Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O16
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 81 3e-16
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 71 2e-13
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 67 4e-12
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 64 2e-11
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 62 8e-11
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 62 8e-11
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 61 2e-10
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 59 1e-09
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 52 1e-07
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 49 1e-06
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 48 2e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 46 7e-06
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 43 7e-05
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 43 7e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 31 0.22
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.51
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr... 30 0.51
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 29 0.67
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 26 6.3
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 26 6.3
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 80.6 bits (190), Expect = 3e-16
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Frame = +1
Query: 94 KVVLVTXXXXXXXXXXXVHFAKEGADVAIVGRNVTKLD-NVARECAQ-VGKKPLIIKADI 267
K L+T V FA+EG+D+ I + D V R+ + G+ I + +
Sbjct: 43 KKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWEGKL 102
Query: 268 SNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVILITS 447
+ +++V + G +DVL+NN A + + E +D TN+ + +T
Sbjct: 103 DKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTK 162
Query: 448 LAAPHLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPRGVRANII 627
A H+ ++ +I+N SSI V P L Y K ++ FTRG++ + A G+R N +
Sbjct: 163 AAISHM-KSGSSIVNCSSINA-YVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAV 220
Query: 628 SPGPVLTDIL 657
+PGP+ T ++
Sbjct: 221 APGPIYTPLV 230
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 711 LKKIGEPSEIAELMLFLASDKARSITGSNYVSDNGMLL 824
L ++G+P E+A LFLA +TG + G ++
Sbjct: 247 LGRMGQPVEVASCYLFLACSDGGYMTGQTLHPNGGTVI 284
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 71.3 bits (167), Expect = 2e-13
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Frame = +1
Query: 181 VGRNVTKLDNVARECAQVGKKPLIIKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNK 360
+G V +D V + ++V L ++AD+S ++ + +++ I G +DVLINNA +
Sbjct: 28 LGDRVAGIDIV--DPSKVQDAALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGL-- 83
Query: 361 AGSLLAGNLL-ESYDAVTATNLRAVILITSLAAPHLIETK--GNIINVSSIGGTMVPMPG 531
A L ES+D + LR L PH+ + G+I+N+ S+ G + G
Sbjct: 84 ADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYL--G 141
Query: 532 FLAYCMGKASLNHFTRGIALELAPRGVRANIISPGPVLTDILEE 663
AY KA L + T+ +A+ P G+R N+ +PG + + +E
Sbjct: 142 SPAYSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDE 185
Score = 32.7 bits (71), Expect = 0.072
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 717 KIGEPSEIAELMLFLASDKARSITGSNYVSDNGML 821
++G P ++A ++FLA K ITG+ D G+L
Sbjct: 205 RLGTPEDVARAVIFLADSKNSFITGTTLYVDGGLL 239
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 66.9 bits (156), Expect = 4e-12
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +1
Query: 151 FAKEGADVAIVGRNVTKLDNVARECAQVGKKPLIIKADISNDEEAKNIVQQTIDAF--GK 324
F +EG V R V ++DN+ + Q +K D++ DE++ V+Q + F G
Sbjct: 25 FHQEGFQVLATARQVERMDNLTKAGLQT------LKLDVT-DEDSVREVEQEVRKFTNGS 77
Query: 325 LDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVILITSLAAPHLIETKGNIINVSSI 504
L LINNA + + + +E V N VI + LI KG I+NV+S+
Sbjct: 78 LHYLINNAGAPCSAPAIDLD-IEDVSKVMDVNFYGVIRMNKAFQHQLIRAKGTIVNVNSL 136
Query: 505 GGTMVPMPGFLAYCMGKASLNHFTRGIALELAPRGVRANIISPGPVLTDI 654
+ VP AY KA+L ++ + +ELAP GV+ I G V T I
Sbjct: 137 -VSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 64.5 bits (150), Expect = 2e-11
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Frame = +1
Query: 151 FAKEGADVAIVGRNVTKLDNVARECAQV-GKKPLIIKADISNDEEAKNIVQQTIDAFGKL 327
++++G IVGRN L + + G++ + AD+ +D + + ++++ +
Sbjct: 21 WSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDMKNLKSIFESVE----I 76
Query: 328 DVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVILITSLAAPHLIETKGN-----IIN 492
D +++ A + ++ SL + D++ TNL + I ++ +A K + I+N
Sbjct: 77 DTVVHAAGVLQS-SLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILN 135
Query: 493 VSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPRGVRANIISPGPVLTDIL 657
+SS T +PG Y KA L FT+ +A E+A +G+R N ISPG V T +L
Sbjct: 136 ISSRLSTYA-LPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML 189
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 62.5 bits (145), Expect = 8e-11
Identities = 41/139 (29%), Positives = 67/139 (48%)
Frame = +1
Query: 247 LIIKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLR 426
L+ + D++N K V++ I FG++DVL+NNA + L + + ++
Sbjct: 17 LVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG 76
Query: 427 AVILITSLAAPHLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPR 606
A+ +I ++ + G IINVSSIGG M G L Y K ++ + + E+
Sbjct: 77 ALEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGT-KYAIEGISEALTWEMQSI 135
Query: 607 GVRANIISPGPVLTDILEE 663
GV+ II PG T+ E
Sbjct: 136 GVKVKIIEPGFTATEFRVE 154
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 62.5 bits (145), Expect = 8e-11
Identities = 41/139 (29%), Positives = 67/139 (48%)
Frame = +1
Query: 247 LIIKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLR 426
L+ + D++N K V++ I FG++DVL+NNA + L + + ++
Sbjct: 17 LVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFG 76
Query: 427 AVILITSLAAPHLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPR 606
A+ +I ++ + G IINVSSIGG M G L Y K ++ + + E+
Sbjct: 77 ALEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGT-KYAIEGISEALTWEMQSI 135
Query: 607 GVRANIISPGPVLTDILEE 663
GV+ II PG T+ E
Sbjct: 136 GVKVKIIEPGFTATEFRVE 154
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 60.9 bits (141), Expect = 2e-10
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Frame = +1
Query: 94 KVVLVTXXXXXXXXXXXVHFAKEG-ADVAIVGRNVTKLDNVAREC-AQVGKKPLIIKADI 267
K +L+T AK + + R + ++ +A+E ++ L +K D+
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 268 SNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVILITS 447
S+ + +++ F +DVLINNA + + ++ + TN+ ++ +T
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTR 126
Query: 448 LAAP-HLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALELAPRGVRANI 624
P + KG+I+NV SI G + G + YC K++L FT + E +R
Sbjct: 127 AVLPIFYSKNKGDILNVGSIAGRESYVGGSV-YCSTKSALAQFTSALRKETIDTRIRIME 185
Query: 625 ISPGPVLTD 651
+ PG V T+
Sbjct: 186 VDPGLVETE 194
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 58.8 bits (136), Expect = 1e-09
Identities = 36/114 (31%), Positives = 58/114 (50%)
Frame = +1
Query: 253 IKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAV 432
+K D++ E K ++ I FGKLD +I NA + + + +A + + + N +V
Sbjct: 57 VKGDVT--EVGKASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSV 114
Query: 433 ILITSLAAPHLIETKGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALE 594
+ A PHL +TKG I+ VSS G + P + AYC KA++N + E
Sbjct: 115 VETVKYAIPHLRKTKGTIVIVSS-GAAVRVFPAWAAYCCSKAAINMLVMNLGSE 167
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 51.6 bits (118), Expect = 1e-07
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 3/198 (1%)
Frame = +1
Query: 79 MSFTNKVVLVTXXXXXXXXXXXVHFAKEGADVAIVGRNVTKLDNVARECAQVGKKPLIIK 258
MS TNK+ + + V + +E ++ IIK
Sbjct: 1 MSTTNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIK 60
Query: 259 ADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVIL 438
DIS+ E A Q+ A GK+DVL N+ + + + + + +++ TN+ I
Sbjct: 61 LDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIH 120
Query: 439 ITSLAAPHLIETKGNII-NVSSIGGTMVPMPGF--LAYCMGKASLNHFTRGIALELAPRG 609
+ P + + + II SS+ G+M F Y KA+LN + I+ EL G
Sbjct: 121 VYQAFYPLVKKGESKIIVFTSSLVGSMGAFFPFNQSGYGQSKAALNFTMKEISFELQDEG 180
Query: 610 VRANIISPGPVLTDILEE 663
I PG V TD +E
Sbjct: 181 FIVISIHPGMVRTDSAQE 198
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 48.8 bits (111), Expect = 1e-06
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Frame = +1
Query: 241 KPLIIKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATN 420
K L +K D+++ + + + FG +D++INNA G + N+ E + + N
Sbjct: 48 KLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMN-VN 106
Query: 421 LRAVILITSLAAPHLIET--KGNIINVSSIGGTMVPMPGFLAYCMGKASLNHFTRGIALE 594
V IT A + E+ G I+ +SS+ G P P Y K ++ ++ I E
Sbjct: 107 FWGVAYITKEALNLMRESGKGGRILQISSVAG-YYPSPCLSMYNASKFAVEGLSQTIMRE 165
Query: 595 LAPR-GVRANIISPGPVLTD 651
L P + I+ PG + T+
Sbjct: 166 LDPNWNIAITIVQPGGMQTE 185
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 47.6 bits (108), Expect = 2e-06
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 3/198 (1%)
Frame = +1
Query: 79 MSFTNKVVLVTXXXXXXXXXXXVHFAKEGADVAIVGRNVTKLDNVARECAQVGKKPLIIK 258
MS TNK+ + + V +E ++ IIK
Sbjct: 1 MSTTNKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIK 60
Query: 259 ADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAVIL 438
D+S+ E A Q+ +DVL N+A+ + + + +++ TN+ I
Sbjct: 61 LDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIH 120
Query: 439 ITSLAAPHLIETKGNIIN-VSSIGGTMVPM--PGFLAYCMGKASLNHFTRGIALELAPRG 609
+ P + + + II SS+ G+M AY KA+LN+ + I+ EL G
Sbjct: 121 VYQAFYPLIKKGRSKIIVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTMKEISFELQDEG 180
Query: 610 VRANIISPGPVLTDILEE 663
I PG V TD +E
Sbjct: 181 FIVISIHPGAVRTDSAQE 198
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 46.0 bits (104), Expect = 7e-06
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
Frame = +1
Query: 73 DVMSFTNKVVLVTXXXXXXXXXXXVHFAKEGADVAIVGRNVTKLDNVARECAQVGK--KP 246
D+ T KV LVT + A++GA V + GRN K V ++ + K
Sbjct: 36 DIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKI 95
Query: 247 LIIKADISNDEEAKNIVQQTIDAFGKLDVLINNAA-MNKAGSLLAGNLLESYDAVTATNL 423
++ D+ + E + I KL +L+NNA MN L + Y+ TN
Sbjct: 96 RFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTK----DGYELQIQTNY 151
Query: 424 RAVILITSLAAPHLIETKG-------NIINVSSIGGTMVPMPG 531
+ L T L P L T I++V+SI P G
Sbjct: 152 LSHYLFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSG 194
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 42.7 bits (96), Expect = 7e-05
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Frame = +1
Query: 253 IKADISNDEEAKNIVQQTIDAFGKLDVLINNAAMNKAGSLLAGNLLESYDAVTATNLRAV 432
++ D+++ + A Q A +DVL N+ + ++ + E ++A TN+
Sbjct: 59 VELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGP 118
Query: 433 ILITSLAAPHLIETKGN-IINVSSIGGTMVPM--PGFLAYCMGKASLNHFTRGIALELAP 603
I + P L + K +I SS G+M GF AY KA++N + +++ELA
Sbjct: 119 IHVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAINFTMKELSVELAD 178
Query: 604 RGVRANIISPGPVLTDI 654
I PG V TD+
Sbjct: 179 EHFTFISIHPGVVKTDM 195
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 42.7 bits (96), Expect = 7e-05
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Frame = +1
Query: 157 KEGADVAIVGRNVTKLDNVARECAQVGKKPLIIKADISNDEEAKNIVQQTIDAFGKLDVL 336
KEG V R + ++ ++ IIK D+++ AK+ Q +DVL
Sbjct: 29 KEGVTVFASARGPGSASEL-KDWSKTHSNVHIIKLDVTSLRSAKDAAMQVEKVVKCIDVL 87
Query: 337 INNAAMNKAGSLLAGNLLESYDAVTATNLRAVILITSLAAPHLIETK-GNIINVSSIGGT 513
N+ ++K+ + E + + TN+ I + L E K NI+ SS+
Sbjct: 88 WVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSSMAAC 147
Query: 514 M--VPMPGFLAYCMGKASLNHFTRGIALELAPRGVRANIISPGPVLTDI 654
M V + AY KA+LN+ + I+ EL G I PG V TD+
Sbjct: 148 MGGVRPNTYSAYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDM 196
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 717 KIGEPSEIAELMLFLASDKARSITGSNYVSDNG 815
+IG P E+ L+LASD + TGS+ + D G
Sbjct: 219 RIGLPDELPGAYLYLASDASSYCTGSDIIVDGG 251
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 185 PTMATSAPSLAKCTAAEAPIPELPPVTRTTLFVKLITSTPFKVPA 51
P M T+AP+ + A AP+ +LPP +I S + P+
Sbjct: 1463 PGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPS 1507
>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 308
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 568 DSN*LSPCSMQETLALVPWFRRYW 497
D LS C MQ+ L V W +R+W
Sbjct: 79 DPERLSRCKMQDNLEFVQWAKRFW 102
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 29.5 bits (63), Expect = 0.67
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 723 GEPSEIAELMLFLASDKARSITGSNYVSDNG 815
G EIA L+LASD A +G+N + D G
Sbjct: 227 GLAKEIASAYLYLASDAASYASGTNLIVDGG 257
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 405 CVVRFKEVASEQGPGFVHCSVVNEHI*LPEGVNGLLDDVLRFFVI*NVS 259
C V E+ + +G GFVH V E VNG+L + + +V +VS
Sbjct: 197 CKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVS 245
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 714 KKIGEPSEIAELMLFLASDKARSITGSNYVSDNGMLLL 827
K++G E+ L+LAS+ + +TG + + D G L
Sbjct: 224 KRLGLTPELRGTYLYLASNASSFVTGLDLIVDGGYTCL 261
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,367,975
Number of Sequences: 5004
Number of extensions: 65605
Number of successful extensions: 226
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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