Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O20
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 34 0.14
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.24
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 32 0.55
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
01_07_0082 - 40965947-40967023 31 1.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.7
05_01_0142 - 940421-940701,941262-941574 30 2.2
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.9
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 29 3.9
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.8
07_03_1160 - 24430240-24431268 29 6.8
03_06_0187 + 32209924-32210634 29 6.8
03_02_0457 + 8638318-8638336,8640394-8640497,8640613-8640778,864... 24 7.0
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 34.3 bits (75), Expect = 0.14
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -2
Query: 577 PVSPXGXAXKPXXPPXP--PXGGXYGGGXG--XXPQXPXPFXRGXGGXLXXGG--XSPPX 416
P P P PP P P GG GGG G P P+ G GG GG PP
Sbjct: 57 PPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPP 116
Query: 415 PG 410
G
Sbjct: 117 TG 118
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.5 bits (73), Expect = 0.24
Identities = 24/67 (35%), Positives = 25/67 (37%)
Frame = +3
Query: 414 GXGGXXPPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXGGXGGXXGFXAXPXGETGXPKXX 593
G G PP P PR G G P PPP PP G G G P G P+
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPG-----PGPPP--PP--GAAGRGGGGPPPPALPGGPRAR 396
Query: 594 GXHQXKK 614
G KK
Sbjct: 397 GPPPFKK 403
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 583 GXPVSPXGXAXKPXXPPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPPXPG 410
G P P P PP P G G G P P P G PP PG
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGP-PPPPPPAAPAAPRPPGPGPGPPPPPG 375
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 432 PPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXGGXGGXXGFXAXPXGETGXP 584
PP PP P G P PP PP G G G P P
Sbjct: 282 PPPPAPPPLP-PSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAP 331
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 577 PVSPXGXAXKPXXPPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPP 419
P +P A P P PP + G P P P G G G PP
Sbjct: 273 PAAPPPPAGPPPPAP-PPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPP 324
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 32.3 bits (70), Expect = 0.55
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 538 PPXPPXGGXYGGGXGXXPQXPXPFXR-GXGGXLXXGGXSPPXP 413
P PP G YGGG G PQ + + GG GG SPP P
Sbjct: 294 PQAPPLG--YGGGYGYPPQGSSSYNQYAYGG--YYGGASPPPP 332
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Frame = +3
Query: 432 PPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXGGXGG-----XXGFXAXPXGETGXPKXXG 596
PP PP P KG P PPP PP G GG G + P G P
Sbjct: 348 PPAKGPPPPPPPKG-------PSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTGSA 400
Query: 597 XHQXK 611
Q K
Sbjct: 401 DQQAK 405
>01_07_0082 - 40965947-40967023
Length = 358
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 583 GXPVSPXGXAXKPXXPPXPPXGGXYGGGXGXXPQ 482
G P P PP PP G YGGG G PQ
Sbjct: 263 GYPAQPPPPQAGYGYPPPPPQAG-YGGGYGYPPQ 295
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 538 PPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPPXP 413
PP PP G GG G P + G GG GG P P
Sbjct: 358 PPNPPYSGGAPGGQG---SLPPSYDGGYGGRPMPGGGGPGAP 396
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +2
Query: 425 GXXPXXXXTPXPPGKGXXXLGXXPXPPPVXPXXXGXXGXXGFXGXXXGGNRXPQGXGXPP 604
G P P PPG G P PP P G G+ GG PQ G PP
Sbjct: 39 GYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGY--PPPGG--YPQHGGYPP 94
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +3
Query: 420 GGXXPPXXX---KPPXPRXKGXGFWGXXPXPPP*XPPXGGXGGXXGFXAXPXGETGXPKX 590
GG PP PP P +G G G P PP P G G P G G P
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPG-APAPPMPPGVPGGPPPPPGGRGLPAP 1229
Query: 591 XG 596
G
Sbjct: 1230 PG 1231
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 538 PPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPPXP 413
PP PP GG G P P F G GG +PP P
Sbjct: 1149 PPPPPVGGL---GGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 408 IPGX-GGXXPPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXGGXGG 539
+PG GG P PP G G P PP PP G G
Sbjct: 1052 LPGEVGGAPSPPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYG 1096
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = -2
Query: 547 PXXPPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPPXPGILKTKXXP 386
P P P GG P P RG G + SPP PG + + P
Sbjct: 49 PPRAPGSPVPDDDDGGGADPFSSPAPIGRGRGEAVIPSVSSPPLPGAGRGRGSP 102
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 432 PPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXG 527
P PP P G G +G P PPP P G
Sbjct: 78 PDYYDPPPSPYYGGGGGYGKPPPPPPCCPCKG 109
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 420 GGXXPPXXXKPPXPRXKGXGFWGXXPXPPP*XPPXGGXGG 539
G PP PP R G G P PPP PP G
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPP-PPPANRSNG 726
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 432 PPXXXKPPXPRXKGXGFWGXXPXPPP*XPP 521
PP PP P F P PPP PP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPP 574
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 348 PXKPGKXXRXXXXGXXXVLRIPGXGGXXPPXXXKPPXPRXKGXGFWGXXPXPPP*XPP 521
P KP + + G + P PP +PP P G P P P PP
Sbjct: 251 PPKPDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQPPQPNPNGPSKPDQPPRPNPDMPP 308
>03_06_0187 + 32209924-32210634
Length = 236
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = -2
Query: 577 PVSPXGXAXKPXXPPXPPXGGXYGGGXGXXPQXPXPFXRGXGGXLXXGGXSPPXPGIL 404
PV+P P PP G GG P P P G G PP P ++
Sbjct: 175 PVNPGAVVPAVPALPVPPIPGAAGGVVPTLPVPPLPAVPGVPLPEVPGVPLPPVPSVV 232
>03_02_0457 +
8638318-8638336,8640394-8640497,8640613-8640778,
8641403-8641467
Length = 117
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 688 GGPXGKXPXXGPXGG 644
GGP G P GP GG
Sbjct: 60 GGPGGGGPGGGPYGG 74
Score = 23.0 bits (47), Expect(2) = 7.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 526 PXGGXYGGGXG 494
P GG YGGG G
Sbjct: 67 PGGGPYGGGRG 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,463,406
Number of Sequences: 37544
Number of extensions: 286313
Number of successful extensions: 1164
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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