Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O12
(932 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 33 1.1
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 33 1.1
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 33 1.1
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 33 1.1
BX248518-6|CAM26016.1| 807|Homo sapiens ATP-binding cassette su... 33 1.5
BX119957-2|CAM25906.1| 807|Homo sapiens ATP-binding cassette su... 33 1.5
BX000357-8|CAI18562.1| 807|Homo sapiens ATP-binding cassette, s... 33 1.5
BA000025-75|BAB63325.1| 807|Homo sapiens TNFalpha-inducible ATP... 33 1.5
AL662825-6|CAI17836.1| 807|Homo sapiens ATP-binding cassette, s... 33 1.5
AL662800-7|CAI18159.1| 807|Homo sapiens ATP-binding cassette, s... 33 1.5
AF027302-1|AAC70891.1| 807|Homo sapiens TNF-alpha stimulated AB... 33 1.5
AB202093-1|BAE78612.1| 807|Homo sapiens ATP-binding cassette, s... 33 1.5
AB103602-1|BAF31263.1| 807|Homo sapiens ABC50 protein protein. 33 1.5
AB088096-1|BAC54928.1| 807|Homo sapiens ATP-binding cassette, s... 33 1.5
AB053469-1|BAC54108.1| 720|Homo sapiens ELKS gamma protein. 33 1.5
U08854-1|AAC50077.1| 530|Homo sapiens UDP glucuronosyltransfera... 31 6.0
BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 31 6.0
AF548389-1|AAN40695.1| 530|Homo sapiens UDP-glucuronosyltransfe... 31 6.0
AF180322-1|AAD55093.1| 530|Homo sapiens UDP-glucuronosyltransfe... 31 6.0
D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein. 31 7.9
BX641011-1|CAE46010.1| 262|Homo sapiens hypothetical protein pr... 31 7.9
BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 31 7.9
BC146792-1|AAI46793.1| 2624|Homo sapiens B double prime 1, subun... 31 7.9
AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome ass... 31 7.9
AF197927-1|AAF18981.1| 1163|Homo sapiens AF5q31 protein protein. 31 7.9
AB209547-1|BAD92784.1| 907|Homo sapiens ALL1 fused gene from 5q... 31 7.9
AB051476-1|BAB21780.3| 2627|Homo sapiens KIAA1689 protein protein. 31 7.9
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 33.5 bits (73), Expect = 1.1
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 7/172 (4%)
Frame = +2
Query: 323 DSLKIPNKRKADSPLKDVTAKRAAFGDI------TNAYNKSCAPQDKDKAMPVKKVTVET 484
+ K P K +A SP K + ++A D+ T A ++ +P DK V E
Sbjct: 734 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEV 793
Query: 485 KMLPAVKS-IKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILK 661
K KS +K+ + K ++++ + Q+ K+PPK+ K
Sbjct: 794 KSPEKAKSPLKADAKAPEKEIPKKEEVKSPVKEE-EKPQEVKVKEPPKKAEEEKAPATPK 852
Query: 662 NFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQI 817
E+KD KE+ + K + + EP++ + + E+ K++
Sbjct: 853 TEEKKDSKKEEAPKKEAPK-PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKV 903
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 33.5 bits (73), Expect = 1.1
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Frame = +2
Query: 323 DSLKIPNKRKADSPLKDVTAKRAAFGDI------TNAYNKSCAPQDKDKAMPVKKVTVET 484
+ K P K +A SP K + ++A D+ T A ++ +P DK V E
Sbjct: 740 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEV 799
Query: 485 KMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKN 664
K KS + + K K+ + + Q+ K+PPK+ K
Sbjct: 800 KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 859
Query: 665 FERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQI 817
E+KD KE+ + K + + EP++ + + E+ K++
Sbjct: 860 EEKKDSKKEEAPKKEAPK-PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKV 909
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 33.5 bits (73), Expect = 1.1
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Frame = +2
Query: 323 DSLKIPNKRKADSPLKDVTAKRAAFGDI------TNAYNKSCAPQDKDKAMPVKKVTVET 484
+ K P K +A SP K + ++A D+ T A ++ +P DK V E
Sbjct: 740 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEV 799
Query: 485 KMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKN 664
K KS + + K K+ + + Q+ K+PPK+ K
Sbjct: 800 KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 859
Query: 665 FERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQI 817
E+KD KE+ + K + + EP++ + + E+ K++
Sbjct: 860 EEKKDSKKEEAPKKEAPK-PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKV 909
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 33.5 bits (73), Expect = 1.1
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 6/171 (3%)
Frame = +2
Query: 323 DSLKIPNKRKADSPLKDVTAKRAAFGDI------TNAYNKSCAPQDKDKAMPVKKVTVET 484
+ K P K +A SP K + ++A D+ T A ++ +P DK V E
Sbjct: 748 EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEV 807
Query: 485 KMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKN 664
K KS + + K K+ + + Q+ K+PPK+ K
Sbjct: 808 KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 867
Query: 665 FERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQI 817
E+KD KE+ + K + + EP++ + + E+ K++
Sbjct: 868 EEKKDSKKEEAPKKEAPK-PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKV 917
>BX248518-6|CAM26016.1| 807|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>BX119957-2|CAM25906.1| 807|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>BX000357-8|CAI18562.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>BA000025-75|BAB63325.1| 807|Homo sapiens TNFalpha-inducible
ATP-binding protein protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AL662825-6|CAI17836.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AL662800-7|CAI18159.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AF027302-1|AAC70891.1| 807|Homo sapiens TNF-alpha stimulated ABC
protein protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AB202093-1|BAE78612.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AB103602-1|BAF31263.1| 807|Homo sapiens ABC50 protein protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AB088096-1|BAC54928.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 476 VETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFT-KDPPKQVATRAQNG 652
V + PA+K K + GK + + N D ++ K+PPKQ +A+
Sbjct: 165 VSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDKEEEIIKEKEPPKQGKEKAKKA 224
Query: 653 ILKNFERK-DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+ER+ LK N + +++++S ++ LEN S ++ K
Sbjct: 225 EQMEYERQVASLKAANAAENDFSVSQAEMSSRQAM----LENASDIKLEK 270
>AB053469-1|BAC54108.1| 720|Homo sapiens ELKS gamma protein.
Length = 720
Score = 33.1 bits (72), Expect = 1.5
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Frame = +2
Query: 347 RKADSPLKDVTAKRAAFGDITNAYNKSCAPQ-DKDKAM---PVKKVTV---------ETK 487
R+ D KDV K + N+ +P+ K++A+ K+T+ E
Sbjct: 163 RENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEEN 222
Query: 488 MLPAVKSIKSQTSTLNGKTSKTKQLQRVANN-AIDAVQKHFTKDPPKQVATRAQNGILKN 664
+ A++ + T+ K KTKQ+Q +A A + H KD V R N + K
Sbjct: 223 QVDALRLRLEEKETMLNK--KTKQIQDMAEEKGTQAGEIHDLKDM-LDVKERKVNVLQKK 279
Query: 665 FER-----KDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQ 814
E +DK K+ + VKS ++D + + T E ++ E T E K+
Sbjct: 280 IENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKE 334
>U08854-1|AAC50077.1| 530|Homo sapiens UDP glucuronosyltransferase
precursor protein.
Length = 530
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 664 ILQDAILSSCGHLLGWVFGEMFLYCINSIIGYPLELFG 551
IL DA L+ CG LL +F FLY + +GY E G
Sbjct: 149 ILADA-LNPCGELLAELFNIPFLYSLRFSVGYTFEKNG 185
>BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 31.1 bits (67), Expect = 6.0
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Frame = +2
Query: 212 PTRLATKPLGVNENLNGM-------LSHGITTRS------KQLASLKSHKDSLKIPNKRK 352
P KP+G + +GM L+HGI ++ K + K H +SL IP +
Sbjct: 1112 PVTSLLKPVGEKDTWSGMRTTGQLRLAHGIRLKANKDSLYKPILRQKKHFNSLHIPKALQ 1171
Query: 353 ADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTL 532
P K+ +A G + P+D+ + +++ E K+L + ++ ST+
Sbjct: 1172 KALPFKNKPKTQAKAGKV---------PKDRRRPAVIRE-PHERKILALLDAL----STV 1217
Query: 533 NGKTSKTKQLQRVANNAIDAVQKHF-TKDPPKQVATRAQNGILKNFERKDKLKEQNLSNG 709
+ + K + QR +N ++HF K ++ + Q + K R KE+
Sbjct: 1218 HSQKMKKAKEQRHLHN-----KEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKS 1272
Query: 710 SVKSARSDV 736
S+K A +
Sbjct: 1273 SLKGAEGQL 1281
>AF548389-1|AAN40695.1| 530|Homo sapiens
UDP-glucuronosyltransferase protein.
Length = 530
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 664 ILQDAILSSCGHLLGWVFGEMFLYCINSIIGYPLELFG 551
IL DA L+ CG LL +F FLY + +GY E G
Sbjct: 149 ILADA-LNPCGELLAELFNIPFLYSLRFSVGYTFEKNG 185
>AF180322-1|AAD55093.1| 530|Homo sapiens
UDP-glucuronosyltransferase 2B15 protein.
Length = 530
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 664 ILQDAILSSCGHLLGWVFGEMFLYCINSIIGYPLELFG 551
IL DA L+ CG LL +F FLY + +GY E G
Sbjct: 149 ILADA-LNPCGELLAELFNIPFLYSLRFSVGYTFEKNG 185
>D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein.
Length = 1285
Score = 30.7 bits (66), Expect = 7.9
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Frame = +2
Query: 212 PTRLATKPLGVNENLNGM-------LSHGITTRS------KQLASLKSHKDSLKIPNKRK 352
P KP+G + +GM L+HG+ ++ K + K H +SL IP +
Sbjct: 1115 PVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQ 1174
Query: 353 ADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTL 532
P K+ +A G + P+D+ + +++ E K+L + ++ ST+
Sbjct: 1175 KALPFKNKPKTQAKAGKV---------PKDRRRPAVIRE-PHERKILALLDAL----STV 1220
Query: 533 NGKTSKTKQLQRVANNAIDAVQKHF-TKDPPKQVATRAQNGILKNFERKDKLKEQNLSNG 709
+ + K + QR +N ++HF K ++ + Q + K R KE+
Sbjct: 1221 HSQKMKKAKEQRHLHN-----KEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKS 1275
Query: 710 SVKSARSDV 736
S+K A +
Sbjct: 1276 SLKGAEGQL 1284
>BX641011-1|CAE46010.1| 262|Homo sapiens hypothetical protein
protein.
Length = 262
Score = 30.7 bits (66), Expect = 7.9
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 434 PQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTK 613
PQ M V T P + + S+TS+ S+ + + + ++ +
Sbjct: 139 PQLPQDEMIVSDKEERTDAAPKSQQMDSRTSSSKASLSRPGR-RPLGFLSLICSKNSLES 197
Query: 614 DPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSAR--SDVSGEPSLYMTALENISPS 787
D P QV ++ + L RK KLK N N S + R SD+ PS+ T ENIS S
Sbjct: 198 DEPMQVHSKKRLKPLIPGLRK-KLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSS 256
>BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.7 bits (66), Expect = 7.9
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Frame = +2
Query: 212 PTRLATKPLGVNENLNGM-------LSHGITTRS------KQLASLKSHKDSLKIPNKRK 352
P KP+G + +GM L+HG+ ++ K + K H +SL IP +
Sbjct: 1112 PVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQ 1171
Query: 353 ADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTL 532
P K+ +A G + P+D+ + +++ E K+L + ++ ST+
Sbjct: 1172 KALPFKNKPKTQAKAGKV---------PKDRRRPAVIRE-PHERKILALLDAL----STV 1217
Query: 533 NGKTSKTKQLQRVANNAIDAVQKHF-TKDPPKQVATRAQNGILKNFERKDKLKEQNLSNG 709
+ + K + QR +N ++HF K ++ + Q + K R KE+
Sbjct: 1218 HSQKMKKAKEQRHLHN-----KEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKS 1272
Query: 710 SVKSARSDV 736
S+K A +
Sbjct: 1273 SLKGAEGQL 1281
>BC146792-1|AAI46793.1| 2624|Homo sapiens B double prime 1, subunit of
RNA polymerase III transcription initiation factor
protein.
Length = 2624
Score = 30.7 bits (66), Expect = 7.9
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 434 PQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTK 613
PQ M V T P + + S+TS+ S+ + + + ++ +
Sbjct: 2461 PQLPQDEMIVSDKEERTDAAPKSQQMDSRTSSSKASLSRPGR-RPLGFLSLICSKNSLES 2519
Query: 614 DPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSAR--SDVSGEPSLYMTALENISPS 787
D P QV ++ + L RK KLK N N S + R SD+ PS+ T ENIS S
Sbjct: 2520 DEPMQVHSKKRLKPLIPGLRK-KLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSS 2578
>AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome assembly
protein (yeast) protein.
Length = 1282
Score = 30.7 bits (66), Expect = 7.9
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Frame = +2
Query: 212 PTRLATKPLGVNENLNGM-------LSHGITTRS------KQLASLKSHKDSLKIPNKRK 352
P KP+G + +GM L+HG+ ++ K + K H +SL IP +
Sbjct: 1112 PVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQ 1171
Query: 353 ADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTL 532
P K+ +A G + P+D+ + +++ E K+L + ++ ST+
Sbjct: 1172 KALPFKNKPKTQAKAGKV---------PKDRRRPAVIRE-PHERKILALLDAL----STV 1217
Query: 533 NGKTSKTKQLQRVANNAIDAVQKHF-TKDPPKQVATRAQNGILKNFERKDKLKEQNLSNG 709
+ + K + QR +N ++HF K ++ + Q + K R KE+
Sbjct: 1218 HSQKMKKAKEQRHLHN-----KEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKS 1272
Query: 710 SVKSARSDV 736
S+K A +
Sbjct: 1273 SLKGAEGQL 1281
>AF197927-1|AAF18981.1| 1163|Homo sapiens AF5q31 protein protein.
Length = 1163
Score = 30.7 bits (66), Expect = 7.9
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Frame = +2
Query: 269 SHGITTRSKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFGDITN-------AYNKS 427
SHG + ++ S K+H LKIP++ S DV+ ++T+ A +
Sbjct: 279 SHG-NSMTELKPSSKAHLTKLKIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTP 337
Query: 428 CAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKT--KQLQRVANNAIDAVQK 601
C + P K+ + ++ + + + T NG SK+ K +++++ ++
Sbjct: 338 CKTEPSKFPFPTKE-SQQSNFGTGEQKRYNPSKTSNGHQSKSMLKDDLKLSSSEDSDGEQ 396
Query: 602 HFTKDPPKQVATRAQNGILKNFERKDKLKEQNLS-NGSVKSARSDVSGEPSLYMTALENI 778
K P+ N E D ++ + S +GS S+ SD E S + E
Sbjct: 397 DCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESS--SSDSEAN 454
Query: 779 SPSEVTKEEYKQISEKLNKVNLDDTSRSWMXNRDPHKL 892
PS+ E + NK LD +W+ +PHK+
Sbjct: 455 EPSQSASPEPE--PPPTNKWQLD----NWLNKVNPHKV 486
>AB209547-1|BAD92784.1| 907|Homo sapiens ALL1 fused gene from 5q31
variant protein.
Length = 907
Score = 30.7 bits (66), Expect = 7.9
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Frame = +2
Query: 269 SHGITTRSKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFGDITN-------AYNKS 427
SHG + ++ S K+H LKIP++ S DV+ ++T+ A +
Sbjct: 286 SHG-NSMTELKPSSKAHLTKLKIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTP 344
Query: 428 CAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKT--KQLQRVANNAIDAVQK 601
C + P K+ + ++ + + + T NG SK+ K +++++ ++
Sbjct: 345 CKTEPSKFPFPTKE-SQQSNFGTGEQKRYNPSKTSNGHQSKSMLKDDLKLSSSEDSDGEQ 403
Query: 602 HFTKDPPKQVATRAQNGILKNFERKDKLKEQNLS-NGSVKSARSDVSGEPSLYMTALENI 778
K P+ N E D ++ + S +GS S+ SD E S + E
Sbjct: 404 DCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESS--SSDSEAN 461
Query: 779 SPSEVTKEEYKQISEKLNKVNLDDTSRSWMXNRDPHKL 892
PS+ E + NK LD +W+ +PHK+
Sbjct: 462 EPSQSASPEPE--PPPTNKWQLD----NWLNKVNPHKV 493
>AB051476-1|BAB21780.3| 2627|Homo sapiens KIAA1689 protein protein.
Length = 2627
Score = 30.7 bits (66), Expect = 7.9
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 434 PQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTK 613
PQ M V T P + + S+TS+ S+ + + + ++ +
Sbjct: 2464 PQLPQDEMIVSDKEERTDAAPKSQQMDSRTSSSKASLSRPGR-RPLGFLSLICSKNSLES 2522
Query: 614 DPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSAR--SDVSGEPSLYMTALENISPS 787
D P QV ++ + L RK KLK N N S + R SD+ PS+ T ENIS S
Sbjct: 2523 DEPMQVHSKKRLKPLIPGLRK-KLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSS 2581
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,247,318
Number of Sequences: 237096
Number of extensions: 2615639
Number of successful extensions: 9774
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9771
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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