Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_O15
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      55   9e-10
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      55   9e-10
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 54.8 bits (126), Expect = 9e-10
 Identities = 26/85 (30%), Positives = 49/85 (57%)
 Frame = +1

Query: 463 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAV 642
           +K+P+NAFM++ +  R K+ ++     ++ I++ LG +W  L   E+  + + A+R R +
Sbjct: 479 IKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQL 538

Query: 643 HMKEHPDYKYRPRRKTKTPGLKNKK 717
           HM+ +PD+     R   T G K K+
Sbjct: 539 HMQLYPDWS---SRANATRGKKRKR 560



 Score = 23.4 bits (48), Expect = 2.5
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 770 SAAP--TAQQPRDVYQMTPNGYMP--NGYMMHDPXCVSTTSI 883
           SA P  T+  P D Y+ +P G +P   G   H P   S  +I
Sbjct: 208 SALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAI 249


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 54.8 bits (126), Expect = 9e-10
 Identities = 26/85 (30%), Positives = 49/85 (57%)
 Frame = +1

Query: 463 VKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAV 642
           +K+P+NAFM++ +  R K+ ++     ++ I++ LG +W  L   E+  + + A+R R +
Sbjct: 371 IKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQL 430

Query: 643 HMKEHPDYKYRPRRKTKTPGLKNKK 717
           HM+ +PD+     R   T G K K+
Sbjct: 431 HMQLYPDWS---SRANATRGKKRKR 452



 Score = 23.4 bits (48), Expect = 2.5
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 770 SAAP--TAQQPRDVYQMTPNGYMP--NGYMMHDPXCVSTTSI 883
           SA P  T+  P D Y+ +P G +P   G   H P   S  +I
Sbjct: 100 SALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAI 141


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 782 TAQQPRDVYQMTPNGYM 832
           TA QP+DVY M   G M
Sbjct: 334 TADQPQDVYWMHFRGLM 350


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 512 GKWLRIIRKC 541
           G W+R +RKC
Sbjct: 135 GTWIRAVRKC 144


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 512 GKWLRIIRKC 541
           G W+R +RKC
Sbjct: 135 GTWIRAVRKC 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,766
Number of Sequences: 336
Number of extensions: 3384
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)