Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O14
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 37 0.022
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 36 0.039
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.16
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.16
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.21
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 33 0.36
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 1.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 1.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.6
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.6
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 4.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 7.8
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 7.8
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 7.8
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/64 (40%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -3
Query: 834 GGGGXXXGPX----GGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKXPXXGPF 667
GGGG GP GGF GG + RGGF G F G G FG P G
Sbjct: 33 GGGGFGGGPGQFGRGGFGGGPGSNYGPGRGGF-GGNGG------FGGNGGFGGGPSYGGR 85
Query: 666 XGFG 655
GFG
Sbjct: 86 GGFG 89
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = -3
Query: 834 GGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKXPXXGPFXG 661
GGGG G GGF GG+ RGGF R G G G F + G F G
Sbjct: 181 GGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGR---GRGDFKRSYDGGSFGG 235
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 864 GEKGXXVFFXGG-GGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXG-GGXFG 691
G++G GG GG G GGF GG F RGGF G F G GG FG
Sbjct: 162 GDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRGGFRGGDRG----GFRGGRGGDFG 217
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGK 688
G G F G G G GGF GG F RGG R F + GG G+
Sbjct: 178 GRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRGRGDFKRSYDGGSFGGQ 236
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 828 GGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXN--FFXGGGXFGKXPXXGPFXG 661
GG G GGF GG F ++GGF + G F N GG FG G F G
Sbjct: 166 GGFPGGHQGGFPGGNQGGFGGNQGGFGGNQGGFPFGNQGGNQGGFPFGNPGNQGGFGG 223
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = +1
Query: 682 GXFPKXPPPXKKIXKNXPPXXGGETPXGXXKTPGFSPXKTPXWAPXXPTPPXKENXXPFF 861
G +P PPP + PP TP + P P + W P P PP + P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMP--PTPGMTPRPP--PPPSSGMWPPPPPPPPGRTPGPPGM 313
Query: 862 P 864
P
Sbjct: 314 P 314
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/115 (26%), Positives = 33/115 (28%), Gaps = 2/115 (1%)
Frame = +2
Query: 467 PPXPGXRGFXFXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXX 646
PP P G + P P PP + P P G P P G P
Sbjct: 287 PPPPPSSGM-WPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPP-------- 335
Query: 647 QXGPKPXXGPXXGXFPXXPPPX--KKXKKXXPXRXGGKPPREXXKHRXFPPXKPP 805
P P G P PPP P +PP H PP PP
Sbjct: 336 ---PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +1
Query: 691 PKXPPPXKKIXKNXPPXXGGETPXGXXKTPGFSPXKTPXWAPXXPTPPXKENXXP 855
P PP + PP G P PG +P P P P PP P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPPPSRFGP 327
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 656 PKPXXGPXXGXFPXXPPPXKKXKKXXPXRXGGKPP 760
P+P P G +P PPP P G PP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = +1
Query: 682 GXFPKXPPPXKKIXKNXPPXXGGETPXGXXKTPGFSPXKTPXWAPXXPTPPXKENXXPFF 861
G +P PPP + PP TP + P P + W P P PP + P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMP--PTPGMTPRPP--PPPSSGMWPPPPPPPPGRTPGPPGM 323
Query: 862 P 864
P
Sbjct: 324 P 324
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/115 (26%), Positives = 33/115 (28%), Gaps = 2/115 (1%)
Frame = +2
Query: 467 PPXPGXRGFXFXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXX 646
PP P G + P P PP + P P G P P G P
Sbjct: 297 PPPPPSSGM-WPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPP-------- 345
Query: 647 QXGPKPXXGPXXGXFPXXPPPX--KKXKKXXPXRXGGKPPREXXKHRXFPPXKPP 805
P P G P PPP P +PP H PP PP
Sbjct: 346 ---PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +1
Query: 691 PKXPPPXKKIXKNXPPXXGGETPXGXXKTPGFSPXKTPXWAPXXPTPPXKENXXP 855
P PP + PP G P PG +P P P P PP P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPPPSRFGP 337
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 656 PKPXXGPXXGXFPXXPPPXKKXKKXXPXRXGGKPP 760
P+P P G +P PPP P G PP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = -3
Query: 834 GGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKXPXXGPFXGFG 655
GGGG GGF GG + GG G + + GGG G P G G+G
Sbjct: 176 GGGGDGGYGGGGFGGGGMGGYGGGMGG-GGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYG 234
Query: 654 P 652
P
Sbjct: 235 P 235
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -3
Query: 834 GGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKXPXXGPFXGFG 655
G GG G GGF GG + G F G + + GGG G G + G+G
Sbjct: 78 GYGGSGGGAFGGFNGGYGQGGYGGGGDF----GGGMGGGGYGGGGYGGGGDGGGGYGGYG 133
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/70 (32%), Positives = 26/70 (37%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKX 685
G+ G GG G GGF G F +GGF G F G G FG+
Sbjct: 62 GQSGFGGGSSQGGFGGFGQQGGFGGNSQGGFGGQQGGFSGNSPGG-FEGQQGGFGGFGQQ 120
Query: 684 PXXGPFXGFG 655
G GFG
Sbjct: 121 VGFGGQGGFG 130
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/81 (32%), Positives = 26/81 (32%)
Frame = +2
Query: 467 PPXPGXRGFXFXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXX 646
PP PG P P PP P P GG P GG P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP-PIT--GGPPPPPPPGG--LPPISGGPPPP---PPPP 765
Query: 647 QXGPKPXXGPXXGXFPXXPPP 709
P P P G F PPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 512 PXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXXQXGPKPXXGPXXGXF 691
P PP P GG P GG P GP P P G
Sbjct: 714 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 692 PXXPPPXKKXKKXXP 736
P PPP K P
Sbjct: 770 PPPPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/81 (32%), Positives = 26/81 (32%)
Frame = +2
Query: 467 PPXPGXRGFXFXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXX 646
PP PG P P PP P P GG P GG P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP-PIT--GGPPPPPPPGG--LPPISGGPPPP---PPPP 765
Query: 647 QXGPKPXXGPXXGXFPXXPPP 709
P P P G F PPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 512 PXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXXQXGPKPXXGPXXGXF 691
P PP P GG P GG P GP P P G
Sbjct: 714 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 692 PXXPPPXKKXKKXXP 736
P PPP K P
Sbjct: 770 PPPPPPPPGGFKGGP 784
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -3
Query: 834 GGGGXXXGPXGGFXGGKXRCF-XXSRGGFPPXRXGXIFXNFFXGGGXFG 691
GGGG G GGF GG F RGGF G F G G G
Sbjct: 340 GGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVGG 388
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/81 (32%), Positives = 26/81 (32%)
Frame = +2
Query: 467 PPXPGXRGFXFXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXX 646
PP PG P P PP P P GG P GG P G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLP-PIT--GGPPPPPPPGG--LPPISGGPPPP---PPPP 348
Query: 647 QXGPKPXXGPXXGXFPXXPPP 709
P P P G F PPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPP 369
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 512 PXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFFXKXXQXGPKPXXGPXXGXF 691
P PP P GG P GG P GP P P G
Sbjct: 297 PPPPGLPPIT----GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 692 PXXPPPXKKXKKXXP 736
P PPP K P
Sbjct: 353 PPPPPPPPGGFKGGP 367
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 605 FXGKXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPP 429
F GK P G P PPPK G P P P G PPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/119 (25%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Frame = +2
Query: 467 PPXPGXRGFX----FXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFF 634
PP P +G P P P P P G P G P G P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPP-- 292
Query: 635 XKXXQXGPKPXXGPXXGXFPXXPPPXKKXKKXXPXRXGGKPPREXXKHRXFPPXKPPXG 811
+ G P P G P P + P G PP + R P PP G
Sbjct: 293 ----RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -1
Query: 596 KXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPPXP 423
K P G P PPP G P P P G + PPP P
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -2
Query: 610 PXXXXXPXXPXGGXXXXXPPPXPGXXGFXGGXXXXXPKXKXPXPXGGGXFXXXKXXPXPP 431
P P P GG PPP G P P P GG PP
Sbjct: 275 PPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 430 PXRXKK 413
P R K+
Sbjct: 332 PPRQKR 337
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 605 FXGKXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPP 429
F GK P G P PPPK G P P P G PPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/119 (25%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Frame = +2
Query: 467 PPXPGXRGFX----FXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFF 634
PP P +G P P P P P G P G P G P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPP-- 313
Query: 635 XKXXQXGPKPXXGPXXGXFPXXPPPXKKXKKXXPXRXGGKPPREXXKHRXFPPXKPPXG 811
+ G P P G P P + P G PP + R P PP G
Sbjct: 314 ----RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -1
Query: 596 KXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPPXP 423
K P G P PPP G P P P G + PPP P
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -2
Query: 610 PXXXXXPXXPXGGXXXXXPPPXPGXXGFXGGXXXXXPKXKXPXPXGGGXFXXXKXXPXPP 431
P P P GG PPP G P P P GG PP
Sbjct: 296 PPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 430 PXRXKK 413
P R K+
Sbjct: 353 PPRQKR 358
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 605 FXGKXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPP 429
F GK P G P PPPK G P P P G PPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/119 (25%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Frame = +2
Query: 467 PPXPGXRGFX----FXXPXPXPPXKXPXPXXWGGGXXXXXPXGGXXXXPXXXGXPXKKFF 634
PP P +G P P P P P G P G P G P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPP-- 298
Query: 635 XKXXQXGPKPXXGPXXGXFPXXPPPXKKXKKXXPXRXGGKPPREXXKHRXFPPXKPPXG 811
+ G P P G P P + P G PP + R P PP G
Sbjct: 299 ----RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = -1
Query: 596 KXXXPXXGXXXPXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPPXP 423
K P G P PPP G P P P G + PPP P
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -2
Query: 610 PXXXXXPXXPXGGXXXXXPPPXPGXXGFXGGXXXXXPKXKXPXPXGGGXFXXXKXXPXPP 431
P P P GG PPP G P P P GG PP
Sbjct: 281 PPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 430 PXRXKK 413
P R K+
Sbjct: 338 PPRQKR 343
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 858 KGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPP 745
+G + G GG P GF GG+ ++GG+PP
Sbjct: 66 QGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPP 103
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 858 KGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPP 745
+G + G GG P GF GG+ ++GG+PP
Sbjct: 108 QGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPP 145
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 481 GKGXXFXGPXPXPPXKXPXPXXLGGGXGFXXPXXG 585
G G + PP P P +GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 481 GKGXXFXGPXPXPPXKXPXPXXLGGGXGFXXPXXG 585
G G + PP P P +GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Frame = +3
Query: 414 FFXRXGGGXGXFXXXXKXPP-PXGXGXXXXGXXXXXPPXXPXXPGFGGGXXXXXPPXGXX 590
F GGG G PP P G G PP P GGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPL--SLPSLGGGGGCCPPPAPAC 74
Query: 591 GFXXKXGXXPXKNFLXXGPKXXQNPKXXXXGGFSQXXPP 707
G G P G Q P+ GG++ P
Sbjct: 75 GGGCGGGVAP----APIGGGYAQAPQAPIGGGYAAPQAP 109
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/70 (32%), Positives = 26/70 (37%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKX 685
G G F G GG G G + GG GGF G + N GGG G+
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLI-NSMGGGGGGGQR 117
Query: 684 PXXGPFXGFG 655
G GFG
Sbjct: 118 QGGGG-GGFG 126
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -3
Query: 843 FFXGGGGXXXGPXGGFXGGKXRC---FXXSRGGFPPXRXGXIFXNFFXGGGXFGKXPXXG 673
F GGGG G GGF GG S GG G + + GGG G G
Sbjct: 51 FGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGG 110
Query: 672 PFXGFG 655
G G
Sbjct: 111 GNQGGG 116
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKX 685
G K F GG G GG GG F + G G + F GGG G
Sbjct: 36 GGKNGGTGFGGGNTGGSGFGGGNTGGSG--FGGGKAGGSGFGGGNTCGSGF-GGGSTGGS 92
Query: 684 PXXGPFXGFG 655
P G GFG
Sbjct: 93 PYGGASSGFG 102
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 691 PKXPPPXKKIXKNXPPXXGGETPXGXXKTPGFSPX---KTPXWAPXXPTPPXKENXXPFF 861
P PPP I + PP P K P P KTP + PTP KE F
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPP-TLKAPPPPPILGLKTPSKSLKTPTPRPKECPTSFL 128
Query: 862 P 864
P
Sbjct: 129 P 129
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = -1
Query: 563 PXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPPXP 423
P PPP G P P P G P PPP P
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = -1
Query: 563 PXPPPKXXGXGXXXGGXGXGPXXXXPXPXGXGXFXXXXKXPXPPPXP 423
P PPP G P P P G P PPP P
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +1
Query: 691 PKXPP-PXKKIXKNXPPXXGGETPXGXXKTPGFSPXKTPXWAPXXPTPPXK 840
P+ PP P K K P ETP K P K P P P K
Sbjct: 266 PEVPPTPIKNPTKKWKPPWEDETPVEEVKEPPVPEKKAPVLKKKDPAPAAK 316
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 432 GGXGXFXXXXKXPPPXGXGXXXXGXXXXXPPXXPXXPGFGGGXXXXXPP 578
GG G PPP G G PP P PG GG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPG----GGGGMYPPLIPTRPGPGGPPPNMAPP 829
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 432 GGXGXFXXXXKXPPPXGXGXXXXGXXXXXPPXXPXXPGFGGGXXXXXPP 578
GG G PPP G G PP P PG GG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPG----GGGGMYPPLIPTRPGPGGPPPNMAPP 829
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKX 685
G K F GG G GG GG F + G G + F GGG G
Sbjct: 36 GGKNGGTGFGGGNTGGSGFGGGNTGGSG--FGGGKTGGSGFGGGNTCGSGF-GGGSTGGS 92
Query: 684 PXXGPFXGFG 655
P G GFG
Sbjct: 93 PYGGASSGFG 102
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = -3
Query: 864 GEKGXXVFFXGGGGXXXGPXGGFXGGKXRCFXXSRGGFPPXRXGXIFXNFFXGGGXFGKX 685
G K F GG G GG GG F + G G + F GGG G
Sbjct: 36 GGKNGGTGFGGGNTGGSGFGGGNTGGSG--FGGGKTGGSGFGGGNTCGSGF-GGGSTGGS 92
Query: 684 PXXGPFXGFG 655
P G GFG
Sbjct: 93 PYGGASSGFG 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,089,162
Number of Sequences: 27780
Number of extensions: 202437
Number of successful extensions: 983
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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