Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O12
(932 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 31 1.3
12_02_0391 - 18533427-18533620,18534120-18534405,18534967-185350... 31 1.7
05_06_0211 + 26401495-26402224,26402932-26403014,26403295-264033... 31 1.7
04_04_0220 - 23708174-23708316,23708569-23708851 31 1.7
08_01_0105 + 756998-757225,757311-758597 30 2.3
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 29 4.0
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 29 4.0
02_01_0181 + 1237167-1237820,1238053-1238142,1238689-1238841,123... 29 4.0
04_04_1333 - 32721968-32721973,32722101-32722706,32722822-32722941 29 5.3
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 29 7.0
03_02_0009 + 4891545-4892147,4892757-4893308 29 7.0
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 28 9.2
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 28 9.2
04_04_0659 + 27008867-27008963,27011209-27011280,27011833-270119... 28 9.2
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +1
Query: 223 GNETARRQREPERHVKPRHYDEE*TASFSKESQGQSKNSQ*KESGQSS*RCDCEEGGVRR 402
G+ R++++ +RH K H D + + S+ +S +S ++ EE R+
Sbjct: 1138 GDRKHRKRKDRKRHRKHGHSDSDEAKRHKRRSKRRSSDSS-DDTDSDEYDSGSEEENRRK 1196
Query: 403 YNERL*QIVRAPGQG*SHASEESHC*DQNASSSKEHQITNKH 528
+ R + S AS+ S ++ SS K+H + H
Sbjct: 1197 KRSHRRKHRRHSSRSDSDASDYSSDDEERRSSKKDHSSSRSH 1238
>12_02_0391 -
18533427-18533620,18534120-18534405,18534967-18535028,
18535526-18535613
Length = 209
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 557 QLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKE-QNLSNGSVK-SARS 730
Q R + ++ V +HF K PP +V TRA G+ K E + + Q + N +K + R
Sbjct: 3 QFPRASPHSHGMVSRHFRKGPPPKV-TRAATGVEKRIEFEGNVGSLQVMHNKELKANTRK 61
Query: 731 DVSG---EPSLYMTA 766
+ G SLY TA
Sbjct: 62 KLQGVELSLSLYDTA 76
>05_06_0211 +
26401495-26402224,26402932-26403014,26403295-26403369,
26403442-26403513,26403684-26403764,26403946-26404043,
26404694-26404819,26404931-26404979,26405352-26405547,
26406475-26406491,26406786-26406839,26406845-26407036
Length = 590
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 653 ILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENI-SPSEVTKEEYK-QISEK 826
+LK E + ++ + G + + D+ EP L+++ E + S +E + Y+ QISEK
Sbjct: 399 VLKVGEEVKAIVIKSTAPGRIALSTKDLESEPGLFLSNKEKVFSEAEEMAQRYRDQISEK 458
Query: 827 LNKVNLDDT 853
LD +
Sbjct: 459 HQPAELDSS 467
>04_04_0220 - 23708174-23708316,23708569-23708851
Length = 141
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 491 LPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFE 670
LP + + G +S + Q++ ++ + ++K+F K PPK + R G +F
Sbjct: 31 LPPISRRSFPKGFIFGTSSSSYQVRHPTSSFLQEIEKNFIKLPPKVNSARTTVGTDCSFR 90
Query: 671 RKDK-LKEQNLS 703
R +K LK L+
Sbjct: 91 RGNKNLKPDKLT 102
>08_01_0105 + 756998-757225,757311-758597
Length = 504
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 704 YSDS-AL*VCLSFQNSSGCHSELLWPLAWV 618
YSDS A VC + + SG H ELLW +W+
Sbjct: 225 YSDSLASSVCPFYCSYSGYHDELLWGASWL 254
>07_03_1147 + 24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 629 VATRAQNGILKNFERKDKLKE-QNLSNGSVKSARSDVSGEPSLYMTALENISP 784
VA ++ + ERKD K+ + L +V + + D P+L+ T ENI P
Sbjct: 1067 VACHSEVTCAQQKERKDLTKKAKELLKNTVNNQQKDEVSSPALFQTFFENIFP 1119
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 386 RAAFGDITNAYNKSCAPQDKDK-AMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQL 562
R FGD+TN K AP + +K A +K V VE + P K G T T L
Sbjct: 10 RRPFGDLTNVLGKRPAPSNLEKSAGGIKIVRVEKAVEPR-KEFDETAKASGGATRNTLPL 68
>02_01_0181 +
1237167-1237820,1238053-1238142,1238689-1238841,
1238934-1239045,1239460-1239623,1239709-1240047
Length = 503
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 704 YSDSAL*VCLSFQNSSGCHSELLWPLAWVGL 612
YSDS V F S H ELLW +W+ L
Sbjct: 230 YSDSLSSVVCPFYCSHSYHDELLWAASWLHL 260
>04_04_1333 - 32721968-32721973,32722101-32722706,32722822-32722941
Length = 243
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 209 APTRLATKPLGVNENLNGMLSHGITTRSKQLAS--LKSHKDSLKIPNKRKADSPLKDV 376
A L K + +E L+G++SH I K L S +K+ + L P + +A S K+V
Sbjct: 180 AVATLLYKAVKASEELDGIISHLIKKFEKLLESHDVKTQSEKLPEPREAEAKSQAKEV 237
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 779 SPSEVTKEEYKQISEKLNKVNLDDTSRSW 865
SP EVT+EEY + L K DD SW
Sbjct: 379 SPKEVTEEEYTKFYHSLAKDFGDDKPLSW 407
>03_02_0009 + 4891545-4892147,4892757-4893308
Length = 384
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 698 LSNGSVKSARSDVSGEPSLYMTALENISPS 787
+ SV A D SG S+ MT LEN SPS
Sbjct: 84 MPGSSVFIASQDGSGSVSVLMTVLENTSPS 113
>10_08_0911 -
21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 398 GDITNAYNKSCAPQDKDKAMPVK-KVTVETKMLPAVKSIKSQTSTLN 535
GDI + +C P +KD ++ V +V+ + ++PA++ + S++N
Sbjct: 535 GDIVPDNSSACLPDEKDPSITVNHEVSFKEGVVPALEDDPEKMSSMN 581
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 275 RGLTCRSGSR*RRAVSLPI 219
RG+TC SG+R RR VSL +
Sbjct: 74 RGVTCSSGARHRRVVSLRV 92
>04_04_0659 +
27008867-27008963,27011209-27011280,27011833-27011907,
27012071-27012181,27012609-27012713,27012997-27013049,
27013549-27013674,27013742-27013861
Length = 252
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 449 KAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKD 616
K M VKK+ T LP KSQ + G T++ + ++ I AV+ TKD
Sbjct: 17 KNMEVKKIKSTTNNLPGADRTKSQ---VTGNTTEELRRKKTVEGTISAVES--TKD 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,441,886
Number of Sequences: 37544
Number of extensions: 454754
Number of successful extensions: 1152
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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