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 89.0 bits (211), Expect = 4e-18
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = +2
Query: 311 VDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMC 490
V G + P+E+Q C+P + G D + AK+G GKTA F L LQ+L ++ +V+
Sbjct: 23 VAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLT 82
Query: 491 HTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXX 670
TRELAFQI+ +++ + + G++ +V GG+ + K L PH+V+ TPGR+
Sbjct: 83 PTRELAFQIADQFKVLGRPI-GLKEAVIVGGLDMMKQALSLANK-PHVVIATPGRLADHI 140
Query: 671 XXXXXXXXXXXXF-ILDECDKMLE 739
F +LDE D++L+
Sbjct: 141 KSTDTLNLKKIQFLVLDEADRLLD 164
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 89.0 bits (211), Expect = 4e-18
Identities = 61/188 (32%), Positives = 84/188 (44%)
Frame = +2
Query: 320 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 499
GFE PS +Q I + G D++ QA+SG GKTA F ++ LQ ++ LV+ TR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 500 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 679
ELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 76 ELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRVFDMIRRR 133
Query: 680 XXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTPHGETGDDVLSHIE*RNQTCV*KFM 859
+LDE D+ML + + ++ R P + + + KFM
Sbjct: 134 NLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFM 192
Query: 860 QDPMEXYV 883
DP+ V
Sbjct: 193 TDPIRILV 200
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 81.4 bits (192), Expect = 9e-16
Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Frame = +2
Query: 92 SEYDTVNKLIKLKKIMXXXXXXXXXXXXXXXXXXXXXGSTEVAPKKEVKGSYVSIHSSGF 271
S+ + VNK K KK G E ++VKGS + + +
Sbjct: 75 SKVEPVNKKKKKKKKKVAKKKDNDTVTQQETQEKEKGGDAEGLSNQKVKGSLIDMPE--W 132
Query: 272 RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQ 448
+ P+ILRA+ D GF P+ +Q IP A+L DI+ A++G GKT F + +Q
Sbjct: 133 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQH 192
Query: 449 LE----------PS------ESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSV 571
+E PS ES Y L+M TRELA Q+ + +KY S V+V+
Sbjct: 193 IEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTS-VKVAA 251
Query: 572 FFGGMPIQKDEEVLKTACPHIVVGTPGRI 658
GGM K + +LK P IVV TPGR+
Sbjct: 252 IVGGMAAPKQQRLLKQR-PEIVVATPGRL 279
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 79.8 bits (188), Expect = 3e-15
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Frame = +2
Query: 212 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 391
E P K V G + F + +++ I G+ P+ VQ +P + G D++
Sbjct: 463 ENIPSK-VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
Query: 392 QAKSGMGKTAVFVLATL-----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG 556
A++G GKTA ++L L Q L L + TRELA QI E +FS + +
Sbjct: 522 CAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH-TP 580
Query: 557 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 736
++V V +GG+ + L+ C H +VGTPGR+ ILDE D+ML
Sbjct: 581 IKVCVCYGGVSVPYQASQLERGC-HFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRML 639
Query: 737 E 739
+
Sbjct: 640 D 640
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 76.2 bits (179), Expect = 3e-14
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Frame = +2
Query: 260 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVL 433
+ F + L + R + D GF PS++Q +P + ++++ Q++SG GKTA FVL
Sbjct: 102 AKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVL 161
Query: 434 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 613
L +++ ++ + V+ + T ELA Q K E K+ ++++ G + ++
Sbjct: 162 TMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQK-- 219
Query: 614 KTACPHIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKML 736
HI++GTPG +L F+LDE D M+
Sbjct: 220 --CTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMI 259
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 76.2 bits (179), Expect = 3e-14
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQ--------------HECIPQAVL--------GMD 382
F D LK +LR I GFE PS +Q H C Q L D
Sbjct: 65 FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLSARD 124
Query: 383 ILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLVMCHTRELAFQISKEYERFSK 544
++ QA+SG GKTA F ++ LQ+++ + LV+ TRELA QI K
Sbjct: 125 VIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGD 184
Query: 545 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDEC 724
YM V+ GG +++D L+ H+VVGTPGR+ F+LDE
Sbjct: 185 YMH-VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRVFDMINRGVLNTRDIKLFVLDEA 242
Query: 725 DKMLESLDMRRDVQEIXRNTP 787
D+ML S + + ++ P
Sbjct: 243 DEML-SRGFKDQIYDVFTRLP 262
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 74.9 bits (176), Expect = 8e-14
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Frame = +2
Query: 248 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 427
V+ F F + + + + D G + +Q G D++ QA++G GKT F
Sbjct: 68 VAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSF 127
Query: 428 VLATLQQLEPSESHVY------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP 589
L +++L+ + VLVM TRELA Q+ E+E S + V +GGMP
Sbjct: 128 ALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLK---SNLEVYCIYGGMP 184
Query: 590 IQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQE 769
+ E + + ++VGTPGRIL +LDE D+ML+ + V+E
Sbjct: 185 YEPQENAINSGL-DVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLD-MGFAESVEE 242
Query: 770 I 772
+
Sbjct: 243 V 243
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 74.5 bits (175), Expect = 1e-13
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = +2
Query: 380 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 559
D++ A++G GKT F L LQ L + ++ L++ TRELAFQIS++ E + GV
Sbjct: 3 DVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGI-GV 61
Query: 560 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKML 736
+ +V GG+ + + ++ PHI++ TPGR++ + ++DE D++L
Sbjct: 62 KCAVIVGGIDMM-SQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRIL 120
Query: 737 ESLDMRRD--VQEIXRNTPHGETGDDV 811
++D ++ + + R G +G V
Sbjct: 121 -NMDFEKEDYIHRVGRTARAGRSGRSV 146
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 72.1 bits (169), Expect = 6e-13
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = +2
Query: 230 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 409
+V G+ + F F +++ +I + P+++Q + +P A+ G DI+ AK+G
Sbjct: 506 KVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGS 565
Query: 410 GKTAVFVL-ATLQQLEPSESHV----YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 574
GKTA F+ A + ++ E V VL+ TREL QI E RF K + V+VF
Sbjct: 566 GKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVF 625
Query: 575 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
GG ++ + + + A IVV TPGR++ + DE D+M +
Sbjct: 626 GGGNKYEQSKALQEGA--EIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFD 678
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 69.3 bits (162), Expect = 4e-12
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF---VLAT 439
F DF + L ++ GF P+++Q + IP A+ G D+L AK+G GKT F ++ T
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 440 L-QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE-VL 613
L +Q S + LV+ TRELA+Q + + + + GG ++ +++ ++
Sbjct: 112 LWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGN-KHDLSAGLIIGGKDLKNEQKRIM 170
Query: 614 KTACPHIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
KT +IVV TPGR+L +LDE D++L+ + + I N P
Sbjct: 171 KT---NIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILD-MGFAPTLNAIIENLP 225
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +2
Query: 302 RAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EPSES-HV 472
RA+ + GF HP+ +Q IP A++G D+ A +G GKTA F+L L++L P++S +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAI 82
Query: 473 YVLVMCHTRELAFQ 514
VLV+ TRELA Q
Sbjct: 83 RVLVITPTRELAIQ 96
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 60.5 bits (140), Expect = 2e-09
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Frame = +2
Query: 299 LRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSES 466
L+ I D GF +E+QH+ I + G D+L AK+G GKT F++ ++ L + +
Sbjct: 584 LQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRN 643
Query: 467 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 646
V+++ TREL+ Q K+ + GG+ + + E L+ ++++ T
Sbjct: 644 GTGVIIISPTRELSLQTYGVARDLLKH-HNFTYGIIMGGVNRKAEAERLQKGV-NLLIAT 701
Query: 647 PGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIXRNTP 787
PGR+L ++DE D++LE + ++++I R P
Sbjct: 702 PGRLLDHLQNTQGFLYKNLQCLVIDEADRILE-IGFEEEMRQIIRILP 748
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 54.0 bits (124), Expect = 2e-07
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +2
Query: 236 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 415
KG + +++ + IL + G++ P+ +Q + IP + DI+ A++G GK
Sbjct: 92 KGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGK 151
Query: 416 TAVFV---------LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 568
TA F L +++ ++ Y L++ TRELA QI +E +F + + G+R
Sbjct: 152 TAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL-GIRTV 210
Query: 569 VFFGG 583
GG
Sbjct: 211 SVIGG 215
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 46.0 bits (104), Expect = 4e-05
Identities = 44/157 (28%), Positives = 66/157 (42%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 448
F D L +L + G++ P+ VQ IP D++ A++G GKTA F++ L
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPIL-- 934
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
S +Y+ + FS Y S R V +GG I L C
Sbjct: 935 -----SRIYM-----------EGPPAPPDFS-YRSLCRPCVVYGGADIGSQLRELDRNC- 976
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
H++V TPGR++ +LDE D+ML+
Sbjct: 977 HLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLD 1013
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 45.6 bits (103), Expect = 5e-05
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Frame = +2
Query: 284 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 463
L+ ++L+A+ P+ +Q IP+ + ++C A++G GKT ++ + +L E
Sbjct: 385 LRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVHRLREDE 444
Query: 464 SHVYVL---------VMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 616
+L ++ RELA QI K + + + R GG + + L+
Sbjct: 445 ERHGILARLKRPRACIVVPARELATQILKTAKSLCHH-ARFRSVGLIGGRKQKWMRDDLE 503
Query: 617 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES 742
+ ++V TPG +L ++DE D M ++
Sbjct: 504 SPV-DLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDA 544
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 45.2 bits (102), Expect = 7e-05
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +2
Query: 449 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 628
L+P + + VLV+C TRELA Q+ + K+ +R + +GG P L+
Sbjct: 127 LQPGDGPI-VLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV- 183
Query: 629 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 739
I + TPGR++ +LDE D+ML+
Sbjct: 184 EICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLD 220
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 269 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF------V 430
F D L PE+ + F+ P+ +Q + + + G DI+ A++G GKT + +
Sbjct: 74 FHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCML 133
Query: 431 LATLQQLEPSESHVYVLVMCHTRELAFQI 517
L T P ++ V L++ TREL Q+
Sbjct: 134 LRTKAPSNPGDTPV-ALILTPTRELMQQV 161
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +2
Query: 479 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 658
LV+ TRELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 64
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/94 (27%), Positives = 40/94 (42%)
Frame = +2
Query: 92 SEYDTVNKLIKLKKIMXXXXXXXXXXXXXXXXXXXXXGSTEVAPKKEVKGSYVSIHSSGF 271
S+ + VNK K KK E ++V+GS + + S +
Sbjct: 17 SKVEPVNKKKKKKKKKVAKKKDNDNVTQQESQEKEKGSDAEGLSNQKVQGSLIDM--SEW 74
Query: 272 RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 373
+ P+ILRA+ D GF P+ +Q IP A+L
Sbjct: 75 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALL 108
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 32.7 bits (71), Expect = 0.41
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +2
Query: 206 STEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHEC--IPQAVLGM 379
ST+ A S S+ + F L E+L + G H S VQ + A+L +
Sbjct: 376 STQPARLASTPASIASLFNGYFSSLCLGSELLELV---GIPHLSSVQLRTQEVQNALLAL 432
Query: 380 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVL 481
D+ +A G + T QQ+ PS +H+Y L
Sbjct: 433 DVN-EASGSDGIPCRLLKETAQQIAPSLTHLYNL 465
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 588 GIPP-KNTDTLTPDIYFEKRS--YSLLIWKANSLVWH-ITST*TWLSEGSSCC 442
GIP N TP I+ + +S Y +LIW A L+W I + L G CC
Sbjct: 109 GIPSLSNPKCYTPQIFEDVKSVWYWILIWIAGPLIWFTIIAVFALLVFGMYCC 161
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 429 TNTAVLPIPDLA*QSMSIPRTACGMHSC*TSEGCSKPQSTIARSISGLSKKSLKPELWM 253
T T + P LA ++ + P T + SE P+ST+A + + +L+PE M
Sbjct: 2435 TGTTIAPETTLALETTTAPETTLPPETTMASESTLAPESTLAPETTMVPGTTLEPETTM 2493
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 549 CQESECQYSLVVCQFRKTRKSLRQHVLTL*WELPVEF 659
C+ S C + CQF + +R H+ T +E EF
Sbjct: 320 CEHSRCPHQAYGCQFEGNNEQVRSHLETCKFEAVKEF 356
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 557 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 658
V+ GG +++D L+ H+VVGTPGR+
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 35
>SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 132 KSWLTTTIFSTTKMKNKQINRLLTGLPKWRQRRRLKDPTYPST 260
KS T S TK +++ + P W++R R K T P+T
Sbjct: 662 KSARTYLALSRTKRQSRSASTSRIRYPTWKRRNRAKRKTLPAT 704
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,569,349
Number of Sequences: 59808
Number of extensions: 566752
Number of successful extensions: 1370
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -