Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O12
(932 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015) 37 0.027
SB_16479| Best HMM Match : Cyclin_N (HMM E-Value=5.9e-23) 37 0.027
SB_52594| Best HMM Match : ShTK (HMM E-Value=1e-06) 35 0.11
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_32286| Best HMM Match : Extensin_2 (HMM E-Value=5.9) 34 0.19
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 33 0.25
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 33 0.44
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 32 0.76
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 32 0.76
SB_42756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) 32 0.76
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 31 1.3
SB_8345| Best HMM Match : SNF7 (HMM E-Value=1.6) 31 1.3
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_49493| Best HMM Match : CXC (HMM E-Value=9.4) 29 4.1
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 29 5.4
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 5.4
SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42) 29 5.4
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 7.1
SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 28 9.4
SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0) 28 9.4
SB_57572| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16) 28 9.4
>SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015)
Length = 529
Score = 36.7 bits (81), Expect = 0.027
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 344 KRKADSPLKDV--TAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKS 517
KR A SP + T KR+AFGDITNA+ + A + K K+ KK T+ V+ K+
Sbjct: 419 KRLAASPQEGEAPTRKRSAFGDITNAFRQQQAGKSK-KSSAQKKPETRTESQNGVQRRKT 477
Query: 518 QTS 526
++S
Sbjct: 478 RSS 480
>SB_16479| Best HMM Match : Cyclin_N (HMM E-Value=5.9e-23)
Length = 392
Score = 36.7 bits (81), Expect = 0.027
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 344 KRKADSPLKDV--TAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKS 517
KR A SP + T KR+AFGDITNA+ + A + K K+ KK T+ V+ K+
Sbjct: 23 KRLAASPQEGEAPTRKRSAFGDITNAFRQQQAGKSK-KSSAQKKPETRTESQNGVQRRKT 81
Query: 518 QTS 526
++S
Sbjct: 82 RSS 84
>SB_52594| Best HMM Match : ShTK (HMM E-Value=1e-06)
Length = 324
Score = 34.7 bits (76), Expect = 0.11
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Frame = +2
Query: 401 DITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTK--QLQRVA 574
++ A+N S + + DK + + +E K+ + + + + K K Q+ +
Sbjct: 28 EVEKAFNSSMSGKS-DKVLKALESDIERKVDGLADQVITPKDSASAKNDSAKDPQIDDGS 86
Query: 575 NNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSL 754
N + F D + V T + + ++ + + +K K N VKS + GEP
Sbjct: 87 ENVVTQTVADFA-DSSEAVGTESADDVIVHVDSGNK-KSMGSRNTGVKSRVN--KGEPKY 142
Query: 755 YMTALENISPSEVTKEEYKQISEKLNKVN 841
+ E SEV K + KQ+ E L ++
Sbjct: 143 QDKSNEASRSSEVHKGDPKQMDEHLEVIS 171
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 34.7 bits (76), Expect = 0.11
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Frame = +2
Query: 419 NKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQ----TSTLNGKTSKTKQLQRVANNAI 586
+K+ PQD+DK K + K + K+ K + T+ + +KT+QLQ A A
Sbjct: 500 SKTSKPQDQDKQDKRDKREKKDKQGASRKTSKPEDQDKTAARPSRKTKTRQLQDQAARAR 559
Query: 587 DAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTA 766
A K +D KQ A + Q + KL++QN + AR + SL +
Sbjct: 560 QASSKCKPQDKDKQAARQRQAS-----RKTSKLQDQNNQAARPRRAR-----QASLKTSK 609
Query: 767 LENISPSEVTKEEYKQISEKLNKVNLDDT 853
L++ + + K++ K S + + D+T
Sbjct: 610 LQDQNKQD--KQDAKPASRRTKPQDQDNT 636
>SB_32286| Best HMM Match : Extensin_2 (HMM E-Value=5.9)
Length = 535
Score = 33.9 bits (74), Expect = 0.19
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 599 KHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENI 778
K TK P + + +K+ E KD++ QN++NG K R +VSG LY L +I
Sbjct: 375 KKGTKAPEEAIYDDVAISPIKHTETKDEILHQNVANGGGKFPR-NVSGTIHLYSLNL-SI 432
Query: 779 SPSEVT 796
PS V+
Sbjct: 433 RPSYVS 438
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 33.5 bits (73), Expect = 0.25
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +2
Query: 419 NKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQ----TSTLNGKTSKTKQLQRVANNAI 586
+K+ PQD+DK K + K + K+ K + T+ + +KT+QLQ A
Sbjct: 732 SKTSKPQDQDKQDKRDKREKKDKQGASRKTSKPEDQDKTAARPSRKTKTRQLQDQAARPR 791
Query: 587 DAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTA 766
A K +D KQ A + Q + + KL++QN + AR + SL +
Sbjct: 792 QASSKTKLQDKDKQAARQRQASL-----KTSKLQDQNNQAARPRRAR-----QASLKTSK 841
Query: 767 LENISPSEVTKEEYKQISEKLNKVNLDDTSR 859
L++ + + ++ S K K D TS+
Sbjct: 842 LQDQNKQDKQDQQAAGPSRK-TKTTQDKTSK 871
Score = 30.7 bits (66), Expect = 1.8
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Frame = +2
Query: 176 TARAVKSRSVMAPTRLATKPLGVNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKA 355
T+R +K+ + + A +P+ + ++ + S + K ++ K
Sbjct: 448 TSRRIKTSKLQDQDKQAARPIEASHKTKRSKPQDQDKQAARPRQASSKTKTSKPQDQDKQ 507
Query: 356 DSPLKDVTAKRAAFGDITNAYNKSCAPQDKDK-AMPVKKVTVETKMLPAVKSIKSQT--- 523
D +D A R A A +K+ PQD+DK A ++ + +TK K T
Sbjct: 508 DQHKQDKQASRQATRQARQASHKTNKPQDQDKQAARPRQASRKTKTSKPQDQEKQATRPR 567
Query: 524 -STLNGKTSKTKQLQ 565
++ KTSK + Q
Sbjct: 568 QASRKTKTSKPQDKQ 582
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 32.7 bits (71), Expect = 0.44
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Frame = +2
Query: 290 SKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKK 469
SK S K+ K S K + + ++ + A + K+ PQ+KDK K+
Sbjct: 241 SKTKTSRKT-KTSRKTKTSKPQEKNKQEQDKQAARQASRKTSKTKTSKPQEKDKQDEDKQ 299
Query: 470 VTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT---KDPPKQVATR 640
+ ++ S K +TST KTSK ++ + A A +K T +D KQ A
Sbjct: 300 AARKRQVRTRQASRKKKTST--NKTSKPQEKDKKAARPRQASRKTKTSKPQDQDKQAARP 357
Query: 641 AQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALE-NISPSEVTKEEYKQ 814
Q ++ +L++ ++ K+++ V + + + + S S+ +K + KQ
Sbjct: 358 RQESRKPQDKQAARLRQ---ASRKTKTSKPQVQDKQAARQASCKTKTSKSKTSKPKEKQ 413
Score = 31.5 bits (68), Expect = 1.0
Identities = 39/181 (21%), Positives = 69/181 (38%)
Frame = +2
Query: 347 RKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTS 526
RK + T R A + NK PQ+KDK ++ + + + S K++ S
Sbjct: 95 RKTKTSKPQATRPRQASSKKKTSKNKPGKPQEKDKQEQARQAARKRQARTSQASRKNKPS 154
Query: 527 TLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSN 706
K SK K + + DA + + P++ + + + K + +DK E+ S
Sbjct: 155 --KNKPSKNKTTKPQDQDKQDARPR---QARPREASRKTKTSKTKRSKPQDKQAERQASR 209
Query: 707 GSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTSRSWMXNRDPH 886
+ K + + S + P E K+ +Q S K TSR ++
Sbjct: 210 KTSKPKDKQAARQAS-----RKTSKPQE--KQAARQASSKTKTSRKTKTSRKTKTSKPQE 262
Query: 887 K 889
K
Sbjct: 263 K 263
Score = 30.7 bits (66), Expect = 1.8
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Frame = +2
Query: 284 TRSKQLASLK-SHKDSLKIPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMP 460
TR +Q +S K + K+ P ++ + KR A + A K+ ++K
Sbjct: 105 TRPRQASSKKKTSKNKPGKPQEKDKQEQARQAARKRQA--RTSQASRKNKPSKNKPSKNK 162
Query: 461 VKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATR 640
K + K + + + ++ KTSKTK+ + A + +K KQ A +
Sbjct: 163 TTKPQDQDKQDARPRQARPREASRKTKTSKTKRSKPQDKQAERQASRKTSKPKDKQAARQ 222
Query: 641 AQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQIS 820
A K + ++K + S+ + S ++ S + +N E K+ +Q S
Sbjct: 223 ASR---KTSKPQEKQAARQASSKTKTSRKTKTSRKTKTSKPQEKN--KQEQDKQAARQAS 277
Query: 821 EKLNK 835
K +K
Sbjct: 278 RKTSK 282
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 31.9 bits (69), Expect = 0.76
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +2
Query: 338 PNKRKADSPLK-DVTAKRAAFGDITNAY---NKSCAPQDKDKAMPVKKVTVETKMLPAVK 505
P +K++ P+K D + + G + KS P KD+A P KK + + AVK
Sbjct: 261 PKAKKSEGPMKKDEPKPKKSEGPMKKDEPKPKKSEGPMKKDEAKPAKKESSKHIEKNAVK 320
Query: 506 SIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHF 607
+ N K + T Q AID ++ +
Sbjct: 321 KSILKAPKRNAKKAATDAEQTTTKKAIDKKRRRY 354
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 31.9 bits (69), Expect = 0.76
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Frame = +2
Query: 347 RKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDK--AMP--VKKVTVETKMLPAVK-SI 511
RK+ + K+AA ++ NK+ PQD+DK A P ++T +K VK +
Sbjct: 280 RKSKTSKPQDQDKQAAKPRQASSKNKTSKPQDQDKQAARPSQASRMTKTSKPQDQVKQAA 339
Query: 512 KSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT---KDPPKQVA-TRAQNGILKNFERKD 679
+S+ ++ KTSK + + A A +K T ++ KQ A R + K + +D
Sbjct: 340 RSRQASRKTKTSKLQDQDKQAAKPRQASRKTKTSKLQNQNKQAAIPRQASRKTKTSKPQD 399
Query: 680 KLKEQNLSNGSVKSAR-SDVSGEPSLYMTALENISPSEVTKEEYKQ 814
+ K++ K AR S + T S + +K++ KQ
Sbjct: 400 QDKQEQDKQDQEKQARPRQASRKSKARPTQASRKSKASKSKDQGKQ 445
>SB_42756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 31.9 bits (69), Expect = 0.76
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 449 KAMPVKKVTVETKMLPAVKSIKSQ--TSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPP 622
K +P K T + P K++ TL+ +++ TK+ + N I + F+K+
Sbjct: 225 KNIPANKETFDQAAPPYQKALDESGYNYTLHYESNTTKKRKNRQRNNIIWYKPPFSKNTS 284
Query: 623 KQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKE 802
+ R + I K+F + KL+ + ++ ++K + S +S + + + I S +T E
Sbjct: 285 TNIGHRFLSLIDKHFSKDHKLR-KIINRNTIKISYSCMSNTKQIIDSHNKRIIASSITTE 343
Query: 803 E 805
+
Sbjct: 344 D 344
>SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)
Length = 495
Score = 31.9 bits (69), Expect = 0.76
Identities = 31/157 (19%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Frame = +2
Query: 242 VNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFGDITNAYN 421
V + N + + T ++K +++ +K+ +I R+ K + K+A +
Sbjct: 115 VTTDRNNLRTSMKTLQAKYEQAMQKNKE-YEIAIDRQGSDDEKKLEQKQADNKMLLQKIQ 173
Query: 422 KSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANN-AIDAVQ 598
K A +++ ++ K+ ++K+ + +K++ TL + K K+ ++ ++ A++ +
Sbjct: 174 KLQAEREQHQSTIEKQDQEKSKLTQTCRDLKAKLDTLRAELKKLKEKRKTPDDKAMEELD 233
Query: 599 KHFTK--DPPKQVATRAQNGI--LKNFERKDKLKEQN 697
K + +Q + ++ I LK+F+ + K+KEQN
Sbjct: 234 MENQKLQENLEQFSVEREDMIKVLKSFKEQLKVKEQN 270
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 31.9 bits (69), Expect = 0.76
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 404 ITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTST---LNGKTSKTKQLQRVA 574
+T+A+++ KD V E + +++ ST K S K L +
Sbjct: 903 MTSAFSQISGNDTKDSTKSVMAEAGENLLHCIGNVLETSPSTPKCQQNKMSAKKALAMIE 962
Query: 575 NNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDV 736
N +++ T+D P + T++ +L + +D K +++ N V +SDV
Sbjct: 963 NVGDSLLKRQTTEDEPILIQTQSIQMVLDRKKPEDLSKPKSVGNSKVALPKSDV 1016
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 31.1 bits (67), Expect = 1.3
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 437 QDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVA--NNAIDAVQKHFT 610
++K+K VKK + K + S KS+ K K ++ + VA + ++V+
Sbjct: 480 RNKEKKKEVKKKKGKEKSTTSGTSKKSEAEIQEKKEIKVEEAKPVAKSDKPQESVKDIER 539
Query: 611 KDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPS- 787
+ +++AT +N ++KL E + K + + E + A+EN+ +
Sbjct: 540 SEVYQKLATDYKNTEKALLIEQEKLSEMEKELENSKDEKVKIEQEKADLDIAIENLKRNQ 599
Query: 788 EVTKEEYKQISEKLNKVN 841
E+ EE K E L + N
Sbjct: 600 EIELEELKDNIEDLEREN 617
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +2
Query: 656 LKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNK 835
LKNF + L++ LS+ + S +++G P L T L ++S +++ E + EKL+
Sbjct: 53 LKNFPKLPNLRKLELSDNRISSGLQNLTGSPKL--THL-SLSGNKIKDLETLEPLEKLSN 109
Query: 836 VNLDDTSRSWMXNRDPHK 889
+ D + N D +K
Sbjct: 110 LKSLDLFNCEVTNVDDYK 127
>SB_8345| Best HMM Match : SNF7 (HMM E-Value=1.6)
Length = 216
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +2
Query: 365 LKDVTAKRAAFGDITNAY-----NKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTST 529
+ D+T+ DIT+ N S P+ D ++++T T L + + TST
Sbjct: 141 MTDITSTLQRMTDITSTLQRMTDNTSTLPRMTDNTSTLQRMTDNTSTL---QRMNDNTST 197
Query: 530 LNGKTSKTKQLQRVANN 580
L T T LQR+ +N
Sbjct: 198 LQRMTDNTSTLQRMTDN 214
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 30.3 bits (65), Expect = 2.3
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 443 KDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVA-NNAIDAVQKHFTKDP 619
KD+ + K+ +E +L +SQ S L + +TK+ A +A++ +QK+ +
Sbjct: 289 KDEEILQKEAQMEDDLLLMRNEYESQVSALRAEIERTKESGNAALKDAMEELQKYKAEVT 348
Query: 620 PKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSL-YMTALENISPSEVT 796
K + +K E L+ + + + +A+S SG+ S+ +LEN++ +
Sbjct: 349 EKGDLEEIRAQHMKEIEEMQVLQCKEIEDIKA-TAQSRDSGDGSVARKESLENVAQLKQQ 407
Query: 797 KEEYK 811
+ Y+
Sbjct: 408 LQAYE 412
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 668 ERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLD 847
+R + + L NG V+ RSDVSG E I +Y++++ + K+ +D
Sbjct: 1499 KRFNHIARATLLNGVVRMTRSDVSGYKKWEGNQSEQI--------KYRRVARAVKKIGVD 1550
Query: 848 DTSRSWMXNRDPHKL 892
D S+ + P K+
Sbjct: 1551 DDVISFSNSTTPDKV 1565
>SB_49493| Best HMM Match : CXC (HMM E-Value=9.4)
Length = 201
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = +2
Query: 542 TSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKS 721
TSK K QR NN I HF+K+ + R + I K+F + KL+ + + ++K
Sbjct: 62 TSKRKNRQR--NNII-WYNPHFSKNTSTNIGHRFLSLIDKHFPKDHKLR-KIFNRNTIKI 117
Query: 722 ARSDVSGEPSLYMTALENISPSEVTKEE 805
+ S +S + + + I S +T E+
Sbjct: 118 SYSCMSNTKQIIDSHNKRIIASSITTED 145
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 248 ENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFG 400
+ +G+L +GI T K + + K+P KRK + V + + A+G
Sbjct: 1032 DTFSGLLHYGIFTLEKSVKEKFRKLANTKLPRKRKVGDTSETVASDKDAYG 1082
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 29.1 bits (62), Expect = 5.4
Identities = 30/105 (28%), Positives = 46/105 (43%)
Frame = +2
Query: 530 LNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNG 709
L GK S+ ++ V + D P A R + +LK LK + +
Sbjct: 386 LTGKASRLEKSPEVQEATSSEESTLASVDVPNS-ANRKMSPVLKPLVFNLPLKNR-IQGS 443
Query: 710 SVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNL 844
S+KS+ + +S PS T L PSE T EEY + ++ VN+
Sbjct: 444 SIKSSDTILS-PPSKEATNL----PSEDTYEEYLAMVNEMESVNI 483
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 512 KSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKE 691
+ + S N + K + + + N +DA+++ +TK QV T ER +L E
Sbjct: 598 REELSAKNQQLDKLENVNKALENRVDALKQEYTK---TQVTTEVSTKQKDALER--ELSE 652
Query: 692 QNLSNGSVKSARSDVSG 742
N N ++ A +++G
Sbjct: 653 ANGKNRELEEACENLAG 669
>SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42)
Length = 1451
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 503 KSIKSQTSTLNGKT-SKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKD 679
K +K + STLNG T ++ ++ +V+ + + T +++ + G + N +RKD
Sbjct: 735 KPVKLRVSTLNGNTNNRVQEHDQVSEEGTPGIVAYSTSTEEQEIEFQ-DTGAIAN-KRKD 792
Query: 680 KLKEQNL 700
L+ NL
Sbjct: 793 DLEMDNL 799
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 503 KSIKSQTSTLNGKT-SKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKD 679
K +K + STLNG T ++ ++ +V+ + + T +++ + +G + N +RKD
Sbjct: 218 KPVKLRVSTLNGNTNNRVQEHDQVSEEGTPGIVAYSTSAEEQEIEFQ-DSGAIAN-KRKD 275
Query: 680 KLKEQNLSNGS 712
L+ N G+
Sbjct: 276 NLEMDNSQIGA 286
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 28.7 bits (61), Expect = 7.1
Identities = 30/193 (15%), Positives = 77/193 (39%), Gaps = 8/193 (4%)
Frame = +2
Query: 308 LKSHKDSLKIPNKRKAD--SPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVE 481
++ +++ ++ K D LKD ++ A N + +K +++
Sbjct: 1101 IREGEEAREVARKENTDLKRQLKDEEREKDAVSHTANELRGKVKKSEAEKTNLRRQLDEA 1160
Query: 482 TKMLPAVKS----IKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQN 649
++ + +++ ++ + L G + ++ + A + + + + ++ +
Sbjct: 1161 SQKIASLEETRNGLQKEAGDLRGSLREVEKARLEARRELQQLHNQVKMLDGECLKSKKEI 1220
Query: 650 GILKNFERKDK--LKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISE 823
LK+ KD+ L E N ++K +D G+ + N+S EE ++ E
Sbjct: 1221 SDLKDQLAKDEHLLNEVRRDNHNLKQRLADSDGQKEAAKREIANLSRKMAETEEDNRVRE 1280
Query: 824 KLNKVNLDDTSRS 862
K LD++ R+
Sbjct: 1281 KDLTTALDESRRA 1293
>SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/96 (22%), Positives = 40/96 (41%)
Frame = +2
Query: 542 TSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKS 721
T K ++A + Q ++ KQ+A A N I E K +L++ + +
Sbjct: 222 TESAKNASKMATKSKQKGQDFIKRN--KQLAADAANVIPMTEEEKSRLEQLLRDDNTDSL 279
Query: 722 ARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKL 829
+ +L +T+ P EV+ + +I EKL
Sbjct: 280 VNENPFDSSTLSLTSGVGFRPDEVSAQALAEIEEKL 315
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 461 VKKVTVETKMLPAVKSIKSQTS---TLNGKTSKTKQLQRVANNAIDAVQKHFT 610
VKKVT +T M+P +K + TL + + QL+R VQ+HFT
Sbjct: 99 VKKVTKKTTMVPEKVMVKRKVKKMVTLKEPSGPSSQLKRREKRR--GVQRHFT 149
>SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 169
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 253 PERHVKPRHYDEE*TASFSKESQGQSKN 336
P R VKPRH +E S + E Q +S N
Sbjct: 87 PPRPVKPRHLQQEEVLSSNVEVQNESNN 114
>SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1736
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 924 HPISSQVRHQXSL*GSLXFIQDLDVSSKFTLFSFS 820
HP+ VR+ +L GS+ F+ D + +KFT+ +S
Sbjct: 847 HPVWGSVRNIQTLAGSMVFVYD-QIRAKFTVDDYS 880
>SB_57572| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16)
Length = 603
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 494 PAVKSIKSQTSTLNGKTSKTKQLQRVANN 580
P++K ++ + +TL+ T KT++L + NN
Sbjct: 188 PSIKLVQDKNTTLSDLTQKTRKLIKTGNN 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,488,251
Number of Sequences: 59808
Number of extensions: 542089
Number of successful extensions: 1654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2717121828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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